Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe05g00016 | ATGTTGATCAAAATGGAAGGGTTGTTGCAGTTGGCGGTGCAATCCGTGGAGTGGACTTACTCTCTCTACTGGCGATTCTCCACTCAACACCGGGTGTTGGTTTGGGGAGATGGGTTCTACAACGGACCCATCAAGACCACCAAGACGTTGCACCCCGCAGCTGCCACCGACTTCACCGGCCACCACCAGCAGCAGCAGCAACAACAACTACAACTACAACTACAAGCAGCCTCTCTGTCTCTTCAAAGAACCCATCAGCTCAGGGATCTTTACAACTCCTTATCCGCCGCCGACAGTAGCACTCACACCCACCCCCTCCGCCGCCCCTCTGCCGCCCTCTCTCCCGAGGACTTGACGGAGTCCGAGTGGTTCTATTTGTTGTGTCTCTCTTTCTCTTTTCCTCCGGGACTCGGATTGCCTGGGAAGGCATTTGCGAAGAACAAACATGTGTGGATTACAGGTGCTAATGAGATTGATAGCAAAATTTTCTCCAGAGCTATTCTTGCTAAG | 510 | 52.55 | MLIKMEGLLQLAVQSVEWTYSLYWRFSTQHRVLVWGDGFYNGPIKTTKTLHPAAATDFTGHHQQQQQQQLQLQLQAASLSLQRTHQLRDLYNSLSAADSSTHTHPLRRPSAALSPEDLTESEWFYLLCLSFSFPPGLGLPGKAFAKNKHVWITGANEIDSKIFSRAILAK | 170 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 64191 | 64921 | + | Cp4.1LG05g01810.1 | Cpe05g00016 | 469221 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe05g00016 | 170 | Pfam | bHLH-MYC and R2R3-MYB transcription factors N-terminal | 9 | 170 | IPR025610 | - | |
Cpe05g00016 | 170 | PANTHER | TRANSCRIPTION FACTOR TT8 | 9 | 170 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe05g00016 | Cpe-Chr5:64191 | Cpe12g00368 | Cpe-Chr12:2613869 | 2.39E-37 | dispersed | |
Cpe05g00016 | Cpe-Chr5:64191 | Cpe14g00960 | Cpe-Chr14:8090753 | 1.12E-14 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe05g00016 | - | - | cmos:111437375 | 320.087 |