Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe05g00016 ATGTTGATCAAAATGGAAGGGTTGTTGCAGTTGGCGGTGCAATCCGTGGAGTGGACTTACTCTCTCTACTGGCGATTCTCCACTCAACACCGGGTGTTGGTTTGGGGAGATGGGTTCTACAACGGACCCATCAAGACCACCAAGACGTTGCACCCCGCAGCTGCCACCGACTTCACCGGCCACCACCAGCAGCAGCAGCAACAACAACTACAACTACAACTACAAGCAGCCTCTCTGTCTCTTCAAAGAACCCATCAGCTCAGGGATCTTTACAACTCCTTATCCGCCGCCGACAGTAGCACTCACACCCACCCCCTCCGCCGCCCCTCTGCCGCCCTCTCTCCCGAGGACTTGACGGAGTCCGAGTGGTTCTATTTGTTGTGTCTCTCTTTCTCTTTTCCTCCGGGACTCGGATTGCCTGGGAAGGCATTTGCGAAGAACAAACATGTGTGGATTACAGGTGCTAATGAGATTGATAGCAAAATTTTCTCCAGAGCTATTCTTGCTAAG 510 52.55 MLIKMEGLLQLAVQSVEWTYSLYWRFSTQHRVLVWGDGFYNGPIKTTKTLHPAAATDFTGHHQQQQQQQLQLQLQAASLSLQRTHQLRDLYNSLSAADSSTHTHPLRRPSAALSPEDLTESEWFYLLCLSFSFPPGLGLPGKAFAKNKHVWITGANEIDSKIFSRAILAK 170
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 64191 64921 + Cp4.1LG05g01810.1 Cpe05g00016 469221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe05g00016 170 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 9 170 IPR025610 -
Cpe05g00016 170 PANTHER TRANSCRIPTION FACTOR TT8 9 170 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g00016 Cpe-Chr5:64191 Cpe12g00368 Cpe-Chr12:2613869 2.39E-37 dispersed
Cpe05g00016 Cpe-Chr5:64191 Cpe14g00960 Cpe-Chr14:8090753 1.12E-14 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe05g00016 - - cmos:111437375 320.087