Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe05g00076 ATGAAAGATCTTTGGCTGCTGTCAAACAATATGAAGAGTGATGTTAAGATAAAATGGCGGCGGAGAGCTGGAAAAGGGGAGAACATTAGGAAGATAATGAAGTGTTTATGTTCTGGAGAGAAAAGAGCTGGTGATGGTATGATTCCTGCATCAGAATTGCAGTCAACTTTGGAGAATTCAGCAAGCGAACACTCCTCACGAATCGGCGGGACTGTCATGAAGCCAGAAATTGGCAATATAGAAGAAGCCGAGTCTTCGCTTCGTGAGAGCGGTTGCTTGAATTATGAGGAAGCAAGAGCATTGCTGGGAAGATATGAATATCAAAAAGGAAACATTGAAGCTGCTCTTCATGTATTTGAAGGAATAGATATCACTGCAGTAACTAGTAAGATAATGACCTCCATTGCTAGAACAGGACACCGTCCAAGGAGACGATCGCAACGTTTTAGTGACCCACCAATGTCTATGCATGCTGTCAGTTTACTGTTGGAAGCCATCTTTCTAAAAGCAAAATCCTTGCAAGGCCTTGGGAGGTTTGGAGAAGCTGCTCAATCTTGCAAAGTTATTCTGGACATACTTGAATCTTCATTTCCCGAAGGGTTGCCTGAAAACTTTGGTGCTGATTGTAAATTGCAGGACACAGTAACGAAAGCTGTTGAGCTGATACCAGAACTATGGAAACAAGGCGATTCTTCTCAAGAAGCGATCCTTTCATATCGGCGGGCACTCCTTCATCAATGGAACCTCGATGCGGGAACCACCGCTCGAATTCAGAAAGAGTTTGCCATTTTTCTTCTGTACAGTGGAAATGAAGCATACCCTCCAAATCTCCGGTCTCAAATGGACAGCTCATTTGTACCAAAAAACAATTATGAAGAAGCTATACTCTTATTTATGATACTACTTAGAAAAGTTGTTCTTAAGAGGATTGATTGGGATCCATCAATCTTGGATCACCTCTCCTTTGCACTAACAATATCAGGGGATACAAGCGCTTTGGCAGGTCAAGTAGAGGAATTGCCTCCTGGGATTCTACATCGAAACGATAGGTACCATACTCTCGCTCTTTGTTACTATGGAGCTGGAGAAGACTTGGCTGCTTTGAATCTTCTGAGGAAATTGTTGGGCAGTCATGAGGATCCTAAATCTCTTCCTGCTTTATTAATGGCGTCAAAGATTTGTGGAGAGCACAGTGATCATGCTGAAGAAGGAACACGTTATGCTCGTCGAGCTCTTCAAAACTTGGATGCTGGATGTGATCAACTGATAGGTGTTGCCAACTGTTTGTTGGGTGTCTCTCTGTCTGTATATTCTAAATCAGCAGTTGTAGATTCTGAGCGGTCCTCCAGACAATCTGAGGCGATAGAGGCCCTGGAAGCTGCACGGAAGAAGACTCGAATGACCGATCCTAATGTTCTCTACCATTTGAGTGTTGAATATGCTGATGAGAGGAAGTTGGATTCAGCACTTCATTTTGCAAAGAAGTGTCTCAAACTGGAAGGTGGATCTAATATTAGAACTTGGTTACTGGTGGCTCGGATACTCTCTGCCCTGAAACGATTCGTGGATGGCGAAGGTATTATAAATGCAGCTCTGGAGCAGACTGGGAAATGGGATCAAGGCGAATTGCTTCGAACAAAAGCAAAGCTTCTGATAGCACAAGATGAGCTGAAAGGTGCTATTGGGACTTATACTCAGTTACTCGCTGTTTTTCAAGTTCAGAGTAAAAGTTTTGGCTTGGGAGATAAGAAGCTACATAAGAACAGCAGAAATTGTATCAGAAGCTTGCAATTGGAAGTGTGGCATGATTTAGCTCTAGTCTATATAAGGCTTTCACAATGGCACAATGCCGAGGCTTGCCTTTCCAAGTCAAAGGCCATCCATTCTCATTCGGCATCTAGATGTCATCTCACAGGTATGCTTTATGAAGCAAAAGGATTGTATAAAGAAGCTTTGAAGGCTTTTATGGCTGCTCTGGACATCGATCCCGTTCATGTCCCGAGCTTGGTTTCGTCTGCCGTAGTTCTCAGACGTCTCGGCCACCAATCGCACCCCGTTGTTCGCAGCTTTTTGATGGATGCTATACGTCTCAACCAGACAAACCACGCTGCGTGGTACAATCTCGGGCTATTCTACAGAGCTGAAGGAACCAAATCTTCATTGGCTGAAGCTGTTGAATGTTTTGAGGCTGCAACATTTCTTGAAGAGACTGCTCCTGTTGAATCCTTCAGATAA 2235 43.67 MKDLWLLSNNMKSDVKIKWRRRAGKGENIRKIMKCLCSGEKRAGDGMIPASELQSTLENSASEHSSRIGGTVMKPEIGNIEEAESSLRESGCLNYEEARALLGRYEYQKGNIEAALHVFEGIDITAVTSKIMTSIARTGHRPRRRSQRFSDPPMSMHAVSLLLEAIFLKAKSLQGLGRFGEAAQSCKVILDILESSFPEGLPENFGADCKLQDTVTKAVELIPELWKQGDSSQEAILSYRRALLHQWNLDAGTTARIQKEFAIFLLYSGNEAYPPNLRSQMDSSFVPKNNYEEAILLFMILLRKVVLKRIDWDPSILDHLSFALTISGDTSALAGQVEELPPGILHRNDRYHTLALCYYGAGEDLAALNLLRKLLGSHEDPKSLPALLMASKICGEHSDHAEEGTRYARRALQNLDAGCDQLIGVANCLLGVSLSVYSKSAVVDSERSSRQSEAIEALEAARKKTRMTDPNVLYHLSVEYADERKLDSALHFAKKCLKLEGGSNIRTWLLVARILSALKRFVDGEGIINAALEQTGKWDQGELLRTKAKLLIAQDELKGAIGTYTQLLAVFQVQSKSFGLGDKKLHKNSRNCIRSLQLEVWHDLALVYIRLSQWHNAEACLSKSKAIHSHSASRCHLTGMLYEAKGLYKEALKAFMAALDIDPVHVPSLVSSAVVLRRLGHQSHPVVRSFLMDAIRLNQTNHAAWYNLGLFYRAEGTKSSLAEAVECFEAATFLEETAPVESFR 744
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 372927 377489 + Cp4.1LG05g01150.1 Cpe05g00076 469281
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cpe05g00076 744 PANTHER PROTEIN NPG1 23 744 IPR043376 -
Cpe05g00076 744 PANTHER PROTEIN NPGR2 23 744 - -
Cpe05g00076 744 SUPERFAMILY TPR-like 350 572 IPR011990 GO:0005515
Cpe05g00076 744 SUPERFAMILY TPR-like 542 716 IPR011990 GO:0005515
Cpe05g00076 744 SMART tpr_5 470 503 IPR019734 GO:0005515
Cpe05g00076 744 SMART tpr_5 702 738 IPR019734 GO:0005515
Cpe05g00076 744 SMART tpr_5 541 574 IPR019734 GO:0005515
Cpe05g00076 744 SMART tpr_5 163 196 IPR019734 GO:0005515
Cpe05g00076 744 SMART tpr_5 505 538 IPR019734 GO:0005515
Cpe05g00076 744 SMART tpr_5 598 631 IPR019734 GO:0005515
Cpe05g00076 744 SMART tpr_5 632 665 IPR019734 GO:0005515
Cpe05g00076 744 Pfam Tetratricopeptide repeat 634 664 IPR019734 GO:0005515
Cpe05g00076 744 Gene3D Tetratricopeptide repeat domain 582 738 IPR011990 GO:0005515
Cpe05g00076 744 ProSiteProfiles TPR repeat profile. 632 665 IPR019734 GO:0005515
Cpe05g00076 744 Gene3D Tetratricopeptide repeat domain 72 578 IPR011990 GO:0005515
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Cpe05g00076 Cpe15g00093 CCT
Cpe05g00076 Cpe15g00093 ECH
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g00076 Cpe-Chr5:372927 Cpe06g00565 Cpe-Chr6:3416728 0 dispersed
Cpe15g00093 Cpe-Chr15:703413 Cpe05g00076 Cpe-Chr5:372927 0 wgd
Cpe03g01531 Cpe-Chr3:11950278 Cpe05g00076 Cpe-Chr5:372927 2.06E-16 wgd
Cpe05g00076 Cpe-Chr5:372927 Cpe08g00348 Cpe-Chr8:2168722 0 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe05g00076 K21843 - csv:101223229 1218.76