Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe05g00090 ATGGGTTCGGTGAAGAAGACGATGAAGTCGAAAACCCAGATTTTGGTTTGTGTGTTCTTGTACTGTTGGATTGGTTTTTGTACTGAGTGTTCTGCTGCTGCGTTTAGTGAAGAAGCTTTGGCTTTGGTTTCGTTTAAATCAGGGCTTGTTGATCCGTTGAAGTGGCTTAGAGATTGGAAGCTGGGCGATGGAGATGGTAGATTTGCAGGGCACTGTAACTGGACTGGTGTTTCTTGCAACTCAGATGGAGCAGTTGAGAAACTGAGCCTTTCTCGTATGAATCTCAGCGGCATTTTGTCGAACGACTTGCCTGCACTATCAAGACTCAGTTCTCTTGACTTGAGTTGCAATGAATTCTCCTCCTCTTTGCCAAAATCTATTGGAAATCTCACTTCCTTGATGAGTTTTGATGTGAGTCAAAACTCTTTTGTTGGTGAGATTCCGGTGGGGTTTGGGGAGATGGTTGAATTGAAGAACTTCAATGCCTCAAGCAACAATTTCTCTGGTTTAATCCCTGAAGATCTTGGAAATGCAACTCAGCTGGAGATTTTGGATCTCCGAGGGAGTTTTCTTGAAGGGTCAATTCCTGTATCTTTCAAGAACTTGCAGAAGTTGAAGTTTCTTGGACTTTCTGGGAACAGTCTCACCGGTCGAATCCCGGCCGAGATCGGTCAGATGTCGTCGTTAGAGACGGTTATTATTGGATACAACAAGTTTGAAGGAGGGATTCCATCAGAATTTGGAAATCTCACCAATCTGAAGTATCTTGATTTGGCTGTCGGAAAACTTGGTGGTGGCATTCCAGCTGAGCTTGGGAGGCTTAAACAGCTTGAGACATTGTTCCTTTATAAGAACGAATTCAAGGATCGAATTCCATCGTCGATCGGCAATGCTACTTCATTAGTGTTTCTTGATCTTTCAGACAACAAATTGACTGGGGAAATCCCTGCTGAGGTTACTGAATTGAAGAACCTGCAGCTGCTGAATCTAATGTGTAACAAGCTGTCTGGTGAAGTACCTCCAGGGATTGGAGGGTTAACAAAATTACAGGTTCTGGAGCTATGGAACAACTCCTTTTCGGGCGAATTACCGGGCGATCTCGGTAAGAACTCGGAGTTGGTTTGGTTGGATGTCTCATCCAATTCATTCTCTGGTCCGATTCCTCCTTCGTTATGCAATTGGGGTAATCTAACCAAGCTTATCCTTTTCAACAATGCCTTTTCGGGTCCGATTCCGATTGGATTATCGTCGTGTTCATCGCTCGTTCGTGTTCGAATGCAGAACAATTTTGTATCGGGTACAATCCCAGTTGGTTTTGGGAAGCTTGGGAAGCTTGAAAGGCTAGAATTAGCAAATAATAGTCTCATTGGCAGCATCCCAAGTGATATGTCATCTTCTAAATCGCTTTCTTTTATTGATCTCTCTGAAAATAGCCTCCATTCTCCTCTTCCTTCCTCAATTCTTTCCATTCCAAATCTTCAAACTTTTATAGTCTCTGATAATCATTTAGAAGGTGAAATCCCAGACCAGTTCCAGGAGTGTCCTGCACTATCTGTTCTTGATCTCTCTTCAAACCATTTCACAGGCAACATTCCGGAAAGCATTGCTTCATGTGAGAGATTGGTAGCTCTGAATCTCAGAAACAATCAATTAACTGGAGAAATCCCAAAACAGATTGCAAATATGCCTTCATTGGCGGTTCTTGATCTATCCAACAACTCTCTTACAGGTAGAATACCGAATAATTTCGGTATCTCTCCCGCGCTTGAATCGTTTAATGTATCGTACAATAAGCTCGAGGGTCCAGTGCCATTAAATGGTGTGTTAAGAACAATCAATCCAAGTGATCTTCAGGGCAATGCTGGTTTATGTGGAGCTGTCCTACCTCCATGTTCACCAAATTCAGCATTCACATCAGGGCACAGCAACTCACGCTCGGCGCACATTATCGCCAGTTGGGTCATCGGAATATCGTCTGTTTTAGCAATATGTATCGCTCTTTTCGGTGTTCGATCATTGTACAAGAGGTGGTACTCGACTGGAAGTTGCTTTGAAGGGCGATATGAAATGGGTGGCGGAGATTGGCCATGGAGATTGATGGCATTCCAAAGGCTTGGATTCACAAGTACTGATATTTTGGCTTGCATTAAGGAATCAAATGTGATTGGAATGGGAGCGACTGGGATTGTTTATAAAGCTGAAATGCCACAGATAAAGACAGCTGTGGCTGTAAAAAAGCTATGGAGATCAGAACCAGATCTTGAAATGGGAAGCAGTGAAGGTCTAGTAGGAGAAGTGAATTTATTGGGGAAGTTAAGGCACAGGAACATAGTTCGATTACTCGGGTTTATGCACAACGATGTCGATGTAATGATCGTCTACGAGTTTATGCAAAATGGAAGCCTTGGAGAAGCCTTGCATGGTAAACAAGCAGGGAGGCTGCTAGTAGACTGGGTTTCAAGGTACAACATAGCAATTGGAGTGGCACAGGGTTTAGCTTATCTCCACCATGATTGTGACCCACCCATCATTCATCGCGACGTTAAGCCAAACAATATACTTCTCGATTCAAATCTCGAAGCACGGTTAGCTGATTTCGGGTTGGCGCGAATGATGGCTCGTAAAAACGAGACGGTTTCAATGGTAGCTGGATCGTATGGCTACATTGCCCCCGAATATGGATACACTTTAAAGGTGGATGAAAAGATCGACATTTACAGCTACGGCGTTGTTCTTTTGGAGCTGTTGACGGGGAAGAAGCCATTAGATTCCGAGTTCGGAGAATCGGTGGACATTGTTGAATGGATTAGAAGGAAGGTTAGAGACAACAGACGTTTAGAAGAAGCATTAGATCCAAATCTGGGAAATTTCAAGCATGTTCAAGAAGAAATGCTGTTTGTGCTTAGAATTGCTCTTCTCTGCACTGCAAAGCATCCAAAAGACAGGCCTTCCATGAGAGATATAATAACAATGCTTGGAGAAGCAAAACCAAGGAGAAAAAGCAACAGTAATGGCAATGAAGGATTTGGAACTAACAAAGACAAAGACAAAGACAAAGAGAAGCCAGTTTTCAACACCTCCCCTGTAAATGGCCTTCTCTAG 3102 43.26 MGSVKKTMKSKTQILVCVFLYCWIGFCTECSAAAFSEEALALVSFKSGLVDPLKWLRDWKLGDGDGRFAGHCNWTGVSCNSDGAVEKLSLSRMNLSGILSNDLPALSRLSSLDLSCNEFSSSLPKSIGNLTSLMSFDVSQNSFVGEIPVGFGEMVELKNFNASSNNFSGLIPEDLGNATQLEILDLRGSFLEGSIPVSFKNLQKLKFLGLSGNSLTGRIPAEIGQMSSLETVIIGYNKFEGGIPSEFGNLTNLKYLDLAVGKLGGGIPAELGRLKQLETLFLYKNEFKDRIPSSIGNATSLVFLDLSDNKLTGEIPAEVTELKNLQLLNLMCNKLSGEVPPGIGGLTKLQVLELWNNSFSGELPGDLGKNSELVWLDVSSNSFSGPIPPSLCNWGNLTKLILFNNAFSGPIPIGLSSCSSLVRVRMQNNFVSGTIPVGFGKLGKLERLELANNSLIGSIPSDMSSSKSLSFIDLSENSLHSPLPSSILSIPNLQTFIVSDNHLEGEIPDQFQECPALSVLDLSSNHFTGNIPESIASCERLVALNLRNNQLTGEIPKQIANMPSLAVLDLSNNSLTGRIPNNFGISPALESFNVSYNKLEGPVPLNGVLRTINPSDLQGNAGLCGAVLPPCSPNSAFTSGHSNSRSAHIIASWVIGISSVLAICIALFGVRSLYKRWYSTGSCFEGRYEMGGGDWPWRLMAFQRLGFTSTDILACIKESNVIGMGATGIVYKAEMPQIKTAVAVKKLWRSEPDLEMGSSEGLVGEVNLLGKLRHRNIVRLLGFMHNDVDVMIVYEFMQNGSLGEALHGKQAGRLLVDWVSRYNIAIGVAQGLAYLHHDCDPPIIHRDVKPNNILLDSNLEARLADFGLARMMARKNETVSMVAGSYGYIAPEYGYTLKVDEKIDIYSYGVVLLELLTGKKPLDSEFGESVDIVEWIRRKVRDNRRLEEALDPNLGNFKHVQEEMLFVLRIALLCTAKHPKDRPSMRDIITMLGEAKPRRKSNSNGNEGFGTNKDKDKDKEKPVFNTSPVNGLL 1033
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 430776 435515 - Cp4.1LG05g00870.1 Cpe05g00090 469295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe05g00090 1033 SUPERFAMILY RNI-like 267 604 - -
Cpe05g00090 1033 PANTHER UNNAMED PRODUCT 26 1006 - -
Cpe05g00090 1033 ProSitePatterns Protein kinases ATP-binding region signature. 722 746 IPR017441 GO:0005524
Cpe05g00090 1033 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 26 1006 - -
Cpe05g00090 1033 PRINTS Leucine-rich repeat signature 301 314 - -
Cpe05g00090 1033 PRINTS Leucine-rich repeat signature 562 575 - -
Cpe05g00090 1033 Pfam Leucine rich repeat N-terminal domain 37 80 IPR013210 -
Cpe05g00090 1033 Gene3D Ribonuclease Inhibitor 34 189 IPR032675 -
Cpe05g00090 1033 Pfam Leucine rich repeat 491 551 IPR001611 GO:0005515
Cpe05g00090 1033 SUPERFAMILY Protein kinase-like (PK-like) 714 992 IPR011009 -
Cpe05g00090 1033 Gene3D Ribonuclease Inhibitor 373 635 IPR032675 -
Cpe05g00090 1033 Pfam Leucine Rich Repeat 565 583 IPR001611 GO:0005515
Cpe05g00090 1033 Pfam Leucine Rich Repeat 180 202 IPR001611 GO:0005515
Cpe05g00090 1033 Pfam Protein kinase domain 718 989 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe05g00090 1033 ProSiteProfiles Protein kinase domain profile. 716 999 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe05g00090 1033 SMART serkin_6 716 992 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe05g00090 1033 Gene3D Phosphorylase Kinase; domain 1 716 800 - -
Cpe05g00090 1033 Gene3D Transferase(Phosphotransferase) domain 1 801 1019 - -
Cpe05g00090 1033 Gene3D Ribonuclease Inhibitor 293 372 IPR032675 -
Cpe05g00090 1033 SUPERFAMILY L domain-like 71 361 - -
Cpe05g00090 1033 MobiDBLite consensus disorder prediction 993 1033 - -
Cpe05g00090 1033 ProSitePatterns Serine/Threonine protein kinases active-site signature. 843 855 IPR008271 GO:0004672|GO:0006468
Cpe05g00090 1033 Gene3D Ribonuclease Inhibitor 190 292 IPR032675 -
Cpe05g00090 1033 SMART LRR_typ_2 322 345 IPR003591 -
Cpe05g00090 1033 SMART LRR_typ_2 346 370 IPR003591 -
Cpe05g00090 1033 SMART LRR_typ_2 442 466 IPR003591 -
Cpe05g00090 1033 SMART LRR_typ_2 274 298 IPR003591 -
Cpe05g00090 1033 SMART LRR_typ_2 202 226 IPR003591 -
Cpe05g00090 1033 SMART LRR_typ_2 106 130 IPR003591 -
Cpe05g00090 1033 SMART LRR_typ_2 562 586 IPR003591 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00927 Cpe-Chr2:7475334 Cpe05g00090 Cpe-Chr5:430776 1.21E-31 dispersed
Cpe04g01593 Cpe-Chr4:12403043 Cpe05g00090 Cpe-Chr5:430776 4.51E-07 dispersed
Cpe05g00090 Cpe-Chr5:430776 Cpe07g01136 Cpe-Chr7:9964265 0 dispersed
Cpe06g00486 Cpe-Chr6:2869084 Cpe05g00090 Cpe-Chr5:430776 2.43E-123 dispersed
Cpe06g00491 Cpe-Chr6:2908872 Cpe05g00090 Cpe-Chr5:430776 7.48E-141 dispersed
Cpe08g01262 Cpe-Chr8:9123959 Cpe05g00090 Cpe-Chr5:430776 8.79E-126 dispersed
Cpe10g00650 Cpe-Chr10:3742794 Cpe05g00090 Cpe-Chr5:430776 3.57E-119 dispersed
Cpe13g01035 Cpe-Chr13:8499842 Cpe05g00090 Cpe-Chr5:430776 1.36E-116 dispersed
Cpe14g00170 Cpe-Chr14:942761 Cpe05g00090 Cpe-Chr5:430776 4.08E-147 dispersed
Cpe18g00398 Cpe-Chr18:5198861 Cpe05g00090 Cpe-Chr5:430776 1.34E-18 dispersed
Cpe18g00880 Cpe-Chr18:8002077 Cpe05g00090 Cpe-Chr5:430776 2.49E-08 dispersed
Cpe01g01686 Cpe-Chr1:10756721 Cpe05g00090 Cpe-Chr5:430776 2.87E-53 transposed
Cpe11g01032 Cpe-Chr11:8687849 Cpe05g00090 Cpe-Chr5:430776 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62386 PF00069 Pkinase 2.70E-48 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe05g00090 - - cpep:111794871 2019.97