Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe05g00119 ATGTTAAGATTCATGATCACAACAACCCCACTTTCCACTTCCCTTCAAAACCTAAAGAAACAGAGCCCTTTTGGTGCAAGAGGAAAACAGGAAAGAATTGTCTGCCACTGCCAGATTACACAAACTTCTCTATCTCTATCTCTCTCCCTCTTCCAAGCTGCGACGATGGTTGGTAGCACCGTGTTCACTTTGGCTGAGGTTGCCTCCCACGACAACCGCAACGACTGCTGGTTGATCATTGAGGACAAGTTCCTTGAAGACCATCCTGGTGGTGATGAAGTCTTGTTGTCAGCCATTGGTAAGGATGCAACCAATGATTTTTTCGATGTCGGGCACAGTAGTGCTGCTCGAGCGATGATGGAAGAATTTTACGTCGGCGACATCGATAGCTCAACTATCCCTACAAAAAGGAAGTACACTCCTCCAAAGCAGCCCCTATACAACCAAGACAAGACACCAGAGTTCATTATCAAGGTCCTCCAGTTTCTAGCTCCCCTGGTAATTTTGGCATTGGCTTTTGGCATCCATCTCTATACCAAAACAACATGA 549 46.08 MLRFMITTTPLSTSLQNLKKQSPFGARGKQERIVCHCQITQTSLSLSLSLFQAATMVGSTVFTLAEVASHDNRNDCWLIIEDKFLEDHPGGDEVLLSAIGKDATNDFFDVGHSSAARAMMEEFYVGDIDSSTIPTKRKYTPPKQPLYNQDKTPEFIIKVLQFLAPLVILALAFGIHLYTKTT 182
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 621104 625969 - Cp4.1LG05g00580.1 Cpe05g00119 469324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe05g00119 182 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 60 139 IPR036400 -
Cpe05g00119 182 PANTHER CYTOCHROME B5 59 180 - -
Cpe05g00119 182 Gene3D - 58 132 IPR036400 -
Cpe05g00119 182 PRINTS Cytochrome B5 signature 116 128 IPR001199 -
Cpe05g00119 182 PRINTS Cytochrome B5 signature 88 102 IPR001199 -
Cpe05g00119 182 PRINTS Cytochrome B5 signature 103 110 IPR001199 -
Cpe05g00119 182 PRINTS Cytochrome B5 signature 78 88 IPR001199 -
Cpe05g00119 182 PANTHER - 59 180 - -
Cpe05g00119 182 Pfam Cytochrome b5-like Heme/Steroid binding domain 63 128 IPR001199 -
Cpe05g00119 182 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 59 129 IPR001199 -
Cpe05g00119 182 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 84 91 IPR018506 GO:0020037
Cpe05g00119 182 SMART Cyt_b5_2 62 129 IPR001199 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g00119 Cpe-Chr5:621104 Cpe05g00584 Cpe-Chr5:3539455 6.47E-53 dispersed
Cpe12g00095 Cpe-Chr12:569324 Cpe05g00119 Cpe-Chr5:621104 6.87E-55 wgd
Cpe15g00137 Cpe-Chr15:1084099 Cpe05g00119 Cpe-Chr5:621104 1.68E-79 wgd
Cpe03g01589 Cpe-Chr3:12270252 Cpe05g00119 Cpe-Chr5:621104 2.81E-57 wgd
Cpe05g00119 Cpe-Chr5:621104 Cpe08g00396 Cpe-Chr8:2509521 1.10E-59 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe05g00119 K23490 - csv:101212882 235.728