Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe05g00138 ATGTTTGATTTCATCATTTTCTTCTTCTTTATTCTCCTGGCTCCTTGTAAATCTTCTGAAATTTCTGCAGCTGCTCGGAGATTGCTTCACCAGCCCTTTTTCCCGTATGATTCTGTGCCTCCGGCGGAGCTCCCGTCGCTTCCGGTACCACCGCCGCCGGATCCCAAATACCCATTTTCCACTACCCCTCCTGCAACTCCGGATGGGTCTCCATTCTTTCCGACGTATCCAGGAACTCCTCCTCCGCCTACGCCTGCGAGCATTGCAACGTTTCCGGCGAATATTTCTTCTCTGATTCTCCCTCGTTCGTCTCCGTCTGGTTCCAGTTCTAAGAAGCTTGTTCCATTGGTTGTTGCTGCGGTTGTTTCTGTTGTTTTGGTTGTTTGCATTGCTGGGTTTTTGTACTGGCGGCGGCGTAGTCGCCGTGGGTTGGCTGAGGATAAGACGTTCAGATCCGAAAGTAGTAGCCGGTTGTGTCCGGTTCCGAGTGTTGAAGTCGGTAATGGAATTCCTAAGTTGAGACATCCTTCTGCTTCTAGCTCTGAGTTTCTGTATTTGGGTACTCTTGTGAACTCGAGAGGAATCAACGATCGTTCCGTTGGGGGAGCTCGTGTGGCTGATCCTAGGCCGTTGGATTCGCCAGAGCTTCATCCGCTTCCGCCGCTGAACTTCGGTCGGTCGAATGAGAAGCAAAACGGTGGAAATGAAGATGAGAGATCGATGGGAGATGAAGAGGAGGAGGAATTTTATTCTCCAAAAGGTTCTCTCGGCGCGATTGGCTCGGGATCTCGAAGAGTGCTCGCAACAATGGCGGCTGAAGATTTGCTTGGCAAAACCAGCGATTCGAGCTCCACTTCGTATTCCACATCCAGCGGTTCGGTTTCGCCGGCGAGATCACGTTCTAAGAGTCTTTCTCTATCTCCACCGGCGAGTTTGAGCCCTAGAAGATCTGTTCAAAACGACTCTTCTCATTTCTCTGTTTCTGCTACTGTAGCGACGGAGCAGCTTTCGCCACCATTGACGCCGCCTCTTTCCCACGGCGGAGGGGAATCGGACGATGGCGGAAAATCTCATTGCCCTTCTCCATTGCGTTTATCGACGGAGAAAGCTCCGGAGAAGAGCTCCACCGCGTCTTCCTCCCGGAGATTTTCTAATGCTTCAGTTCACAGTGCGATGTTACCAATTTCAGCAACCAACAAGGATTTGGATAATCATGATGAAACGAACAATAATCACGAAGAACAATCTCCAAGACAATCACATAGTTCAGATCCTGATCAGTTTCCTTCTTCTCCTTGTTTATCTCCACTTTCCGATGGAATTTTGGGGAAAGTTCAAATTCAATCGCCGACAGTTTCAAACGTTCGCGACTCGGATTCTGATGCGAAATTTAAGCAACTTCCTTACTCATTTACTTCATCTTCACCTTCATCATCACCGGAGAGAGTAGTTCTGGACTCATCTCCGTCAAGAACATCCATTATTTCCGATCAAAACAGGTCGTCACCGTCACCACCATCACCGGAGAGAATTCTGATGAGTGATTCAGATTCATCAAGGAGAACTTTCGACCACTTTGATCAAGATCTTCAATCTTCTTCTGCAGACATCATTTCTACTGATGTGGATCGACTGCAATCTCCTTCGGGCGTCCCTGCCGCTCCTCCGCCACCGCCACCGCCGCCACCACCACTTGCAGCACCTCCTCCACCTATACGTTGTGAAATGCCCATTTCACCTTCAACACCAGTAGGCCAATCCATTCCAATGGCGCCTCCTCCATTAGTGCCTCCATTAAGGCCATTTATAATAGACACTGTGAAAAATGTCTCACCAGTTCAGCTGCCTTCCTGCAATGGCGAATCATCTGAAGACACTCCAAAGCCCAAGTTGAAGCCATTGCATTGGGACAAAGTGAGGGCGAGCTCCGATCGCGAGATGGTGTGGGATCAGCTCAGATCAAGCTCTTTTAAAGTGAATGAGGAAATGATCGAAACTCTGTTTGTTGTGAACACTTCCAACTCGAAGGAAACAACTCCACGCCCCGTGCTTCCTACACCTAACCAAGAGATCGGAGTTCTCGATCCCAAAAAGTCGCAGAACATCGCCATTGCACTACGGGCACTTAACGTGACCATAGAAGAAGTTTGTGAAGCTCTTTTAGAAGGTAATGCTGATGCACTTGGATTGGACCTACTTGAAAGTTTATTGAAGATGGCTCCAACAAAAGAGGAAGAACGTAAGCTAAAGGCATCCAAGGATGTCTCACCTACCAAGCTTGGCCCTGCCGAGAAATTTTTGAAGGCAGTTCTTGATGTTCCTTTTGCGTTTAAAAGGGTGGATGCGATGCTTTACATGGCAAACTTTGAGTCCGAGATCGAGTACTTAAAGAAGTCGTTTGAAAATCTCGAGACTGCCTGCGAGGAATTGAGGAATAGCAGGATGTTCTTGAAACTCTTGGAAGCTGTGCTCAAAACGGGGAATCGCATGAACGTTGGCACGAATCGTGGGGAGGCACAAGCCTTCAAACTCGACACACTTCTAAAGCTCGTCGATGTCAAGGGTGCAGATGGAAGAACCACTCTCCTACATTTTGTTGTACAAGAAATCATCAGAAGTGAAGGAGCTCGTCTTTGTAGCACGAGTCAACCTCCAAACTCCAACCTGAGCGACGATGTAAAATGCAGGAAAATCGGCCTGCAAGTTGTTTCAGGTCTCAGCTCGGAGCTCGCCAATGTGAAGAAAGCAGCGTCAATGGATTCCGATGTGCTCAGCGGGGAGGTCATCAAGCTTTCTAGAGGACTCGACAACATCAGGGAGGCTATATGTTTAAACGAAGCAGCGGGGACAAATCAAAGCACGGAAAAGTTCTCCGAGTCGATGAATAGATTCTTGAACATGGCAGAAGTGGAAATCATCAGAATTCAAGCTCATGAAAGCGTTGCATTATCTCTAGTAAAGGAGATCACAGAGTACTTCCATGGCAACTCTGCCAAAGAAGAAGCTCATCCATTTAGAATCTTCATGGTGGTGAGAGATTTCCTAACGATCCTGGACGGAGTCTGCAAGGAAGTCGGGATGGTAAACGAGCGAACGATCGTGAGTTCGGCACATAAATTTCCAGTTCCAGTGAATCCAACAATACCACAAGCATTTCAAGCTCATCAAAAAGTGCAGAAATACAGTTCATCTGATGAAGAAAGTGGATAA 3210 47.82 MFDFIIFFFFILLAPCKSSEISAAARRLLHQPFFPYDSVPPAELPSLPVPPPPDPKYPFSTTPPATPDGSPFFPTYPGTPPPPTPASIATFPANISSLILPRSSPSGSSSKKLVPLVVAAVVSVVLVVCIAGFLYWRRRSRRGLAEDKTFRSESSSRLCPVPSVEVGNGIPKLRHPSASSSEFLYLGTLVNSRGINDRSVGGARVADPRPLDSPELHPLPPLNFGRSNEKQNGGNEDERSMGDEEEEEFYSPKGSLGAIGSGSRRVLATMAAEDLLGKTSDSSSTSYSTSSGSVSPARSRSKSLSLSPPASLSPRRSVQNDSSHFSVSATVATEQLSPPLTPPLSHGGGESDDGGKSHCPSPLRLSTEKAPEKSSTASSSRRFSNASVHSAMLPISATNKDLDNHDETNNNHEEQSPRQSHSSDPDQFPSSPCLSPLSDGILGKVQIQSPTVSNVRDSDSDAKFKQLPYSFTSSSPSSSPERVVLDSSPSRTSIISDQNRSSPSPPSPERILMSDSDSSRRTFDHFDQDLQSSSADIISTDVDRLQSPSGVPAAPPPPPPPPPPLAAPPPPIRCEMPISPSTPVGQSIPMAPPPLVPPLRPFIIDTVKNVSPVQLPSCNGESSEDTPKPKLKPLHWDKVRASSDREMVWDQLRSSSFKVNEEMIETLFVVNTSNSKETTPRPVLPTPNQEIGVLDPKKSQNIAIALRALNVTIEEVCEALLEGNADALGLDLLESLLKMAPTKEEERKLKASKDVSPTKLGPAEKFLKAVLDVPFAFKRVDAMLYMANFESEIEYLKKSFENLETACEELRNSRMFLKLLEAVLKTGNRMNVGTNRGEAQAFKLDTLLKLVDVKGADGRTTLLHFVVQEIIRSEGARLCSTSQPPNSNLSDDVKCRKIGLQVVSGLSSELANVKKAASMDSDVLSGEVIKLSRGLDNIREAICLNEAAGTNQSTEKFSESMNRFLNMAEVEIIRIQAHESVALSLVKEITEYFHGNSAKEEAHPFRIFMVVRDFLTILDGVCKEVGMVNERTIVSSAHKFPVPVNPTIPQAFQAHQKVQKYSSSDEESG 1069
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 704681 709030 - Cp4.1LG05g00500.1 Cpe05g00138 469343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe05g00138 1069 MobiDBLite consensus disorder prediction 550 573 - -
Cpe05g00138 1069 Pfam Formin Homology 2 Domain 623 1018 IPR015425 -
Cpe05g00138 1069 SUPERFAMILY Formin homology 2 domain (FH2 domain) 555 1027 - -
Cpe05g00138 1069 Coils Coil 395 415 - -
Cpe05g00138 1069 MobiDBLite consensus disorder prediction 277 340 - -
Cpe05g00138 1069 ProSiteProfiles Formin homology-2 (FH2) domain profile. 621 1044 IPR015425 -
Cpe05g00138 1069 PANTHER FORMIN-LIKE PROTEIN 1 5 1068 - -
Cpe05g00138 1069 MobiDBLite consensus disorder prediction 277 521 - -
Cpe05g00138 1069 MobiDBLite consensus disorder prediction 400 420 - -
Cpe05g00138 1069 MobiDBLite consensus disorder prediction 465 513 - -
Cpe05g00138 1069 SMART it6_source 621 1033 IPR015425 -
Cpe05g00138 1069 MobiDBLite consensus disorder prediction 368 394 - -
Cpe05g00138 1069 MobiDBLite consensus disorder prediction 543 573 - -
Cpe05g00138 1069 MobiDBLite consensus disorder prediction 197 261 - -
Cpe05g00138 1069 MobiDBLite consensus disorder prediction 442 457 - -
Cpe05g00138 1069 Coils Coil 786 813 - -
Cpe05g00138 1069 Gene3D Formin, FH2 domain 620 1028 IPR042201 -
Cpe05g00138 1069 PANTHER FORMIN-RELATED 5 1068 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01670 Cpe-Chr1:10453797 Cpe05g00138 Cpe-Chr5:704681 1.64E-20 dispersed
Cpe05g00138 Cpe-Chr5:704681 Cpe05g01150 Cpe-Chr5:7799988 1.44E-171 dispersed
Cpe15g00159 Cpe-Chr15:1315160 Cpe05g00138 Cpe-Chr5:704681 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe05g00138 - - bhj:120077761 1498.41