Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe05g00142 ATGTCCCTCCTCAGTAGATTCTTTTACAGAAGACCCCCAGATGGGTTGCTCGAATTTGTTGAGCGAGTATATATTTTCGATTCGTGCTTTTCCACTGATGTATTGCCCGATGGTATGTATCAAATATATCTGCATGAAATCATAAACGAATTACATGAAGAATTCCCAGACTCCTCCTTCCTTGCATTTAATTTTCGTGAAGGAGAGAAAATGAGCCAATTTGCAGAAATGTTGTGCGAATATGATGTCACTGTGATGGATTATCCTCGACAATATGAAGGGTGCCCTCTTCTTCCATTGTCTTTAATACAGCACTTCCTACGTGTTTGTGAAAGTTGGCTTCTGCTTGGTAATCAACAAAATATCATTCTTCTCCACTGTGAGAGGGGAGGTTGGCCACTCTTAGCATACCTTTTAGCTAGCTTTTTGATTTATAGAAAATTGCACAGTGGTGAGAGGAAAACTCTTGAAATTGTACATCGAGAAGCTCCCAAGGGGTTTTTGCAGCTCTTGTCACCATTAAATCCATTTCCATCTCAGCTCCGCTACTTGCAATATGTTGCAAGGAGAAATATAGTCTCTGAGTGGCCACCACCTGAGCGAGCACTCTCTTTAGATTGTGTAATTCTTCATGGTGTTCCGGGTTTTGATTCTCAGAATGGCTGCAGACCAGTTATTCGTATCTTTGGGAGAAATCTTTTCAGTAAGGGTGGGCTTTCCACCCAAATGATTTTTTCCATGCCCAAGAAAAATAGGGTCCTCCGTCACTACCGCCAGGTAGACTCTGATGTGATTAAAATAGATGTGCAGTGTTTGGTTCAAGGAGATGTAGTGTTGGAGTGTTCACATTTGGAATCAGAACCAGAAAGGGAAGTTATGATGTTTCGTATAATGTTCAACACAGCATTTATTCGATCAAACATACTGATACTAACTTCTGAAAATCTGGACATTCTTTGGGATTCAAAGGAACGCTATCCAAAAGGCTTTCGAGCTGAGATTTTGTTTGGGGAGATAGAATGCATCTCCCCTCCAAGGGCTCCAACCACAATTTTGAATGGCGAAGAGAAAGGTGGATTACCAATTGAAGCTTTTTCCAGGGTTCAAGAACTTTTTAGTGGTGTGGATTGGATGGATACCAATGATGATGTTGCCTTGTGGCTACTGAAAAATCTTTCTGCCTTGAGTGACGTGAAAGAATTGTCAGGATGGCAAACTAAAGCAAGTTCATATTCCTCACCCGTGGATTCTGAAGAGGAAAATAATACGTCTAGCACTGCTGACAGTTCAGATGAAGTATTCGATAGTATGACAAAGTCCTTAGTTGATTTAGCTTCTACCAATTTTACAATTCCAGCTGTGGTACGTTCTTCTGAATTATTGTCTGGCAAGATCGGTGCTACTGAAGTGAATGTTTCACCAGAATCTCCTCAAACTTTTGATGAATGTCAGGATGAAGTCTTTTTAAATAAAGAATCTCTACCGTCTTCATCACCTCCATTATCTTCTCATAGCTCCTCACCCCCTCCTATAAGTTCTTTAATGCCAGCACAACTGTTGCCTCCTAATGTACCATCTACCGATGTTAGTGGGGAACTTGTCTCGAACAAGATGACACCCACTGTTAAAGTGATTCCTCCTCCGCCACCGCCACCCCCACCACAACCTTTTTCTTCATCTCATGATAAACCTCATGTAGAAACTTCCATGAGTTCTGACTCAACGTCCATAACAGTGCATGGGATACCCTCTCCTTCGCTTTCACTTGTTCATAAATCCTCTAGTGCTCCTCCACCCCCACCTCCACCTCCACCTCCCCTCCCAAAAACAACTGGTGTTCCACTGCCACCTCCTTCTTTTGTTGAAAAATCTTCTAGTGCTCCTCCACCTCCCCCCCCACCTCCAGTTCCGAATTCTTTTGGTGCTCCCCCGCCTCCACCTCCACCTCCACATCCACCTCTAATTCCAAAATGTTCTAGTGCTCCTCCACCTCCTCCTCCGCCTCCAATTTTGAAATGTTCTAGTGCTCCTCCACCTCCACCTCCACCACCTATTCCAAAGTCTTCTAGTGCTCCTCCACCCCCACCTCCTCTTCCACAATCAAATCGTGGCATGACACCAGTTCCACCTCCTCCACCACCAAAACCTCCTGGTGTGGAGCTACCAAGTCAGGGTACTAAACCAACTAGGCCTCCTCCGCCTCCTCCACCAACAAAGGCGTTTAGTTCTAATCCTCCGACAAGTCGTGGTGCTACACCAATGCCACCCCCTCTGCCCGGATCAACACGGTCAAATGTACCACCCCCTCCTGATGGAAGGGGGAAATCTTCTCCAGGATCAACAACTCAAGGAAGTGGTCGAGTTGCTACAGGAGTTGTAAATGCTCCAAAGAAAACCACTTTGAAACCATTGCACTGGGTAAAAGTTACTCGAGCAATGCAAGGGAGTTTATGGGCTGACTCACAAAAGCAGGAGAATCAATCAAGGTCCCCAGAAATAGACATCTCTGAACTTGAAAGTCTATTCTCAGCAGCCTCTGCATCTGATGGAAGTGGCAGCAAAAGTGGAGGACGACGTGCTTCCAACATCAACAAACCTGAAAAAGTGCAACTGATTGACTTGCGGAGAGCATATAACTGTGAAATCATGCTCTCAAAAATAAAGATTCCCTTACCGGATATGATAAATTCAGTTCTTGCATTAGATTCTTCTGCTCTTGATATTGACCAGGTTGAGAATCTCATCAAGTTCTGTCCTACGAGGGAAGAAATGGAAACGTTGAAGAATTATACAGGTGAGAAAGCAATGCTTGGAAAGTGTGAGCAGTTTTTTCTTGAGTTAATGAAGGTCCCACGAATAGAGCCCAAGTTACGAGTATTTGCTTTCAAAATTACCTTTTCAAGCCAGGTGAAGGATTTGAGATATAATTTGAATACAATAAATGATGCTACAAGAGAGGTCAAAGGATCTGAAAAATTGCGTCAAGTAATGCAAACAATTCTTACATTGGGCAATGCGTTAAACCAGGGTACTGCTCGAGGCTCTGCTATAGGTTTTAAGTTGGACAGCCTTCTTAAATTGTCTGACACTCGGGCAAGAAACAACAAAATGACTTTGATGCATTATTTATGTAAGCTCCTTGCAGAGAAAATGCCAGAGTTACTTGATTTTGACAAGAACCTTGTTCATTTAGAAGCTGCCTCTAAGATTCAATTGAAAGCATTGGCTGAAGAAATGCAAGCTGTGAGTAAAGGTCTTGAAAAGGTGGAGCAAGAGCTAACTGCTTCTGAAAATGACGGTGCTATCTCTATTGGTTTCCAGAAGGTTCTGAAGAATTTTCTTGATACTGCTGAAGCTGAAGTAAGGACACTCATCTCCTTATATTCTGTAGTGGGGAGAAACGCTGATTCATTATCCCAGTACTTTGGCGAGGATCCAGCTCGGTGCCCCTTTGAGCAAGTGACTCAAATTTTGATAGTTTTTGTTAAGATGTTCAAGAAGTCGCGCGAAGAAAATGTAAGGCAGGCTGATGCTGAAAAGAAAAAAATAGAGAAGGAAGCCATGAAAGAAAGAAGTTTTGTAAAAGCAAAGTGA 3594 43.04 MSLLSRFFYRRPPDGLLEFVERVYIFDSCFSTDVLPDGMYQIYLHEIINELHEEFPDSSFLAFNFREGEKMSQFAEMLCEYDVTVMDYPRQYEGCPLLPLSLIQHFLRVCESWLLLGNQQNIILLHCERGGWPLLAYLLASFLIYRKLHSGERKTLEIVHREAPKGFLQLLSPLNPFPSQLRYLQYVARRNIVSEWPPPERALSLDCVILHGVPGFDSQNGCRPVIRIFGRNLFSKGGLSTQMIFSMPKKNRVLRHYRQVDSDVIKIDVQCLVQGDVVLECSHLESEPEREVMMFRIMFNTAFIRSNILILTSENLDILWDSKERYPKGFRAEILFGEIECISPPRAPTTILNGEEKGGLPIEAFSRVQELFSGVDWMDTNDDVALWLLKNLSALSDVKELSGWQTKASSYSSPVDSEEENNTSSTADSSDEVFDSMTKSLVDLASTNFTIPAVVRSSELLSGKIGATEVNVSPESPQTFDECQDEVFLNKESLPSSSPPLSSHSSSPPPISSLMPAQLLPPNVPSTDVSGELVSNKMTPTVKVIPPPPPPPPPQPFSSSHDKPHVETSMSSDSTSITVHGIPSPSLSLVHKSSSAPPPPPPPPPPLPKTTGVPLPPPSFVEKSSSAPPPPPPPPVPNSFGAPPPPPPPPHPPLIPKCSSAPPPPPPPPILKCSSAPPPPPPPPIPKSSSAPPPPPPLPQSNRGMTPVPPPPPPKPPGVELPSQGTKPTRPPPPPPPTKAFSSNPPTSRGATPMPPPLPGSTRSNVPPPPDGRGKSSPGSTTQGSGRVATGVVNAPKKTTLKPLHWVKVTRAMQGSLWADSQKQENQSRSPEIDISELESLFSAASASDGSGSKSGGRRASNINKPEKVQLIDLRRAYNCEIMLSKIKIPLPDMINSVLALDSSALDIDQVENLIKFCPTREEMETLKNYTGEKAMLGKCEQFFLELMKVPRIEPKLRVFAFKITFSSQVKDLRYNLNTINDATREVKGSEKLRQVMQTILTLGNALNQGTARGSAIGFKLDSLLKLSDTRARNNKMTLMHYLCKLLAEKMPELLDFDKNLVHLEAASKIQLKALAEEMQAVSKGLEKVEQELTASENDGAISIGFQKVLKNFLDTAEAEVRTLISLYSVVGRNADSLSQYFGEDPARCPFEQVTQILIVFVKMFKKSREENVRQADAEKKKIEKEAMKERSFVKAK 1197
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 727391 737119 - Cp4.1LG05g00360.1 Cpe05g00142 469347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe05g00142 1197 MobiDBLite consensus disorder prediction 492 797 - -
Cpe05g00142 1197 MobiDBLite consensus disorder prediction 561 593 - -
Cpe05g00142 1197 Pfam Formin Homology 2 Domain 796 1166 IPR015425 -
Cpe05g00142 1197 MobiDBLite consensus disorder prediction 594 742 - -
Cpe05g00142 1197 Coils Coil 1166 1186 - -
Cpe05g00142 1197 MobiDBLite consensus disorder prediction 492 537 - -
Cpe05g00142 1197 SMART PTEN_C2_2 198 338 IPR014020 -
Cpe05g00142 1197 Gene3D Formin, FH2 domain 793 1177 IPR042201 -
Cpe05g00142 1197 Coils Coil 1072 1099 - -
Cpe05g00142 1197 MobiDBLite consensus disorder prediction 542 559 - -
Cpe05g00142 1197 Gene3D Protein tyrosine phosphatase superfamily 16 191 IPR029021 -
Cpe05g00142 1197 MobiDBLite consensus disorder prediction 775 789 - -
Cpe05g00142 1197 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Cpe05g00142 1197 MobiDBLite consensus disorder prediction 749 774 - -
Cpe05g00142 1197 SMART it6_source 597 1197 IPR015425 -
Cpe05g00142 1197 Gene3D - 197 341 - -
Cpe05g00142 1197 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 20 187 IPR029021 -
Cpe05g00142 1197 Pfam C2 domain of PTEN tumour-suppressor protein 199 337 IPR014020 -
Cpe05g00142 1197 PANTHER FORMIN-J 1 1191 - -
Cpe05g00142 1197 SUPERFAMILY Formin homology 2 domain (FH2 domain) 866 1192 - -
Cpe05g00142 1197 MobiDBLite consensus disorder prediction 408 432 - -
Cpe05g00142 1197 ProSiteProfiles Formin homology-2 (FH2) domain profile. 791 1191 IPR015425 -
Cpe05g00142 1197 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 200 339 IPR035892 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g01248 Cpe-Chr4:10415693 Cpe05g00142 Cpe-Chr5:727391 2.03E-154 dispersed
Cpe05g00142 Cpe-Chr5:727391 Cpe06g00297 Cpe-Chr6:1626314 5.77E-160 dispersed
Cpe15g00167 Cpe-Chr15:1385769 Cpe05g00142 Cpe-Chr5:727391 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe05g00142 - - cmos:111464075 974.926