Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe05g00154 ATGTTATCAAGGAAAGAAGAGTCTCCAAACACAAGCACTGGCATTGTTAATCCTGAATGGTCAGGATTTCAGGCATATTCTCCAATACCTCCACCTGGATATTTGCCAACAAGCCCCCAGGCACACCCATATATGTGGGGGGTACAGCCCATTATGCCCCCTTATGGTACCCCTCCACATCCCTATGTTGCAATGTATCCCCATGGTGGCATCTATGCTCATCCACCTATTCCTCCGGGATCATATCCTTACAGTCCTTTTGCTATAGCTTCTCCAAATGGGATTGCTGAGGCTTCTGGGAATACACCAGGCAACATGGAAGGGGATGGTAAGCCCTCTGAGCTGAAAGAAAAGTTGCCAATTAAAAGATCGAAAGGAAGTCTGGGAAGTTTAAACATGATCACTGGGAAGAACAACGAGCTTGGTAAACCATCAGGAGCATCTGCTAATGGAGTTTATTCTAAAAGCGCTGAAAGTGAAAGTGAAGGTTCAAGCGAAAGAAGTGATGCTGACTCTCAAAATGATTCACAACTAAAATCTGGATCTGGGAAAGATTCTTTAGAAGGTGGAGGGACTCCTAATGGTTTAATGCATGGTTCTCAGAATGAAGGACATAGTCTCGCTCATCCATTGGTGAACCAAACAATGTCCATAATACCAATTCAAGCTTCTGGAGCTGTTTCAGGTCCTGCTACAAATTTGAATATAGGAATGGATTATTGGGGTACTCCTACAACTTCTGCCATCCCTTCATTGGGTGGGAAGGTCCCTTCCGCTCCGGTTGTGGGAGCTGCTGCTGCTGGGTCACGGGACAGCATTCAGTCACAGATTTGGTTACAGGATGAAAGAGAGCTAAAAAGGCAAAAAAGGAAGCAGTCAAACAGAGAATCTGCTCGTAGGTCTCGGTTGCGTAAACAGGCTGAATGTGACGAGCTTTCTCATCGTGCCGAAGCTTTGAATGAGGAAAATGCGAGTCTTAGGTCCGAAGTGGATAGGATTAGGAGTGAGTACGAGCAACTTCTTTCAGAGAATGCTTCTCTCAAGAGGAGGCTTGGAGAAAGTGATGGAAAAGAAGATCCAAGAGCCACCAAAGATGGCCAAAATGTTAATAAAGAACCTCAGCGTACATCCCGGACCGAGTTCACCAACGGGTAA 1155 45.63 MLSRKEESPNTSTGIVNPEWSGFQAYSPIPPPGYLPTSPQAHPYMWGVQPIMPPYGTPPHPYVAMYPHGGIYAHPPIPPGSYPYSPFAIASPNGIAEASGNTPGNMEGDGKPSELKEKLPIKRSKGSLGSLNMITGKNNELGKPSGASANGVYSKSAESESEGSSERSDADSQNDSQLKSGSGKDSLEGGGTPNGLMHGSQNEGHSLAHPLVNQTMSIIPIQASGAVSGPATNLNIGMDYWGTPTTSAIPSLGGKVPSAPVVGAAAAGSRDSIQSQIWLQDERELKRQKRKQSNRESARRSRLRKQAECDELSHRAEALNEENASLRSEVDRIRSEYEQLLSENASLKRRLGESDGKEDPRATKDGQNVNKEPQRTSRTEFTNG 384
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 801123 807358 + Cp4.1LG05g00470.1 Cpe05g00154 469359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe05g00154 384 MobiDBLite consensus disorder prediction 348 368 - -
Cpe05g00154 384 MobiDBLite consensus disorder prediction 284 309 - -
Cpe05g00154 384 MobiDBLite consensus disorder prediction 341 384 - -
Cpe05g00154 384 SUPERFAMILY Leucine zipper domain 285 341 IPR046347 GO:0003700|GO:0006355
Cpe05g00154 384 MobiDBLite consensus disorder prediction 1 20 - -
Cpe05g00154 384 MobiDBLite consensus disorder prediction 128 159 - -
Cpe05g00154 384 Pfam G-box binding protein MFMR 7 78 IPR012900 -
Cpe05g00154 384 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 289 304 IPR004827 GO:0003700|GO:0006355
Cpe05g00154 384 Pfam bZIP transcription factor 282 344 IPR004827 GO:0003700|GO:0006355
Cpe05g00154 384 SMART brlzneu 282 346 IPR004827 GO:0003700|GO:0006355
Cpe05g00154 384 Pfam Disordered region downstream of MFMR 117 250 - -
Cpe05g00154 384 Coils Coil 302 350 - -
Cpe05g00154 384 CDD bZIP_plant_GBF1 287 337 IPR045314 GO:0003700|GO:0006355
Cpe05g00154 384 PANTHER BZIP TRANSCRIPTION FACTOR 68 10 380 - -
Cpe05g00154 384 Gene3D - 285 354 - -
Cpe05g00154 384 MobiDBLite consensus disorder prediction 1 21 - -
Cpe05g00154 384 PANTHER G-BOX-BINDING FACTOR 3-RELATED 10 380 IPR044827 GO:0003700|GO:0006355|GO:0043565
Cpe05g00154 384 MobiDBLite consensus disorder prediction 369 384 - -
Cpe05g00154 384 MobiDBLite consensus disorder prediction 95 206 - -
Cpe05g00154 384 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 284 347 IPR004827 GO:0003700|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe05g00154 Cpe14g00989 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g00154 Cpe-Chr5:801123 Cpe10g00596 Cpe-Chr10:3491811 1.83E-60 dispersed
Cpe14g00989 Cpe-Chr14:8347870 Cpe05g00154 Cpe-Chr5:801123 1.89E-165 wgd
Cpe05g00154 Cpe-Chr5:801123 Cpe08g00881 Cpe-Chr8:6961788 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
49479 PF16596 MFMR_assoc 7.20E-49 No_clan Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe05g00154 K09060 - csv:101214217 666.381