Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cpe05g00163 | ATGCTTCAGCTGGAGGTTCTTTCCAATGGGAATTCACTGCACGAGGTTGCTCACATTGCTAATGGCTCCCACCCTGGAAACTGCATATCTCTGCTTCGTATCAATGTGGCCAGCAATTTCTCCCAGCATGTTGAGCTGATGCTGCAGGAGAGCTGCACGGACCAGTCCGGCAGCCTCGTCGTCTTCGCTACCATCGACGTCGATTCAATTCAGTTAGCCATGAGCGGAGAAGACTCCTCCAGCATTCCCCTCCTCCCCATAGGATTTTCCATCGTCCCCGTTGTCGATTCGACTGCCGATGGACGCCTAGCATCATCGCCACCCAAGGACGGTGCTACTAATGCTGCAGTTGTCAACTCCGGCTGCTTACTTACCGTCGGCCTGCAAGTTCTAGCCAGCACCATTCCATCGGCGAAGCTCAACTTGTCTAGTGTAACCGCCATCAACAACCAGCTCTGTAACACGCTCCACCAAATTAACGCTGCTCTTGGCTGCAGCTCAACTCAGCTCGAGAATGCCAATGCCACTGTCGACCAGAATACTGCACTGCCGCTGCCGACACAACCGCCACCCAAGCAATAA | 582 | 53.95 | MLQLEVLSNGNSLHEVAHIANGSHPGNCISLLRINVASNFSQHVELMLQESCTDQSGSLVVFATIDVDSIQLAMSGEDSSSIPLLPIGFSIVPVVDSTADGRLASSPPKDGATNAAVVNSGCLLTVGLQVLASTIPSAKLNLSSVTAINNQLCNTLHQINAALGCSSTQLENANATVDQNTALPLPTQPPPKQ | 193 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 872077 | 872761 | - | Cp4.1LG05g00220.1 | Cpe05g00163 | 469368 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cpe05g00163 | 193 | PANTHER | - | 4 | 170 | - | - | |
| Cpe05g00163 | 193 | PANTHER | HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 | 4 | 170 | IPR042160 | - | |
| Cpe05g00163 | 193 | SUPERFAMILY | Bet v1-like | 14 | 159 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cpe05g00163 | Cpe-Chr5:872077 | Cpe02g01091 | Cpe-Chr2:10001766 | 5.79E-48 | dispersed | |
| Cpe05g00163 | Cpe-Chr5:872077 | Cpe05g00164 | Cpe-Chr5:872972 | 7.60E-133 | tandem | |
| Cpe15g00193 | Cpe-Chr15:1602997 | Cpe05g00163 | Cpe-Chr5:872077 | 1.24E-92 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cpe05g00163 | - | - | cpep:111794966 | 371.703 |