Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe05g00164 ATGGATAGAAGAATGTATGGGGATTGCCAAGTGATGTCAAGCAATATGGGAGCAAACATGGCTTCCTCTGAATCTCTCTTCTCTTCTCCCATTCAAAACCCTAATTTCAACTTCATTTCCAATTTCCACCATTTCCCTTCTATTGTTCCTAAGGAAGAAAATGGGTTGATTATGAGAGGAAAAGAAGATATGGAAAGTGGGTCTGGAAGTGAACAGCTTGCACAACAAGACAGATCTGATAACGTGATACTTAGGTCTGAAAATGATACCTTAAAGAATGAGAATTATAGACTGCAAACTGCCTTGAGAAACATTATATGCCCTAGCTGTGGAGGGCAAGTTTGCTCCTTCACCTCAAGATACACTGGTCGCCCACTCCAAGGGATGTCCTCCACAGCTCCCCCTCTTATGCAGCCATCTCTTGATTTGGACATGAACATATACTCAAGGCAATACACAGAGGCCATGGTATCATCCTCCGAAATGATGCCATTGGCTGGAATGGCTTTTGGGGCGCATCGCTGGTTAGCTATTTTACAAAGACAATGCGAGAGAATTGCAAGCCTCATGGCTCGAAACATTTCTGATCTTGGAGTGATACCTTCACCAGAAGCAAGACAGAACTTAATGAAATTGGCACAAAGAATGACCAGAACTTTCTCACTTAACATAAGCACCTCCGGTGGCCAGTCATGGACCGCGTTGTCCGATTCTCCTGATGATACTGTTCGTATAACGACCCGAAAAATCGTCGAGCCCGGCCAACCTAATGGGGTTATTCTTAGTGCTGTCTCCACCACTTGGCTTCCCTATCCTCATTACGGTGTCTTCGATCTTCTTCGAGATGAACGACAACGATCTCAGCTGGAGGTTCTTTCCAATGGGAATTCACTGCACGAGGTTGCTCACATTGCTAATGGCTCCCACCCTGGAAACTGCATATCTCTGCTTCGTATCAATGTGGCCAGCAATTTCTCCCAGCATGTTGAGCTGATGCTGCAGGAGAGCTGCACGGACCAGTCCGGCAGCCTCGTCGTCTTCGCTACCATCGACGTCGATTCAATTCAGTTAGCCATGAGCGGAGAAGACTCCTCCAGCATTCCCCTCCTCCCCATAGGATTTTCCATCGTCCCCGTTGTCGATTCGACTGCCGATGGACGCCTAGCATCATCGCCACCCAAGGACGGTGCTACTAATGCTGCAGTTGTCAACTCCGGCTGCTTACTTACCGTCGGCCTGCAAGTTCTAGCCAGCACCATTCCATCGGCGAAGCTCAACTTGTCTAGTGTAACCGCCATCAACAACCAGCTCTGTAACACGCTCCACCAAATTAACGCTGCTCTTGGCTGCAGCTCAACTCAGCTCGAGAATGCCAATGCCACTGTCGACCAGAATACTGCACTGCCGCTGCCGACACAACCGCCACCCAAGCAATAA 1437 48.36 MDRRMYGDCQVMSSNMGANMASSESLFSSPIQNPNFNFISNFHHFPSIVPKEENGLIMRGKEDMESGSGSEQLAQQDRSDNVILRSENDTLKNENYRLQTALRNIICPSCGGQVCSFTSRYTGRPLQGMSSTAPPLMQPSLDLDMNIYSRQYTEAMVSSSEMMPLAGMAFGAHRWLAILQRQCERIASLMARNISDLGVIPSPEARQNLMKLAQRMTRTFSLNISTSGGQSWTALSDSPDDTVRITTRKIVEPGQPNGVILSAVSTTWLPYPHYGVFDLLRDERQRSQLEVLSNGNSLHEVAHIANGSHPGNCISLLRINVASNFSQHVELMLQESCTDQSGSLVVFATIDVDSIQLAMSGEDSSSIPLLPIGFSIVPVVDSTADGRLASSPPKDGATNAAVVNSGCLLTVGLQVLASTIPSAKLNLSSVTAINNQLCNTLHQINAALGCSSTQLENANATVDQNTALPLPTQPPPKQ 478
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 872972 878859 - Cp4.1LG05g00200.1 Cpe05g00164 469369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe05g00164 478 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 166 455 IPR042160 -
Cpe05g00164 478 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 73 113 IPR042160 -
Cpe05g00164 478 PANTHER - 166 455 - -
Cpe05g00164 478 PANTHER - 73 113 - -
Cpe05g00164 478 SUPERFAMILY Bet v1-like 222 444 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g00164 Cpe-Chr5:872972 Cpe15g00193 Cpe-Chr15:1602997 9.97E-10 dispersed
Cpe05g00163 Cpe-Chr5:872077 Cpe05g00164 Cpe-Chr5:872972 7.60E-133 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe05g00164 - - mcha:111026034 518.464