Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cpe05g00221 | ATGGAGGTGTCAGTTAAATGTGGGTTATTTGGGTGCCTCTTGGTTGTGCTCGTGCCTGCGCTGTGCTACTCTCAAGACACTTTTGTCGCCTCTAGAGCCACTTATTATGGCAGCCCTGATTGCTATGGGACACCATCTGGGGCTTGTGGATTTGGTGAATTCGGTAGGACTGTCAATAATGGGAATGTCGCTGCAGTTAGGTGCACCAATCCAACTTATTGCAGTGAGAATGGAGCCTATGTAGTGGTGACTGACCATGGTGAAGGGGATTACACTGACTTTATCATGAGCCCAAGAGCTTATGCAAATTTAGCACATCCAAACACAGCCTTAGAATTGTTCTCTAACGGTGTGGTTGATGTAGAATTCAGAAGGGTTTCATGTCGATACCCTAATTACAACACGGTCAAATTTAAGGTCCATGAGCATAGTCGATACCCCGACTACTTAGCCATTATCCTCATCTATGTGTCGGGCAAAAACGACATCTCCGCCGTTGAAGTGTGGCAGGAGGATTGCAAGGAATGGAAGGGGATGAGGAGAGCACATGGAGCTGTATGGGACATGGCAAACCCACCAAAAGGAGACCTAAAGTTGAGGTTTCAAGTGAGTGGAAGTGTAGGGTATGGTAGGTGGGTGGTGGCAAGCAATGGCCTCCCAAGCTATTGGAGGGCAGGAGTTGCTTATGACACAGATATTCACCTCTTTTAA | 711 | 47.26 | MEVSVKCGLFGCLLVVLVPALCYSQDTFVASRATYYGSPDCYGTPSGACGFGEFGRTVNNGNVAAVRCTNPTYCSENGAYVVVTDHGEGDYTDFIMSPRAYANLAHPNTALELFSNGVVDVEFRRVSCRYPNYNTVKFKVHEHSRYPDYLAIILIYVSGKNDISAVEVWQEDCKEWKGMRRAHGAVWDMANPPKGDLKLRFQVSGSVGYGRWVVASNGLPSYWRAGVAYDTDIHLF | 236 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 1245754 | 1247451 | + | Cp4.1LG05g02200.1 | Cpe05g00221 | 469426 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cpe05g00221 | 236 | ProSiteProfiles | Expansin, family-45 endoglucanase-like domain profile. | 19 | 133 | IPR007112 | - | |
| Cpe05g00221 | 236 | Pfam | Expansin C-terminal domain | 136 | 218 | IPR007117 | - | |
| Cpe05g00221 | 236 | ProSiteProfiles | Expansin, Cellulose-binding-like domain profile. | 148 | 231 | IPR007117 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cpe05g00221 | Cpe-Chr5:1245754 | Cpe15g00630 | Cpe-Chr15:7023144 | 5.02E-40 | dispersed | |
| Cpe15g00303 | Cpe-Chr15:3907263 | Cpe05g00221 | Cpe-Chr5:1245754 | 3.58E-152 | wgd | |
| Cpe15g00336 | Cpe-Chr15:4557478 | Cpe05g00221 | Cpe-Chr5:1245754 | 4.77E-41 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cpe05g00221 | - | - | csv:101215548 | 402.134 |