Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe05g00250 ATGAAGATTGGAGCGATGGAAGATGTGGCGATAATTGGAGGATTGATTTCAGTGCAGTTCATATACGCTGGAAACTCGGTATTGCTAAGTTATTTGATGTCGTTAGGGCTCAATCCTCTCAACATCGTCATTTATATTGCCTCTGCCACATTTCTATTTTTGGCTCCTCTGGCTGTTTGTTTTGAAAGGAGCAATTGGCCCAAGAAATTGAGTTTCAAGTTGGTGCTTCAGCTTGTTCTGATCTCCTTTGGCGGGGTAACTTTGTTCCAAACTCTGCTATTAGAAGGGATAAAGCTGACTTCTCCAGCCATGGCAACTGCCATGCCAAACATTGCTCCTGGTCTCATCTTTATCATTGCCTGGTGTTTTAGATTAGAGAGAGTCAAACTTGGTTGTCTGTACAGCAAAGTTAAGATTTTAGGGACATTGCTTTGTGTAGTGGGCGCCATCATAATGAGCATACTGCACAGCACCATCACGATACCGGCAAAAGAGCAGCTAATTTTTCTTCCTTCATCTGTACTCTTCAATAAGGAAAAGTTTATTGGTTGTTTGTATCTCATGATGGCGGTCTTCGTATTATCAAGCAATGTTGTATTGCAGGCTACAGCCCTTGGTGAATTACCCGCTCCAATGTCGTTGAGTGCTGTAACTTCGTTCATTGGAGTATTAACGACTGCAGTTGTACAATTACTGAAGAATCATAAGTTAGAAACCGAATGGTCAACTGTCAACATGAAGGATTTACTCTGCTACTCTCTATTGGGAGGAATAGTGAGCGGTATAAGCTTGAGCTTCAACGGGTGGGCAATGAAGAAAAGAGGGCCAGTTTTGGTGTCAATTTTCAGTCCTATTGGAACAGTTTTCTCTGTCATTCTCTCTGTCTTCACCTTAGGAGACACTATTTCCATTGGAAGCCTTGCTGGTATGTTCTTGATGTTCTGTGGGCTCTACTTTGTGCTTTGGGCCAAAGGAAAAGAAGGTTACTGTGATGGGAGTGGCTATCAAAGTGATGACTTTGATATTGAGAAACCTTTACTCTCTTGA 1047 42.12 MKIGAMEDVAIIGGLISVQFIYAGNSVLLSYLMSLGLNPLNIVIYIASATFLFLAPLAVCFERSNWPKKLSFKLVLQLVLISFGGVTLFQTLLLEGIKLTSPAMATAMPNIAPGLIFIIAWCFRLERVKLGCLYSKVKILGTLLCVVGAIIMSILHSTITIPAKEQLIFLPSSVLFNKEKFIGCLYLMMAVFVLSSNVVLQATALGELPAPMSLSAVTSFIGVLTTAVVQLLKNHKLETEWSTVNMKDLLCYSLLGGIVSGISLSFNGWAMKKRGPVLVSIFSPIGTVFSVILSVFTLGDTISIGSLAGMFLMFCGLYFVLWAKGKEGYCDGSGYQSDDFDIEKPLLS 348
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 1423194 1427834 - Cp4.1LG05g02650.1 Cpe05g00250 469455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe05g00250 348 SUPERFAMILY Multidrug resistance efflux transporter EmrE 246 325 - -
Cpe05g00250 348 Pfam EamA-like transporter family 182 321 IPR000620 GO:0016020|GO:0016021
Cpe05g00250 348 Pfam EamA-like transporter family 16 153 IPR000620 GO:0016020|GO:0016021
Cpe05g00250 348 PANTHER OS11G0588100 PROTEIN 10 348 - -
Cpe05g00250 348 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 154 - -
Cpe05g00250 348 PANTHER WAT1-RELATED PROTEIN 10 348 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g00250 Cpe-Chr5:1423194 Cpe01g02280 Cpe-Chr1:19291497 2.11E-20 dispersed
Cpe05g00250 Cpe-Chr5:1423194 Cpe08g00736 Cpe-Chr8:5816819 7.54E-136 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe05g00250 - - csv:101204100 532.717