Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe05g00291 TTTCATACACAATTGCCGGCCAGCCCTGTCTCCCTTCCCCAATATAAACCATCCACTTTGGTGAGTTCACCAAGTGCATCAAGCATTAGCCTTTTCCCTTACACAATGGTTGCTTTCCCTTCTCTTTTTCTTCTTCTATTGCTCAACTTTCATTATGTTGGGGCTTTAGTGACTGAGCTTCCGTTGATCAATCTTCAAACGTACATTGTCCACGTGGAGAAACCAGAGACGACGGATGATCTTGAGAGCTGGCATCGATCGTTCTTACCGNTTTTTATTCTTCCGTTGATCAATCTTCAAACGTACATTGTCCACGTGGAGAAACCAGAGACGACGGATGATCTTGAGAGCTGGCATCGATCGTTCTTACCGTCGAGTTCGAGTTTGCTATACTCGTATCGAAATGTGATGAGTGGTTTTGCTGCAAGACTAAGTGAAGAACAAGTGAAAGCAATGGAAGAGAAGGATGGTTTTGTGTCAGCAAGGCGTGAAAGGATATTGCAATTGCATACAACGCATACCCCTGATTTTCTTGGTTTGAATCGCCAATTTGGGTTTTGGAAAGATTCAAACTTTGGAAAGGGAGTGATCATAGGAGTGTTGGATGGCGGAATTGCGCCAAGCCATCCTTCATTTGATGATGTGGGAATGCCACCACCGCCACCCAAATGGAAAGGAAGATGCGAGTTTAATTTCTCAGCCTGCAACAACAAGCTTATAGGTGCGAGATCTTTTAATCTCGCAACAAAAGTCTTGAAAGGAGAGACAATGATGGATGACTCTCCTATTGATGAAGATGGTCATGGGACTCATACAGCGAGCACAGCTGCTGGTGCCTTCGTCAAGGGCGCTGAGGCATTGGGAAACGCTAAAGGCACGGCTGTTGGCATGGCCCCTTTAGCTCATCTAGCAATTTACAAAGTTTGCTTTGGAGAAGACTGCCCTGACACCGACATTCTCGCTGCACTTGATGCCGCTATTGAAGACGGCGTCGATGTGCTCTCACTCTCGCTTGGGAGCCCATCGGTTCCATTCTTCCAAGACTTAGTCGCCATAGGTGCATTCGCAGCCATTCAAAAGGGGATTTTTGTGAGTTGCTCAGCTGCTAATTCAGGCCCTTTTAAAGCCACATTGTCCAACGAAGCCCCGTGGATTCTAACGGTTGCAGCCAGCACCATTGATCGAAGAATCAAAGCCGCTGCAAAGCTTGGAAATGGAGAAGAATTTGATGGCGAATCTCTGTTCCAACCAAGCGATTTCCCACCAACATTTTTGCCACTTGTTTACGCTGGTGAGAAGAATCAAACAGCCGCTTTGTGTGGAGAAGGATCATTGAAAGACATCGACGTAAAGGGAAAAATTGTGGTATGCGAAAGAGGAGGAGGAATTGCAAGAATTGCAAAAGGGACTGAAGTCAAGAACGCAGGGGGCGCCGCCATGATCCTCCTAAACCAACAACAAGATGGGTTCAGTACTGAAGCAGATGCTCACGTTCTTCCGGCAAGCCACGTCAGCCACAAGGCGGCGTTGAAGATAAAAGCCTACATAAACTCAACAACATACCCAACAGCCACAATTCTTTTCAAAGGAACCGTAATTGGCGACGACAACTTTTCACCCGCCATAGCTTCTTTTTCATCTCGAGGTCCCAGCGTTGCAAGCCCTGGAATTTTGAAGCCCGACATAACCGGTCCAGGTGTCAGCATTTTAGCCGCATGGCCATTTCCATTAGACAAAAACAGTAACACAAAATCAACATTCAACATAATTTCAGGAACATCCATGTCCTGTCCTCATCTCAGCGGCATTGCAGCTCTAATCAAAAGCTCTCACCCTGATTGGTCACCGGCCGCCATTAAATCCGCCATAATGACAACCGCTGACATAACAAATCTTGAAGGCCAGCCAATTGTCGACGAAAATTTGCAGCCGGCGGATTTGTTTGCAACTGGCGCTGGTCATGTCAATCCATCAAAAGCAGCCGACCCAGGATTAGTTTATGACATTCAACCCGATGATTACATTCCTTATCTTTGTGGATTGGGATACAAAAGTAACGAAGTTGCAACAATTGCCCGTAAACCAATTAATTGTTTGGCAAAACCAAGCATTCCCGAAGGAGACCTCAACTATCCGTCATTTACGGTCGTTTTAGGACCGCCGCAAACATTTACAAGAACGGTGACAAATGTCGGCTGTGGACGTGAAGTTTATACTGCCGTGGTCGAAGCACCGCCGTCCATTTCTGTAACAATCCGACCAAGTAAGATATTCTTCTCAAAGATTAACGAAAAAGTGACATATTCAGTGACGTTCAAGAGAATTGGTTCGATCAGTCCCTCAACAGAATTTGGTAAAGGATATCTCAAATGGGTTTCCGACAAACACGTCGTTAGAAGTCCGATCTCTTTTAAGTTTGCATGA 2424 45.79 FHTQLPASPVSLPQYKPSTLVSSPSASSISLFPYTMVAFPSLFLLLLLNFHYVGALVTELPLINLQTYIVHVEKPETTDDLESWHRSFLPXFILPLINLQTYIVHVEKPETTDDLESWHRSFLPSSSSLLYSYRNVMSGFAARLSEEQVKAMEEKDGFVSARRERILQLHTTHTPDFLGLNRQFGFWKDSNFGKGVIIGVLDGGIAPSHPSFDDVGMPPPPPKWKGRCEFNFSACNNKLIGARSFNLATKVLKGETMMDDSPIDEDGHGTHTASTAAGAFVKGAEALGNAKGTAVGMAPLAHLAIYKVCFGEDCPDTDILAALDAAIEDGVDVLSLSLGSPSVPFFQDLVAIGAFAAIQKGIFVSCSAANSGPFKATLSNEAPWILTVAASTIDRRIKAAAKLGNGEEFDGESLFQPSDFPPTFLPLVYAGEKNQTAALCGEGSLKDIDVKGKIVVCERGGGIARIAKGTEVKNAGGAAMILLNQQQDGFSTEADAHVLPASHVSHKAALKIKAYINSTTYPTATILFKGTVIGDDNFSPAIASFSSRGPSVASPGILKPDITGPGVSILAAWPFPLDKNSNTKSTFNIISGTSMSCPHLSGIAALIKSSHPDWSPAAIKSAIMTTADITNLEGQPIVDENLQPADLFATGAGHVNPSKAADPGLVYDIQPDDYIPYLCGLGYKSNEVATIARKPINCLAKPSIPEGDLNYPSFTVVLGPPQTFTRTVTNVGCGREVYTAVVEAPPSISVTIRPSKIFFSKINEKVTYSVTFKRIGSISPSTEFGKGYLKWVSDKHVVRSPISFKFA 807
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 1636417 1639607 + Cp4.1LG05g03970.1 Cpe05g00291 469496

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cpe05g00291 807 Gene3D - 678 806 - -
Cpe05g00291 807 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 97 170 IPR037045 -
Cpe05g00291 807 Gene3D - 394 533 - -
Cpe05g00291 807 Pfam Subtilase family 193 639 IPR000209 GO:0006508|GO:0008236
Cpe05g00291 807 Pfam PA domain 426 511 IPR003137 -
Cpe05g00291 807 CDD Peptidases_S8_3 167 628 IPR034197 -
Cpe05g00291 807 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 96 803 IPR045051 -
Cpe05g00291 807 Gene3D Peptidase S8/S53 domain 195 674 IPR036852 GO:0004252|GO:0006508
Cpe05g00291 807 CDD PA_subtilisin_like 402 526 - -
Cpe05g00291 807 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.7 96 803 - -
Cpe05g00291 807 SUPERFAMILY PA domain 412 507 IPR046450 -
Cpe05g00291 807 Pfam Fibronectin type-III domain 708 803 IPR041469 -
Cpe05g00291 807 PRINTS Subtilisin serine protease family (S8) signature 264 277 IPR015500 -
Cpe05g00291 807 PRINTS Subtilisin serine protease family (S8) signature 591 607 IPR015500 -
Cpe05g00291 807 PRINTS Subtilisin serine protease family (S8) signature 193 212 IPR015500 -
Cpe05g00291 807 ProSiteProfiles Serine proteases, subtilase domain profile. 177 661 - -
Cpe05g00291 807 SUPERFAMILY Protease propeptides/inhibitors 101 155 - -
Cpe05g00291 807 Pfam Peptidase inhibitor I9 101 170 IPR010259 -
Cpe05g00291 807 SUPERFAMILY Subtilisin-like 169 665 IPR036852 GO:0004252|GO:0006508
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe05g00291 - - - cpep:111786140 1334.32
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g00291 Cpe-Chr5:1636417 Cpe01g00036 Cpe-Chr1:241885 1.36E-07 dispersed
Cpe05g00291 Cpe-Chr5:1636417 Cpe18g00316 Cpe-Chr18:4681499 0 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g434 . . . . . . . . . Cmo16g01045 Cma02g01498 . Car02g01261 . . . Cpe05g00291 . . . . . . . . . . . . . . Cone8ag0344 . . . . Csa05g00344 Chy09g01163 . . . Bda07g00509 . . . . . . Cmo02g01539 . . . . . . . Bhi12g00343 . . . Hepe06g1605 . Lcy12g1726 . . . . . . . Lsi09g00337 . . Cme09g01695
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002315 3 2 1 2 2 2 1 1 3 3 2 2 1 2 2 1 2 3 1 1 2 8 1 0 2 5 1 1 2 3 62
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cpe05g00291 Cpe_Chr05 FPKM 0.998765 1.852735 0.0 0.0 0.943734 1.592318 1.286445 0.0 0.0 0.0