Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe05g00344 ATGGAGGGTAAAGAAGAGGACGTCAAGCTCGGAGCCAACAAGTACTCTGAAAGACAACCCATCGGCACATCGGCGCAGACGGACAAGGACTACAAAGAACCCCCACCGGCGCCGCTCTTCGAGCCCGGCGAGCTCTCCTCATGGTCCTTCTACAGAGCCGGAATTGCCGAGTTCGTAGCCACTTTCTTGTTCCTCTACATCACCATTTTGACGGTGATGGGAGTCAGCCGAGCTCCTACCAAGTGCTCCACCGTCGGCATTCAGGGCATTGCTTGGGCCTTCGGCGGCATGATCTTTGCTCTTGTTTACTGCACCGCTGGAATCTCCGGCACCTTCGTTCTCGTCTACACTGTCTTCTCCGCCACCGATGCCAAGAGAAATGCCAGAGACTCTCACGTCCCTATCTTGGCTCCTCTTCCCATTGGGTTTGCTGTGTTTTTGGTTCATTTGGCGACCATTCCCATCACCGGCACCGGCATCAACCCAGCCCGGAGTCTGGGAGCTGCCATCATCTACAACAGGCAGCACGCTTGGGATGACCATGTTATGGATCTTCTGGGTGGGACCTTTCATCGGAGCTGCTCTTGCAGCTATTTACCACCAGATCATAATCAGAGCCATTCCATTCAAGGCCAGAGCTTGAAGACTCAACTACTTCCACTGGAACAGACAGGTCTAGTCGAAATCGAAATGTGTTCCTTTTCTATTCGCTCTTTTGTTTGCTTATTTGGTCCTTCAGGACGACGACTGACATGA 756 52.91 MEGKEEDVKLGANKYSERQPIGTSAQTDKDYKEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITILTVMGVSRAPTKCSTVGIQGIAWAFGGMIFALVYCTAGISGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRQHAWDDHVMDLLGGTFHRSCSCSYLPPDHNQSHSIQGQSLKTQLLPLEQTGLVEIEMCSFSIRSFVCLFGPSGRRLT 251
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 1929953 1934238 + Cp4.1LG05g03360.1 Cpe05g00344 469549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe05g00344 251 Pfam Major intrinsic protein 111 187 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe05g00344 251 SUPERFAMILY Aquaporin-like 45 182 IPR023271 -
Cpe05g00344 251 MobiDBLite consensus disorder prediction 1 35 - -
Cpe05g00344 251 PANTHER AQUAPORIN PIP1-2 ISOFORM X2 110 190 - -
Cpe05g00344 251 PANTHER AQUAPORIN PIP1-2 ISOFORM X2 1 110 - -
Cpe05g00344 251 PRINTS Major intrinsic protein family signature 94 118 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe05g00344 251 PRINTS Major intrinsic protein family signature 52 71 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe05g00344 251 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 1 110 IPR034294 -
Cpe05g00344 251 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 110 190 IPR034294 -
Cpe05g00344 251 Gene3D Glycerol uptake facilitator protein. 37 110 IPR023271 -
Cpe05g00344 251 Gene3D Glycerol uptake facilitator protein. 111 194 IPR023271 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g00344 Cpe-Chr5:1929953 Cpe08g01215 Cpe-Chr8:8878269 2.12E-87 dispersed
Cpe13g00151 Cpe-Chr13:1096359 Cpe05g00344 Cpe-Chr5:1929953 7.02E-45 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe05g00344 K09872 - mnt:21407011 223.402