Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe05g00355 ATGGATGTAGAACAAGAACAAGCTGTCGGACAAAGGGATTCCGAATTAAAGTCTGTAATTTTGTGGTTGTTGATGGCTCGAGAGCTTTGTGAAGGTGAAGAGAAATCGAATGAGATGGTAGTTGGAGGAGGAGGATTTTACTACAATTCGAATTCGAACTTGAACATCCAAACCCAATTCACGAGCCAGATCCAAACTGGGTTTGGATCCGGCGGTGATCCGGCGGAGATGTTCAATTTGGGGACGAACGAGTCAACCGGCGGCGATGAGTTTCATCAGAACATGATGGTGGTTGGGCCGTGGGGGACAGCAGCGCAAGACAGCAATAACAGATTCCATTTAGTCGATGATGATTCTGCTTTGAGATGTGTGTTTCCATGTGAACCCAATGAGAGGCCAAGCCAAGGCCTTTCTTTGTCTCTTAGTTCCTCTAATCCTTCTTCTATTGGCTTACAATCTTTTGAACTCAGACCCCAACAAAATCAACACCAATCATCATCTCTCCCCATTTTTCAGCTTCGAAACTCCAGGTTTCTGGCCCCAGCTCAGGACCTTCTTTATGAGTTTTGTAGCCTTGGAATCACCATTAACAACAACAACAACAACAAACAAGGCCTTGATTTCTCTTCTTCACCAAAACACAAAGGGAATAGGCCAAAACAATGGGAAATGGAAGATGGGTCTTCTTCTACCAAGATTTCTCTCCAATCACTTGATTTCATGGACTTGCAAAGGAGAAAAACCAAGCTTTTTTCCATGCTTGAAGAGGTTGAAAGAAGGTATAGGCATTACTGCGAGCAAATGAAGGCGGTGGTAGCATCATTCGAGGCGGTGGCAGGGAGTGGGGCGGCGAGGGTATACTCAGCGTTGGCTTCGAAGGCGATGTCGAGGCATTTTAGGTGCCTAAAAGATGGGATTGTGGGACAAATTCAGGCCACAAAAAAGGCAATAGAAGAAAAGGATCCAATTACTCCAGGCACCACAAGAGGAGAAACGCCAAGGCTTAAAGTCATCGATCAAGCTTTAAGGCAACAAAGAGCTTTCCATCAAATAAGCATGATGGAAAGCCATCCATGGCGCCCTCAACGTGGCCTCCCTGAGCGTTCTGTTTCTGTTCTTCGCGCTTGGCTTTTCGAACACTTTCTTCACCCGTACCCTAGCGATGTGTCGAATTGGTTCATTAATGCGAGGGTGAGGTTGTGGAAGCCAATGGTAGAAGAGATGTATTTAGAAGAAACCAAGGAGCAAGGAGAAGAAATCAACAACAATTTTAATGGGCATTCTTCCGATGGGGTGGCGGATTTCGACGACGAAATCGATGGTCATCGGTCGATCCCGACACGGTTGGTGGATCAAAAGCCGACACCAGACCAACTCTTGAGAATTGAGTCGGAATGTATGTCTTCAATCATCTCTAACAACTCAGAAAAGAACGGTTCAAGAAGCATGAAAGCAATGGAAAATCAGAGTTTTGGGCGAGTTGGCGTTGATGCATTTGGCACAGTGGAGCTTGACTTCTCATCGTACAACCACCACCACTCCAATAGCGGTGGCGGCGGCGGTGTGTCGTTGACATTAGGGTTACAACAACATGCAACACAAAGCTCGGTTTTCTTCAGAAGAGATGAAATGGAAGAGTGTGAACCGGTTCAATATTCACTTTTAGATGGAGAAACTCAGAATCTTCCTTACAGAAACTTGATGGGTGCTCAATTGCTTCACGACTTGGCCGAATAA 1737 45.71 MDVEQEQAVGQRDSELKSVILWLLMARELCEGEEKSNEMVVGGGGFYYNSNSNLNIQTQFTSQIQTGFGSGGDPAEMFNLGTNESTGGDEFHQNMMVVGPWGTAAQDSNNRFHLVDDDSALRCVFPCEPNERPSQGLSLSLSSSNPSSIGLQSFELRPQQNQHQSSSLPIFQLRNSRFLAPAQDLLYEFCSLGITINNNNNNKQGLDFSSSPKHKGNRPKQWEMEDGSSSTKISLQSLDFMDLQRRKTKLFSMLEEVERRYRHYCEQMKAVVASFEAVAGSGAARVYSALASKAMSRHFRCLKDGIVGQIQATKKAIEEKDPITPGTTRGETPRLKVIDQALRQQRAFHQISMMESHPWRPQRGLPERSVSVLRAWLFEHFLHPYPSDVSNWFINARVRLWKPMVEEMYLEETKEQGEEINNNFNGHSSDGVADFDDEIDGHRSIPTRLVDQKPTPDQLLRIESECMSSIISNNSEKNGSRSMKAMENQSFGRVGVDAFGTVELDFSSYNHHHSNSGGGGGVSLTLGLQQHATQSSVFFRRDEMEECEPVQYSLLDGETQNLPYRNLMGAQLLHDLAE 578
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 1984026 1986329 + Cp4.1LG05g03190.1 Cpe05g00355 469560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe05g00355 578 SMART prehox3 167 308 IPR006563 -
Cpe05g00355 578 MobiDBLite consensus disorder prediction 203 230 - -
Cpe05g00355 578 Gene3D - 389 423 - -
Cpe05g00355 578 PANTHER HOMEOBOX PROTEIN BEL1 HOMOLOG 35 540 - -
Cpe05g00355 578 SUPERFAMILY Homeodomain-like 360 409 IPR009057 -
Cpe05g00355 578 Gene3D - 354 388 - -
Cpe05g00355 578 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 35 540 - -
Cpe05g00355 578 Pfam Associated with HOX 173 306 IPR006563 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe05g00355 Cpe13g00140 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g00355 Cpe-Chr5:1984026 Cpe05g01122 Cpe-Chr5:7581995 6.83E-79 dispersed
Cpe13g00140 Cpe-Chr13:1007021 Cpe05g00355 Cpe-Chr5:1984026 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe05g00355 - - cmo:103482774 740.339