Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe05g00357 ATGGCTACTAAAGACTCGAGTTCTGCGAGTGAGGGCAAGATTAAAGGGGTTCTCACCCATGGCGGCCGATATGTGCAGTATAACGTCTATGGTAACTTGTTTGAGGTTTCGGCTAAGTATGTTCCTCCTTTGCGACCCATTGGTAGAGGCGCTTATGGTCTTGTTTGTGCTGCTGTAAATTCAGAGACACATGAGGAGGTTGCTATCAAGAAAATTGGAAATGCATTTGATAATATAATCGATGCCAAGAGGACATTGAGAGAAATTAAGCTTCTTTGCCACATGGAACATGAAAATATTATTGCCATCAGAGACATCATTCGACCCCCAAAAAGAGAGGTCTTTAATGATGTGTACATTGTTTACGAGTTGATGGATACCGATCTTCATCAAATAATTCGCTCTGACCAATCGCTGACAGATGACCATTGCCAGTACTTTATGTATCAGTTATTGCGCGGGCTGAAATATGTACATTCAGCCAAGGTCCTGCACCGTGATCTGAAGCCAAGCAACCTGCTACTGAATGCAAACTGCGACCTTAAAATTGGAGACTTTGGGTTGGCAAGGACAACGTCTGAAACTGACTTCATGACTGAATATGTGGTCACTCGCTGGTACCGAGCGCCAGAATTGCTGCTCAATTGTTCGGAGTACACTGCCGCCATTGATGTCTGGTCTGTTGGATGCATACTTGGTGAGATCATGACCCGAGAGCCTCTCTTCCCTGGAAAAGATTATGTTCATCAACTAAGACTTATAACTGAGCTACTTGGATCACCAGACGATGCCAGTCTAGGATTTCTTCGAAGCGATAACGCTCGAAGATATGTCAAGCAGCTTCCTCAGTACAAGAAACAACAATTCTCAACTAGATTTCCCAACATGTCTCCAGCTGCCGTGGATCTTCTAGAAAAGATGCTCGTGTTTGATCCAAACAAACGCATCACAGTTGAGGAGGCACTCTGTCATCCATACTTGCAATCTCTTCACGACATCAACGACGAGCCAGTGTGTGGCAGACCTTTCAATTTCGATTTCGAGCAACCATCGTGCACTGAAGAGCATATCAAAGAACTGATCTGGAAAGAATGTGTCCGGTTCAACCCTGATGAATCAGCGAGGAGGACGACCCTTTGCGTTTAA 1146 44.68 MATKDSSSASEGKIKGVLTHGGRYVQYNVYGNLFEVSAKYVPPLRPIGRGAYGLVCAAVNSETHEEVAIKKIGNAFDNIIDAKRTLREIKLLCHMEHENIIAIRDIIRPPKREVFNDVYIVYELMDTDLHQIIRSDQSLTDDHCQYFMYQLLRGLKYVHSAKVLHRDLKPSNLLLNANCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDVWSVGCILGEIMTREPLFPGKDYVHQLRLITELLGSPDDASLGFLRSDNARRYVKQLPQYKKQQFSTRFPNMSPAAVDLLEKMLVFDPNKRITVEEALCHPYLQSLHDINDEPVCGRPFNFDFEQPSCTEEHIKELIWKECVRFNPDESARRTTLCV 381
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 1990847 1994800 - Cp4.1LG05g03130.1 Cpe05g00357 469562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe05g00357 381 ProSiteProfiles Protein kinase domain profile. 41 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe05g00357 381 ProSitePatterns Protein kinases ATP-binding region signature. 47 71 IPR017441 GO:0005524
Cpe05g00357 381 SUPERFAMILY Protein kinase-like (PK-like) 44 335 IPR011009 -
Cpe05g00357 381 Gene3D Transferase(Phosphotransferase) domain 1 125 354 - -
Cpe05g00357 381 CDD STKc_TEY_MAPK 34 370 - -
Cpe05g00357 381 Pfam Protein kinase domain 45 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe05g00357 381 Gene3D Phosphorylase Kinase; domain 1 24 364 - -
Cpe05g00357 381 ProSitePatterns MAP kinase signature. 76 179 IPR003527 GO:0004707|GO:0005524|GO:0006468
Cpe05g00357 381 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 16 372 - -
Cpe05g00357 381 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672|GO:0006468
Cpe05g00357 381 SMART serkin_6 41 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe05g00357 381 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 11-RELATED 16 372 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe05g00357 Cpe13g00136 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g00357 Cpe-Chr5:1990847 Cpe12g00387 Cpe-Chr12:2759463 0 dispersed
Cpe13g00136 Cpe-Chr13:984706 Cpe05g00357 Cpe-Chr5:1990847 0 wgd
Cpe20g00780 Cpe-Chr20:6989381 Cpe05g00357 Cpe-Chr5:1990847 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62392 PF00069 Pkinase 1.30E-71 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe05g00357 - - csv:101214254 759.599