Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe05g00421 ATGACTACATTAGCTAGTACTTCCAAAATTGTTGAATCAACGGAAGAATTTGATTCTGAGAAAGCTAGGACAAGTTACACGATAGATGTAGGAAAAAGGTTTTCAATAGAGGATGACATTAATCGTCTGTTTCAGGCAATTGATATCAGAACGTTACGTAACAGGTCAGGTCAGCAACATGGAGTTGATAAAGATGCGTTGCAAAAGAGTGCGATGAAGCGACCAATGAGAGTGGGTTCATCTCACATGGCAGGGATTGGAATTTCTGAGCCTGCAAGCTTAAAGCAGGCTTTGAGGGGCTTATGCATATCTCAGGCTGCAGAAATGGCTGCTGCAAAGAGGTTAACGAGGTCTTTAGGTTCACCTGGAATCTCTGAAGCAGGAACTATCAAAAGGTTGTATAAGGCTGTGGTGGTTGAGGCCAATGGATCTGATGTGCGAATAAATGAAAGCAAAGAAAATTTGGTAGAAATTTCCTTCGTTTCAGAAATTATGTCTACTTTTCAGAATAAGATGCCTGAATTGTTGCATAAAACTGAGGCAGATATATCAAACCAGGGTGCTGAGTTTTCACTTTTTAAGAACAGTGGGGTATCAGAAGAGGCAGATGTGGATAGATTGATGTCAAAGGATCTTATAGAAGTGACAAGTATAAAGCCACTTAAATCTCCTTCCTTCACTCCTTCTGGTGAGAAGGATCCGACTCTGAACAGCTTGGATAATTCCTCAACTGAAGATTTGGCAAAAAATTCAGTGCCAGAGGAGAAAGGTACAATGCGTTGTTTATCCTCTCTATCAAGCTCTGGATCTGTTATTTGGCCGAACAAATCAGCTTTCAATAATACACGTTTCATCAAACCTATTTTCAGGACCAAAAACTCTGTCAAGAAGAAAGCAAAACTTGAACCCATTTCCTCCCCTAGTGCGTTTGAAATGCGTACAGTGATGGTTGACACTGATTTGGGTTCCATATCCGAAAAGTTTGAGAACCGAATGCCAGAAAATGCCCAGAATCATGAGAGTAAAGAAAAAGAGATAGGTTCCTCTATCTCTAGTAGCACAACTTTAGGTATTGAAGTAAGTGCAAATCTAGTAAACACAGAGTCCAGTGGACCTGGTACATCTCTCAACTGCTGTAACAGGATCAGGCCAACTATTATGCCATTCGATGAGAGATCCAGATCAAGAGAGAAAGGGATGTTCTCTCAGAGCTCTAAAAGTAGTAGTATTGGTGAATGTAGCCATAGCCCAAGCATCAGTGGGGAAAGCATTCTCAGTGGATCAAGTTGTAGTGGAGTAAGGCCTCACATGTCAAAGGACTTGAAATGGGAAGCTATCCACCACATTCAGGGTCAATATAAATGCCTAAGTCTGAAAAACTTCAATCTGTTAAGGAGACTTGGTCTCGGGGACATTGGGACTGTATATCTCTCTGAGCTATGCAATTCCAGCTGTCTATTTGCTATCAAAGTGATGGACAAAGAGTTCTTGGCAAGCAGAAAAAAAATACTTCGGGCACAAACTGAGAGAGAGATACTGGAAATACTTGACCATCCATTTCTCCCTACACTATATGCTCATTTTGAGACGGATGAGCAATCATGCTTGGTCATGGACTACTGTCCTGGTGGAGATCTCCATGTGCTGCAACAAAAGCAACCATGCAAGAGTTTCTCTGAGCATGCAGTCAGGTTCTATGTTGCCGAGATTCTTCTTGCCCTGGAGTACTTACACATGCAAGGCGTTATTTACCGAGACCTGAAACCCAAAAATGTTCTGGTCCGAGAAGATGGGCACATAATGCTCACAGATTTTGATTTGTCTCTTAGATGTGCTGTTAATCCAATGCTGCTTCAATCATCATCTCCAGTTGTGGAATCCACCAAGAGGAAGTTGAATCCCTGTGATGAATCTAGTTGCATTGACCCTTTCTGCCTCCACCCATCCTGGCAGGTCTCATGCTTCACCCCCAAAGTTTTATCTGCTCCATACAAATCTCGGAGAACAAAAGCAGACAATCAGGCTAGTCTATTACCACAGCTTATTGTCGAGCCAACTGGTGTGCGGTCCAATTCATTCGTAGGAACCCACGAATACCTCGCTTCTGAGATTGTTAAGGGTGATGGCCATGGGAGTGCTGTTGATTGGTGGACTTACGGGATTTTCCTGTTTGAGCTACTTTATGGTAAGACTCCCTTCAAAGGTTCAGGAAATGAGGACACATTAGCGAACATAGTATCCCACACCCTCAAGTTCCCTGATAGCCCCATAGTTAGCTTTCATGCAAGAGATCTAATCAGATGTCTGTTGGCGAAGGAGCCTGAAAACCGATTAGGCGCAACAAAAGGAGCTATTGAGATAAAGCAGCATCCATTTTTTGAAGGCATCAATTGGGCTCTGATACGTTGTGCAGTTCCACCTGAGCTTCCCAAGTTCTTCAACGATGGAACTGGTGCAGTGCCAGTGGATCCCGGGGAGAACACAAAGTGTAGAGATCTCGAGAATATGGAAGCGGATGCAGCAATCTTCGACCTGTTTTAG 2541 43.01 MTTLASTSKIVESTEEFDSEKARTSYTIDVGKRFSIEDDINRLFQAIDIRTLRNRSGQQHGVDKDALQKSAMKRPMRVGSSHMAGIGISEPASLKQALRGLCISQAAEMAAAKRLTRSLGSPGISEAGTIKRLYKAVVVEANGSDVRINESKENLVEISFVSEIMSTFQNKMPELLHKTEADISNQGAEFSLFKNSGVSEEADVDRLMSKDLIEVTSIKPLKSPSFTPSGEKDPTLNSLDNSSTEDLAKNSVPEEKGTMRCLSSLSSSGSVIWPNKSAFNNTRFIKPIFRTKNSVKKKAKLEPISSPSAFEMRTVMVDTDLGSISEKFENRMPENAQNHESKEKEIGSSISSSTTLGIEVSANLVNTESSGPGTSLNCCNRIRPTIMPFDERSRSREKGMFSQSSKSSSIGECSHSPSISGESILSGSSCSGVRPHMSKDLKWEAIHHIQGQYKCLSLKNFNLLRRLGLGDIGTVYLSELCNSSCLFAIKVMDKEFLASRKKILRAQTEREILEILDHPFLPTLYAHFETDEQSCLVMDYCPGGDLHVLQQKQPCKSFSEHAVRFYVAEILLALEYLHMQGVIYRDLKPKNVLVREDGHIMLTDFDLSLRCAVNPMLLQSSSPVVESTKRKLNPCDESSCIDPFCLHPSWQVSCFTPKVLSAPYKSRRTKADNQASLLPQLIVEPTGVRSNSFVGTHEYLASEIVKGDGHGSAVDWWTYGIFLFELLYGKTPFKGSGNEDTLANIVSHTLKFPDSPIVSFHARDLIRCLLAKEPENRLGATKGAIEIKQHPFFEGINWALIRCAVPPELPKFFNDGTGAVPVDPGENTKCRDLENMEADAAIFDLF 846
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2400344 2407141 + Cp4.1LG05g04170.1 Cpe05g00421 469626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe05g00421 846 SUPERFAMILY Protein kinase-like (PK-like) 439 813 IPR011009 -
Cpe05g00421 846 MobiDBLite consensus disorder prediction 392 430 - -
Cpe05g00421 846 ProSiteProfiles Protein kinase domain profile. 461 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe05g00421 846 MobiDBLite consensus disorder prediction 223 248 - -
Cpe05g00421 846 MobiDBLite consensus disorder prediction 400 430 - -
Cpe05g00421 846 MobiDBLite consensus disorder prediction 223 256 - -
Cpe05g00421 846 Gene3D Transferase(Phosphotransferase) domain 1 689 810 - -
Cpe05g00421 846 Gene3D Transferase(Phosphotransferase) domain 1 541 609 - -
Cpe05g00421 846 Gene3D Phosphorylase Kinase; domain 1 459 540 - -
Cpe05g00421 846 PANTHER FLIPPASE KINASE 1-RELATED 1 817 - -
Cpe05g00421 846 PANTHER SERINE/THREONINE-PROTEIN KINASE D6PKL1 ISOFORM X1 1 817 - -
Cpe05g00421 846 Pfam Protein kinase domain 690 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe05g00421 846 Pfam Protein kinase domain 462 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe05g00421 846 ProSitePatterns Serine/Threonine protein kinases active-site signature. 582 594 IPR008271 GO:0004672|GO:0006468
Cpe05g00421 846 SMART serkin_6 461 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe05g00421 846 CDD STKc_phototropin_like 459 811 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe05g00421 Cpe16g00796 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g00421 Cpe-Chr5:2400344 Cpe10g00271 Cpe-Chr10:1615268 0 dispersed
Cpe16g00796 Cpe-Chr16:7783762 Cpe05g00421 Cpe-Chr5:2400344 0 wgd
Cpe19g00458 Cpe-Chr19:4046135 Cpe05g00421 Cpe-Chr5:2400344 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62395 PF00069 Pkinase 3.30E-35 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe05g00421 - - cpep:111777395 1342.79