Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe05g00498 ATGGCTTCGTTGGCGCTTACTTCCTCGTTTCTCCCTTCTCTCCAATCGCGCCGTCGGAAACCCGAGGTAAATGCTCAAATCCGCTTCTCCTCTCTCCGTTCAAGTCTTCCTAAAACCGCCATTTTCGATAGCGGTATCAGAACTAGCTTCCGCATTCCGTCTTCTCTATCCAGTGAAGCTAAATCGATTAAACCAGCTCTAGATTTCAGAAGCTCTCGTGGAAATCTCGGTACCTTTACTGTCCGAGCGGCTTCCTCTTCTCCTGCTACTGTAGCTCCGGCTTCTCAGCCATGGCAAGGTGCGGCGATTAAACCACTTATTGCTTCCATTGCTACGGGTATCATTCTGTGGTTTGTTCCGGTGCCGTCTGGTGTTTCTCGAAACGCGTGGCAATTGCTTGCGATTTTCCTTGCTACGATTGTTGGGATTATTACTCAGCCTTTGCCCCTTGGTGCGGTTGCTTTGCTTGGACTTGGCGCCTCTGTTCTAACTAAAACCCTAACCTTCTCTGCTGCTTTCTCTGCGTTTGGTGATCCGATCCCATGGCTCATCGCTCTTGCCTTCTTCTTTGCTCGAGGGTTCATTAAGACCGGACTTGGTAATCGAATTGCTTATCAATTTGTTTCTCTATTCGGTAGTTCCACGTTAGGGTTAGGGTATAGTTTAGTGTTCAGTGAGGCTCTGTTGGCGCCGGCAATTCCTTCGGTGTCTGCCAGAGCAGGAGGAATATTCCTTCCATTGGTGAAATCGCTCTGTGTTGCTTGCGGTAGCAATGCTGGTGATGGCACAGAAAAACGGTTGGGATCGTGGTTGATGCTCACTTGCTTTCAAACTTCGGTGATTTCATCGTCCATGTTCTTGACGGCTATGGCTGCTAATCCTCTGAGTGCCACTCTGACGTATAACACGATCAAGCAGACCATTGGATGGACCGACTGGGCTAAAGCAGCGATTGTTCCAGGATTAATCTCCTTGATTGTGGTGCCATTGCTTCTGTATGTAATCTATCCGCCCACCGTGAAGAGCAGTCCAGACGCACCCAAGCTTGCCAGAGAGAAGTTAGAAAAGATGGGACCAATGTCCAACAATGAGATTATAATGGCTGGAACTCTACTTCTCACGGTGGGTCTTTGGGTTTTTGGAGGGGTTCTTAATGTGGACGCTGTTACTGCTGCCATTTTGGGATTGTCCGTCCTTCTTGTGACTGGGGTGGTGACATGGAAAGAGTGCTTGGCAGAAGCTGTTGCCTGGGACACTCTAACATGGTTTGCTGCACTCATTGCAATGGCAGGGTATCTCAACAAATATGGTCTCATCTCCTGGTTCAGCCAAACTGTAGTGAAGTTTGTTGGTGGACTTGAGCTTTCATGGCAGCTTTCATTCGGCATTTTAGTTCTTCTCTATTTCTACTCCCACTACTTCTTTGCGAGTGGAGCTGCTCATATAGGCGCTATGTTTACAGCCTTCTTATCCGTTGCTAGTGCTTTGGGGACTCCCCCCTACTTCGGAGCCATTGTACTTTCCTTCTTATCCAACCTGATGGGTGGCTTAACCCACTACGGCATTGGGTCAGCCCCTGTCTTCTATGGTGCCAACTATGTTCCTCTTGCTCAGTGGTGGGGCTACGGGTTCCTCATATCTGTTGTCAACATCATTATCTGGCTCGGCGCTGGGGGAATTTGGTGGAAGGCCATTGGTCTATGGTGA 1707 48.92 MASLALTSSFLPSLQSRRRKPEVNAQIRFSSLRSSLPKTAIFDSGIRTSFRIPSSLSSEAKSIKPALDFRSSRGNLGTFTVRAASSSPATVAPASQPWQGAAIKPLIASIATGIILWFVPVPSGVSRNAWQLLAIFLATIVGIITQPLPLGAVALLGLGASVLTKTLTFSAAFSAFGDPIPWLIALAFFFARGFIKTGLGNRIAYQFVSLFGSSTLGLGYSLVFSEALLAPAIPSVSARAGGIFLPLVKSLCVACGSNAGDGTEKRLGSWLMLTCFQTSVISSSMFLTAMAANPLSATLTYNTIKQTIGWTDWAKAAIVPGLISLIVVPLLLYVIYPPTVKSSPDAPKLAREKLEKMGPMSNNEIIMAGTLLLTVGLWVFGGVLNVDAVTAAILGLSVLLVTGVVTWKECLAEAVAWDTLTWFAALIAMAGYLNKYGLISWFSQTVVKFVGGLELSWQLSFGILVLLYFYSHYFFASGAAHIGAMFTAFLSVASALGTPPYFGAIVLSFLSNLMGGLTHYGIGSAPVFYGANYVPLAQWWGYGFLISVVNIIIWLGAGGIWWKAIGLW 568
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2934413 2938437 - Cp4.1LG05g05040.1 Cpe05g00498 469703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe05g00498 568 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 80 568 IPR030676 -
Cpe05g00498 568 TIGRFAM dass: transporter, divalent anion:Na+ symporter (DASS) family 120 562 IPR001898 GO:0016020|GO:0022857|GO:0055085
Cpe05g00498 568 CDD ArsB_NhaD_permease 140 562 - -
Cpe05g00498 568 PANTHER DICARBOXYLATE TRANSPORTER 1, CHLOROPLASTIC 80 568 - -
Cpe05g00498 568 Pfam Sodium:sulfate symporter transmembrane region 105 568 IPR001898 GO:0016020|GO:0022857|GO:0055085
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe05g00498 Cpe16g00884 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00362 Cpe-Chr1:2083798 Cpe05g00498 Cpe-Chr5:2934413 5.81E-59 dispersed
Cpe05g00498 Cpe-Chr5:2934413 Cpe14g00202 Cpe-Chr14:1139196 5.23E-156 dispersed
Cpe16g00884 Cpe-Chr16:8330624 Cpe05g00498 Cpe-Chr5:2934413 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe05g00498 - - bhj:120088316 957.592