Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe05g00500 ATGGATTCAGAGGATTTGAGAGATTACTACAAGACTGGTACAACAAAGGAGGCCTCTTGGAGGGTGTCACAGCTCAAAGCCTTACGCCAACTTATAGAACACAATGAACACCAAATTTACACCGCCCTTATGCAGGATTTGGGGAAACACCAAGTTGAAGCTTTTAGAGATGAGATTGGTACTCTGCTTAAGTCCCTCAACTCTGCTTTGGATAATTTGAAGCATTGGATGTCACCCAAAAAGGCAAAGCTGCCATTAATAGCGTTGTTAAGCTCAGCTGAAATGGTTCCTCAGCCTTTGGGCGTTGTTCTTATAATCTCATCTTGGAATTTTCCGATTGGGTTGTCGTTGGAGCCGTTGATTGGAGCAATAGCTGCCGGAAATTGCGTGGTTTTGAAGACGTCGGAGTCTGCTCCGGCGAGTTCGGCTTTACTGGCGAATACCATCGGGAAATATATTGATAATAAAGCTGTGAGGGTTGTGGAAGGTGGGGCGGCGGCTGGGGAGCGGCTGCTGCAGCAGCGGTGGGAGAAGATTTTCTTTACAGGTGGAAGAAGTGAACGAGTGGGGCGGATTGTTATGGCGGCCGCCGCGAAACACCTGACGCCGGTGACTTTGGAGCTCGGCGGGAAGTGCCCGGCCATCGTTGACTCACTCCCATTCTCTTGGGACATTGAGGCTACTGCCAAACGGATCGTCATCGGAAAATTCGGGAACTGCGCCGGTCAAGCTTGCATTGCGATCGATTATGTCCTCATTGAACATAGGTTTATACCTACCTTGGTCGAATTGATGAAGAAGTTTATCAAGGAATTCTTCGATAGAAGTTCGAACCAGGCAAAAACCATGGCGAGGATCGTAAACAAACAAAATTTCTTGAGATTGAAGAATCTGGTGGATAAACCTGACGTACGAGCTTCGATCATCTATGGGGGATCCATGGACGAAGACAAATTGTTTGTTGAGCCGACTATTCTGTTGAATCCGCCAAGCGATTCAGAAATTATGACGGATGAAATCTTCGGACCATTGCTTCCCATAATTGGACTGGACAGGATTGAAGACAGTATAGATTTCATCAATTCAAAGCCTAAGCCTCTCGCCGTTTATGCCTTCACGAAGGATAAAGCTTTCCAAAGGAGACTCGTCTCAGAAACCTCGTCCGGTAGTTTGACATTCAATGATGCAATTATTCAGTATGCAGCCGATACACTCCCGTTTGGAGGGGTTGGTGAAAGTGGGATTGGAAGGTACCATGGAAAATTCTCATTCGACACTTTTAGTCATGAAAAGGCTGTTCTGCAGAGGAGCTTTTTGGTTGACTTCTGGTTCAGATATCCGCCATGGAACAGTCACAAGCTTCAGCTGCTTCGAGAAGCTTACAGTCTTAACTATTTTCAGCTTGTTCTCACTGTTTTGGGTTTGAAGAAGTCTTAA 1437 46.21 MDSEDLRDYYKTGTTKEASWRVSQLKALRQLIEHNEHQIYTALMQDLGKHQVEAFRDEIGTLLKSLNSALDNLKHWMSPKKAKLPLIALLSSAEMVPQPLGVVLIISSWNFPIGLSLEPLIGAIAAGNCVVLKTSESAPASSALLANTIGKYIDNKAVRVVEGGAAAGERLLQQRWEKIFFTGGRSERVGRIVMAAAAKHLTPVTLELGGKCPAIVDSLPFSWDIEATAKRIVIGKFGNCAGQACIAIDYVLIEHRFIPTLVELMKKFIKEFFDRSSNQAKTMARIVNKQNFLRLKNLVDKPDVRASIIYGGSMDEDKLFVEPTILLNPPSDSEIMTDEIFGPLLPIIGLDRIEDSIDFINSKPKPLAVYAFTKDKAFQRRLVSETSSGSLTFNDAIIQYAADTLPFGGVGESGIGRYHGKFSFDTFSHEKAVLQRSFLVDFWFRYPPWNSHKLQLLREAYSLNYFQLVLTVLGLKKS 478
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2955599 2958999 + Cp4.1LG05g05000.1 Cpe05g00500 469705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe05g00500 478 PANTHER ALDEHYDE DEHYDROGENASE 4 478 - -
Cpe05g00500 478 PANTHER ALDEHYDE DEHYDROGENASE 4 478 IPR012394 GO:0006081
Cpe05g00500 478 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 7 431 IPR016162 GO:0016491
Cpe05g00500 478 PIRSF ALDH 2 472 IPR012394 GO:0006081
Cpe05g00500 478 Pfam Aldehyde dehydrogenase family 17 433 IPR015590 GO:0016491
Cpe05g00500 478 SUPERFAMILY ALDH-like 7 450 IPR016161 GO:0016491
Cpe05g00500 478 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 210 413 IPR016163 GO:0016620
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g00500 Cpe-Chr5:2955599 Cpe14g00552 Cpe-Chr14:3505085 0 dispersed
Cpe05g00500 Cpe-Chr5:2955599 Cpe02g00556 Cpe-Chr2:3321380 2.49E-154 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe05g00500 K00128 - csv:101205263 777.319