Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe05g00507 ATGGATCCGCCTCACCCATCCCCACCGGAGCTTCGTCTTCCTAATCTCACTCCCCTCAAGCTACTCGGACAAGGAGCCATGGGGACTGTCTTTCTCGTCCACGACCATCTCCTTGATCACGCGGCTAATTTCCCCTTTGCGCTCAAGGTTGTCCACAAATCGTCTTTTGTCGCTAAGCACCACGCCGAGCGCCGCGCTCGTTGGGAGATTCAGGTTCTTTCCCGTTTATCACTCCCTAAACCACACCCCTTTCTCCCTGACCTCATTGGATCCTTCGAGTCCGACGAGTTTTTGGGCTGGGCTGTTCCGTACTGTCCTGGTGGGGACCTTAACGTCTTGCGTTACCGCCAAATGGACCGGGTCTTCTCGCCAGCTGTCATTCGGTTTTATTTGGCTGAGATCGTCTGTGCGCTAGAGCATCTTCATAGCATCGACATCGTTTACCGAGATTTGAAGCCGGAGAATGTATTGATTCAACAATCAGGTCATGTCACTCTAACCGATTTTGATTTGTCGCGTAAGTTGACTCGTAAGACAGTGAAAGATGTCGTTTCGCTTGATGATTCCGGCCACGAGAAGCTGCCGGTTGTCGCTGCCCGGCGGAACTTTACGCGATGGATTGTGGGGACCGCTAAAGTCAAAAAGGGTTTGAGAAAGGCTAAATCGGCTCGGGTTAGTCCTGTGAGCCGTTGGAAATCGGGTTTAATAACTAATAATGGCGAACGGTCGAACTCGTTTGTTGGAACGGAGGAGTACGTTTCGCCGGAAATCATTCGAGGTGAGGGACATGAATTCGCCGTTGACTGGTGGGCCTTGGGAATTCTCACGTACGAGATGCTCTATGGGAAGACGCCGTTTAAGGGGACTAACCGTAAACAAACGTTTAGGAACGTTCTAGTTAAAGCCCCAGAGCTAATCGGAAAGCGTTCAGATTTAACGGATTTGATCGAACGGTTGCTGGTGAAGGACCCCACCAAGCGATTGGGGTACACCCGAGGCGCGTGTGAGATAAAAGAGCATGCGTTTTTTAACGGCGTTAAGTGGGACATATTAACGGAAGTCACGCGACCGCCATTTTTACCGGCTCGTGAAGAAACAGGATGGAGGGAGAATAAAGCCCCCGGTGGTGTGGGTATAGAGGAATACTTCCATAGACAGAGATCGCCGCCTTCATTTCCAGCGTCCCCGTCGCCGTCGTCATCGCCGTCAACCTCCTTCCATCTGCACAATAACGGCATATGTTTAGCAGAGTTCTAA 1257 51.31 MDPPHPSPPELRLPNLTPLKLLGQGAMGTVFLVHDHLLDHAANFPFALKVVHKSSFVAKHHAERRARWEIQVLSRLSLPKPHPFLPDLIGSFESDEFLGWAVPYCPGGDLNVLRYRQMDRVFSPAVIRFYLAEIVCALEHLHSIDIVYRDLKPENVLIQQSGHVTLTDFDLSRKLTRKTVKDVVSLDDSGHEKLPVVAARRNFTRWIVGTAKVKKGLRKAKSARVSPVSRWKSGLITNNGERSNSFVGTEEYVSPEIIRGEGHEFAVDWWALGILTYEMLYGKTPFKGTNRKQTFRNVLVKAPELIGKRSDLTDLIERLLVKDPTKRLGYTRGACEIKEHAFFNGVKWDILTEVTRPPFLPAREETGWRENKAPGGVGIEEYFHRQRSPPSFPASPSPSSSPSTSFHLHNNGICLAEF 418
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 3007967 3009223 + Cp4.1LG05g04970.1 Cpe05g00507 469712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe05g00507 418 PANTHER FLIPPASE KINASE 1-RELATED 11 390 - -
Cpe05g00507 418 Gene3D Phosphorylase Kinase; domain 1 18 108 - -
Cpe05g00507 418 MobiDBLite consensus disorder prediction 386 406 - -
Cpe05g00507 418 SMART serkin_6 16 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe05g00507 418 Gene3D Transferase(Phosphotransferase) domain 1 239 362 - -
Cpe05g00507 418 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672|GO:0006468
Cpe05g00507 418 Pfam Protein kinase domain 19 182 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe05g00507 418 Pfam Protein kinase domain 238 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe05g00507 418 Gene3D Transferase(Phosphotransferase) domain 1 109 178 - -
Cpe05g00507 418 ProSitePatterns Protein kinases ATP-binding region signature. 22 49 IPR017441 GO:0005524
Cpe05g00507 418 ProSiteProfiles Protein kinase domain profile. 16 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe05g00507 418 SUPERFAMILY Protein kinase-like (PK-like) 14 404 IPR011009 -
Cpe05g00507 418 PANTHER SERINE/THREONINE-PROTEIN KINASE UCNL 11 390 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe05g00507 Cpe16g00891 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g00507 Cpe-Chr5:3007967 Cpe17g01122 Cpe-Chr17:8500899 3.28E-86 dispersed
Cpe16g00891 Cpe-Chr16:8376300 Cpe05g00507 Cpe-Chr5:3007967 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62402 PF00069 Pkinase 7.30E-30 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe05g00507 - K08286 csv:101207338 642.114