Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe05g00507 | ATGGATCCGCCTCACCCATCCCCACCGGAGCTTCGTCTTCCTAATCTCACTCCCCTCAAGCTACTCGGACAAGGAGCCATGGGGACTGTCTTTCTCGTCCACGACCATCTCCTTGATCACGCGGCTAATTTCCCCTTTGCGCTCAAGGTTGTCCACAAATCGTCTTTTGTCGCTAAGCACCACGCCGAGCGCCGCGCTCGTTGGGAGATTCAGGTTCTTTCCCGTTTATCACTCCCTAAACCACACCCCTTTCTCCCTGACCTCATTGGATCCTTCGAGTCCGACGAGTTTTTGGGCTGGGCTGTTCCGTACTGTCCTGGTGGGGACCTTAACGTCTTGCGTTACCGCCAAATGGACCGGGTCTTCTCGCCAGCTGTCATTCGGTTTTATTTGGCTGAGATCGTCTGTGCGCTAGAGCATCTTCATAGCATCGACATCGTTTACCGAGATTTGAAGCCGGAGAATGTATTGATTCAACAATCAGGTCATGTCACTCTAACCGATTTTGATTTGTCGCGTAAGTTGACTCGTAAGACAGTGAAAGATGTCGTTTCGCTTGATGATTCCGGCCACGAGAAGCTGCCGGTTGTCGCTGCCCGGCGGAACTTTACGCGATGGATTGTGGGGACCGCTAAAGTCAAAAAGGGTTTGAGAAAGGCTAAATCGGCTCGGGTTAGTCCTGTGAGCCGTTGGAAATCGGGTTTAATAACTAATAATGGCGAACGGTCGAACTCGTTTGTTGGAACGGAGGAGTACGTTTCGCCGGAAATCATTCGAGGTGAGGGACATGAATTCGCCGTTGACTGGTGGGCCTTGGGAATTCTCACGTACGAGATGCTCTATGGGAAGACGCCGTTTAAGGGGACTAACCGTAAACAAACGTTTAGGAACGTTCTAGTTAAAGCCCCAGAGCTAATCGGAAAGCGTTCAGATTTAACGGATTTGATCGAACGGTTGCTGGTGAAGGACCCCACCAAGCGATTGGGGTACACCCGAGGCGCGTGTGAGATAAAAGAGCATGCGTTTTTTAACGGCGTTAAGTGGGACATATTAACGGAAGTCACGCGACCGCCATTTTTACCGGCTCGTGAAGAAACAGGATGGAGGGAGAATAAAGCCCCCGGTGGTGTGGGTATAGAGGAATACTTCCATAGACAGAGATCGCCGCCTTCATTTCCAGCGTCCCCGTCGCCGTCGTCATCGCCGTCAACCTCCTTCCATCTGCACAATAACGGCATATGTTTAGCAGAGTTCTAA | 1257 | 51.31 | MDPPHPSPPELRLPNLTPLKLLGQGAMGTVFLVHDHLLDHAANFPFALKVVHKSSFVAKHHAERRARWEIQVLSRLSLPKPHPFLPDLIGSFESDEFLGWAVPYCPGGDLNVLRYRQMDRVFSPAVIRFYLAEIVCALEHLHSIDIVYRDLKPENVLIQQSGHVTLTDFDLSRKLTRKTVKDVVSLDDSGHEKLPVVAARRNFTRWIVGTAKVKKGLRKAKSARVSPVSRWKSGLITNNGERSNSFVGTEEYVSPEIIRGEGHEFAVDWWALGILTYEMLYGKTPFKGTNRKQTFRNVLVKAPELIGKRSDLTDLIERLLVKDPTKRLGYTRGACEIKEHAFFNGVKWDILTEVTRPPFLPAREETGWRENKAPGGVGIEEYFHRQRSPPSFPASPSPSSSPSTSFHLHNNGICLAEF | 418 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 3007967 | 3009223 | + | Cp4.1LG05g04970.1 | Cpe05g00507 | 469712 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe05g00507 | 418 | PANTHER | FLIPPASE KINASE 1-RELATED | 11 | 390 | - | - | |
Cpe05g00507 | 418 | Gene3D | Phosphorylase Kinase; domain 1 | 18 | 108 | - | - | |
Cpe05g00507 | 418 | MobiDBLite | consensus disorder prediction | 386 | 406 | - | - | |
Cpe05g00507 | 418 | SMART | serkin_6 | 16 | 343 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe05g00507 | 418 | Gene3D | Transferase(Phosphotransferase) domain 1 | 239 | 362 | - | - | |
Cpe05g00507 | 418 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 146 | 158 | IPR008271 | GO:0004672|GO:0006468 | |
Cpe05g00507 | 418 | Pfam | Protein kinase domain | 19 | 182 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe05g00507 | 418 | Pfam | Protein kinase domain | 238 | 343 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe05g00507 | 418 | Gene3D | Transferase(Phosphotransferase) domain 1 | 109 | 178 | - | - | |
Cpe05g00507 | 418 | ProSitePatterns | Protein kinases ATP-binding region signature. | 22 | 49 | IPR017441 | GO:0005524 | |
Cpe05g00507 | 418 | ProSiteProfiles | Protein kinase domain profile. | 16 | 343 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe05g00507 | 418 | SUPERFAMILY | Protein kinase-like (PK-like) | 14 | 404 | IPR011009 | - | |
Cpe05g00507 | 418 | PANTHER | SERINE/THREONINE-PROTEIN KINASE UCNL | 11 | 390 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe05g00507 | Cpe16g00891 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe05g00507 | Cpe-Chr5:3007967 | Cpe17g01122 | Cpe-Chr17:8500899 | 3.28E-86 | dispersed | |
Cpe16g00891 | Cpe-Chr16:8376300 | Cpe05g00507 | Cpe-Chr5:3007967 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
62402 | PF00069 | Pkinase | 7.30E-30 | CL0016 | Cpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe05g00507 | - | K08286 | csv:101207338 | 642.114 |