Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cpe05g00517 | ATGGCAGCTGCAGCTTCTAACATTCAGATAGCGACACTAAAACACTACCAATTGCCCTCAAGGAAAGGCTTCAAGCCATTTGGAACTACCCTTAGTGGCAATTCTAAAGCTCCATCATTCGCTAAGCTTTCGAGTTCTAGCAATATATCATCTTTACCATTTTTCCAGCAGAGGTTCGTCTCGTCTTCAGTGAAAAATGAGAGAATTGTAACCAAAGCAATGGCTGAAGCTAATGATAGTAAGCCTATCTCTGGGCTGTCAATTGATCTAAAAGCTCTTGCGGCAGCTGGTGCTGAAATTCTTGTTGGCACGTGGGTGCCTGCCTTGAACATTTTTGAATCCAGCTTCAGACGTGGAAAGTTCGATGAATCGCGAGTACTGCCAGATGGTTCACTTATGGAGATCACAAAAGTATATCCTCTAGATGCAGTTTTTGACAGCCCGGAGGATGTTCCTGAAGATATAAAAACAAACAAACGCTATGCAGGATCCTCAAATTGGACTGTGAAGGAAGTTGCTGAGTGCGTGAAGCAAGATTTTGGCAGCATTGACATTCTTGTGCACTCCCTTGCTAATGGACCGGAGGTAACGAAACCTCTGTTGGAAACATCTCGGAATGGTGGTGCTTCATTATCCCTCACGTACATAGCTTCTGAAAGAATCATTCCAGGGTATGGAGGTGGCATGAGTTCTGCCAAGGCTGCTTTGGAGAGTGATACACGAGTACTTGCTTTTGAAGCTGGAAGAAAGCACAAAATCAGAGTCAACACAATATCTGCGGGTCCACTAAGAAGTCGAGCTGCAAAAGCAATCGGGTTTATTGACATGATGATTGACTATTCATCGGTCAATGCACCTCTGCAGAAAGAACTATCTGCTGAGGAGGTGGGGAATACAGCTGCCTTCTTGGCATCACCTCTGGCTTCTGCTATTACTGGAGCTGTTATTTATGTAGATAATGGTTTGAATGCAATGGGCGTGGGAGTTGATAGCCCGATGTTCAAGGATCTAGATATTCCAACAGACAAGCACTAA | 1035 | 44.35 | MAAAASNIQIATLKHYQLPSRKGFKPFGTTLSGNSKAPSFAKLSSSSNISSLPFFQQRFVSSSVKNERIVTKAMAEANDSKPISGLSIDLKALAAAGAEILVGTWVPALNIFESSFRRGKFDESRVLPDGSLMEITKVYPLDAVFDSPEDVPEDIKTNKRYAGSSNWTVKEVAECVKQDFGSIDILVHSLANGPEVTKPLLETSRNGGASLSLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKHKIRVNTISAGPLRSRAAKAIGFIDMMIDYSSVNAPLQKELSAEEVGNTAAFLASPLASAITGAVIYVDNGLNAMGVGVDSPMFKDLDIPTDKH | 344 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 3068888 | 3073492 | - | Cp4.1LG05g05200.1 | Cpe05g00517 | 469722 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cpe05g00517 | 344 | Gene3D | Enoyl acyl carrier protein reductase | 273 | 330 | - | - | |
| Cpe05g00517 | 344 | Pfam | Enoyl-(Acyl carrier protein) reductase | 205 | 323 | - | - | |
| Cpe05g00517 | 344 | PANTHER | ENOYL-ACYL-CARRIER REDUCTASE | 207 | 343 | - | - | |
| Cpe05g00517 | 344 | PANTHER | ENOYL-ACYL-CARRIER REDUCTASE | 91 | 207 | - | - | |
| Cpe05g00517 | 344 | PANTHER | ENOYL-ACYL-CARRIER REDUCTASE | 1 | 91 | - | - | |
| Cpe05g00517 | 344 | Gene3D | - | 206 | 272 | - | - | |
| Cpe05g00517 | 344 | Gene3D | - | 85 | 205 | - | - | |
| Cpe05g00517 | 344 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 91 | 326 | IPR036291 | - | |
| Cpe05g00517 | 344 | PANTHER | ENOYL-[ACYL-CARRIER-PROTEIN] REDUCTASE | 207 | 343 | IPR014358 | GO:0004318|GO:0006633 | |
| Cpe05g00517 | 344 | PANTHER | ENOYL-[ACYL-CARRIER-PROTEIN] REDUCTASE | 91 | 207 | IPR014358 | GO:0004318|GO:0006633 | |
| Cpe05g00517 | 344 | PANTHER | ENOYL-[ACYL-CARRIER-PROTEIN] REDUCTASE | 1 | 91 | IPR014358 | GO:0004318|GO:0006633 | |
| Cpe05g00517 | 344 | PRINTS | Glucose/ribitol dehydrogenase family signature | 181 | 192 | IPR002347 | - | |
| Cpe05g00517 | 344 | PRINTS | Glucose/ribitol dehydrogenase family signature | 286 | 306 | IPR002347 | - | |
| Cpe05g00517 | 344 | PRINTS | Glucose/ribitol dehydrogenase family signature | 251 | 268 | IPR002347 | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Cpe05g00517 | Cpe16g00903 | CCT | |
| Cpe04g00940 | Cpe05g00517 | CCT | |
| Cpe04g00940 | Cpe05g00517 | ECH | |
| Cpe05g00517 | Cpe16g00903 | ECH |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cpe05g00517 | Cpe-Chr5:3068888 | Cpe01g01077 | Cpe-Chr1:6351289 | 1.61E-08 | dispersed | |
| Cpe16g00903 | Cpe-Chr16:8430333 | Cpe05g00517 | Cpe-Chr5:3068888 | 0 | wgd | |
| Cpe04g00940 | Cpe-Chr4:8490907 | Cpe05g00517 | Cpe-Chr5:3068888 | 1.59E-06 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cpe05g00517 | K00208 | - | csv:101210519 | 592.038 |