Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe05g00521 ATGGCTTCTTTCAAAGCTATGATTCCTTTGGCTCTTTGTGTGTGTTTCTTGGTTGGGTCCGTTACTTCTCAGCTCACCTCCACCTTCTACGACACTACTTGCCCCAATGTGTCCAGCATTGTGCAAGGCGTCGTGCAACAAGCTCTCCAAAGTGACGATCGTGCTGGTGCTAAACTCATCCGTCTTCACTTCCACGACTGCTTCGTCGATGGATGTGATGGGTCTGTTCTACTAGAGGATCAAACAGGCATAGTGAGTGAGCTCGGTGCTCCGGGAAATGGTGGCATCACAGGTTTCAATATTGTCGACGACATTAAAACCGCAGTTGAGAATGTTTGTCCTGGTGTTGTCTCCTGTGCTGATATTCTAGCGCTTGCACTTCAAGGGAAGTTCAGGGACGTGGGGCTAGACGACACAACTGACCTCGTAGCCTTGTCAGGCGCGCACACGTTCGGGCGCTCAAGGTGCAGATTCTTCGACGGACGGCTGAACACATCCAACCCAGACCCAACCCTGGACTCGACATACGCGGACCAGCTACGACAGAGCTGTCAGCCGGGGCGTGACACATTCGTGAACCTCGACCCGACAACGCCCGACACGTTCGACAACAACTACTTCACGAATCTTCAGAACAACCGTGGGCTTCTAGGAAGTGACCAAGTGTTGTTGTCCACGAGTGGGGCCCCAACTGTGAGCATTGTGAACAACTTCGCCAACAGCCCGAGCCAATTCGCGAGCGCCTTCGCTCAGTCCATGATTAACATGGGAAATCTGAGCCCGTTGACGGGGAGCAGCGGGGAAATTAGGTCCAATTGCAGAAGGCTGAACTGA 834 53.0 MASFKAMIPLALCVCFLVGSVTSQLTSTFYDTTCPNVSSIVQGVVQQALQSDDRAGAKLIRLHFHDCFVDGCDGSVLLEDQTGIVSELGAPGNGGITGFNIVDDIKTAVENVCPGVVSCADILALALQGKFRDVGLDDTTDLVALSGAHTFGRSRCRFFDGRLNTSNPDPTLDSTYADQLRQSCQPGRDTFVNLDPTTPDTFDNNYFTNLQNNRGLLGSDQVLLSTSGAPTVSIVNNFANSPSQFASAFAQSMINMGNLSPLTGSSGEIRSNCRRLN 277
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 3108291 3109499 + Cp4.1LG05g05190.1 Cpe05g00521 469726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe05g00521 277 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe05g00521 277 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe05g00521 277 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe05g00521 277 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe05g00521 277 ProSiteProfiles Plant heme peroxidase family profile. 24 277 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe05g00521 277 PANTHER PEROXIDASE 72-RELATED 127 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe05g00521 277 Gene3D - 257 277 - -
Cpe05g00521 277 PANTHER PEROXIDASE 58 127 277 - -
Cpe05g00521 277 SUPERFAMILY Heme-dependent peroxidases 24 277 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cpe05g00521 277 ProSitePatterns Peroxidases proximal heme-ligand signature. 141 151 IPR019793 -
Cpe05g00521 277 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Cpe05g00521 277 PANTHER PEROXIDASE 72-RELATED 15 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe05g00521 277 CDD secretory_peroxidase 24 275 IPR033905 GO:0004601|GO:0042744
Cpe05g00521 277 Pfam Peroxidase 128 241 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe05g00521 277 Pfam Peroxidase 42 126 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe05g00521 277 Gene3D Peroxidase, domain 2 129 256 - -
Cpe05g00521 277 PANTHER PEROXIDASE 58 15 127 - -
Cpe05g00521 277 Gene3D - 28 126 - -
Cpe05g00521 277 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe05g00521 277 PRINTS Haem peroxidase superfamily signature 195 210 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe05g00521 277 PRINTS Haem peroxidase superfamily signature 141 156 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g00521 Cpe-Chr5:3108291 Cpe13g00085 Cpe-Chr13:638162 1.07E-90 dispersed
Cpe15g00342 Cpe-Chr15:4623517 Cpe05g00521 Cpe-Chr5:3108291 2.29E-47 dispersed
Cpe05g00520 Cpe-Chr5:3087971 Cpe05g00521 Cpe-Chr5:3108291 7.96E-29 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe05g00521 K00430 - csv:101212957 395.971