Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe05g00584 ATGGCTTCCGATCCGAAGGTTCATCTGTTCGAAGAAGTGGCAAAGCACAACAAAACCAAGGATTGTTGGCTTGTAATCTCTGGAAAGGTTTATGATGTAACTCCTTTCATGGAGGATCACCCGGGCGGCGATGAAGTATTGTTGTCTGCAACGGGAAAAGATGCCTCGAACGATTTCGAGGATGTCGGGCACAGTGATTCAGCAAGAGAAATGATGGACAAATACTACATCGGAGAAATTGATCCTTCGACGGTTCCTTCGAAGAAGATTTACATTCCATCACAACAAACCCAGTACAATCAAGATAAGACGCCCGAGTTTGTGATCAAGATCTTGCAGATACTGGTTCCCATATTTATTTTGGGTTTGGCATTTGCCGTTCGACACTACACCAAGAATGAATGA 405 43.95 MASDPKVHLFEEVAKHNKTKDCWLVISGKVYDVTPFMEDHPGGDEVLLSATGKDASNDFEDVGHSDSAREMMDKYYIGEIDPSTVPSKKIYIPSQQTQYNQDKTPEFVIKILQILVPIFILGLAFAVRHYTKNE 134
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 3539455 3544216 - Cp4.1LG05g05960.1 Cpe05g00584 469789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe05g00584 134 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037
Cpe05g00584 134 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Cpe05g00584 134 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Cpe05g00584 134 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Cpe05g00584 134 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Cpe05g00584 134 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Cpe05g00584 134 PANTHER CYTOCHROME B5 1 132 - -
Cpe05g00584 134 Pfam Cytochrome b5-like Heme/Steroid binding domain 11 80 IPR001199 -
Cpe05g00584 134 PANTHER CYTOCHROME B5-LIKE 1 132 - -
Cpe05g00584 134 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 4 86 IPR036400 -
Cpe05g00584 134 SMART Cyt_b5_2 8 81 IPR001199 -
Cpe05g00584 134 Gene3D - 1 87 IPR036400 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe05g00584 Cpe13g00327 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g01589 Cpe-Chr3:12270252 Cpe05g00584 Cpe-Chr5:3539455 5.92E-65 dispersed
Cpe05g00119 Cpe-Chr5:621104 Cpe05g00584 Cpe-Chr5:3539455 6.47E-53 dispersed
Cpe05g00584 Cpe-Chr5:3539455 Cpe08g00396 Cpe-Chr8:2509521 5.76E-68 dispersed
Cpe11g00394 Cpe-Chr11:2169898 Cpe05g00584 Cpe-Chr5:3539455 3.66E-32 dispersed
Cpe12g00396 Cpe-Chr12:2850815 Cpe05g00584 Cpe-Chr5:3539455 4.66E-12 dispersed
Cpe13g00327 Cpe-Chr13:2946237 Cpe05g00584 Cpe-Chr5:3539455 3.38E-91 wgd
Cpe03g01806 Cpe-Chr3:13533592 Cpe05g00584 Cpe-Chr5:3539455 9.99E-50 wgd
Cpe05g00584 Cpe-Chr5:3539455 Cpe08g00612 Cpe-Chr8:4042170 1.39E-50 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe05g00584 K23490 - csv:101207109 262.307