Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe05g00601 AATAATTTATCCTCTGATTCTGGTGGAATCGGTTACAGCTTATTCTTCTCCCATGCAAATCCACATTCAACCATGAACAATTACAACAAGCTTCACTCCTCCGGCTCCGGCGACACGCCGGCCACCTTCCAAGTTTCTCATACTCCCAATCCACCGTCCTCCTCCGCCTCACGCCGCCGCACCCGAATTCTCTTCGTCTCCCTTATCTCGATCCTTCTCATCACCGCGTCCGCCGTCTCGGCCGCCGTCCTCATCCATACCAACACCTCCCATTTCCCCCACAACAAACCAACCCAAGCCATCTCCCACGCCTGCAGCCACACTCTCTACCCTTCTCTCTGCCGCTCTTCTCTCCTCTCCTTCCCCGGCTCTCTCTCCGCCGACGTCCACCACCTCGTTCATATCTCTCTCAACCTAACTCTCCAACATCTCACTAAAGCCCTCTATGCCTCTTCTCAAATCCCCGTTTTTCAAATCTCCAATAACCCTTTAGCGCACTCTGCTTACCAAGATTCTCACTCTGCTTACCAAGATTGTATTGAGCTTCTAAACGACGCCGTTGATGCCTTCTCTCTTTCTCTCTTCTCCACCTCAGCTTCTAACCATGACATCATGACGTGGCTTAGTGCTGCGTTGACTTATCATGACACGTGTAGTGATGGATTTGCGGATGTGGATGACCCGGTCAAGGATCAAATGGCGGCGAGGCTGAGTGATTTGTCGGAGATGATTAGTAATTCTTTGGCTATTTTTTCTGGGTATGGTCAGGGGTTGCCGGTGCAGAACAGGCGGCGGTTGATGGAGAGTGATAGCGAGTGGGCGGCGGAAAATGGTGTCGCGGTGGCGGAGGGGGAGTTTCCCGGGTGGGTTAGTGGGAAAGATAGGCGGCTTTTGGCTGCTCCCATTTCCGCCATTCAGGCGGATATTGTTGTTGCAAAGGATGGGAGTGGGAAGTTCACGACGGTGGCGGAGGCCATTGAGGCGGCGCCGTCGTCTAGTGGTCGACGAATCGTGATCTACATAAAGGCTGGAAAATACGAAGAAGAGAATTTGAAGGTGGGAAGGAAGAAGACAAACTTGATGTTTGTGGGAGATGGGAAGGGTATAACCGTCATTTCAGGTGGCAAAAGCGTTTTTGACAAAGTTACCACTTTTCGCACCGCCACCTTTGCCGGTTCTGGAACAGGAATAATTTTACGAGATATGACTTTCGAGAACACGGCGGGGCCAAGCAAGCACCAAGCAGTGGCACTTCGTGTCAGTGCAGACCATGCGGTGGTGTATCGTTGCAACATAATTGGTTACCAAGACACTCTATACGTGCACTCGAATCGACAGTTTTTTCGAGAGTGTGATATATATGGTACAGTGGACTTCATCTTTGGAAATGCGGTGGTGGTGTTCCAAAGTTGCAACATCTATGCTCGGAAACCTATGCCCCAACAAAAGAACACTATCACTGCTCAAAACCGAAAGGATCCGAATCAGAATACTGGAATCTCCATCCATGCTTGCAAGATCCTTGCTACCACTGATCTTGAAGCCTCCAAAGGTTCTTTTCCGACTTTCCTTGGTCGCCCTTGGAAATTATACTCTAGAGTTGTTTACATGGTATCTTCAATGGGGGATCACATTCATCCACGTGGTTGGCTCGAGTGGCAAGGCTCTTTCGCTCTCGACACTCTTTACTACGGCGAGTATATGAATTCTGGGCCTGGTGCTGCCACAGGGCAGCGAGTCAACTGGCCAGGTTATCGGGTCATTACTTCTACGATTGAAGCCACCAAATTTACTGTCGGGCAGTTTATCTATGGCTCTTCGTGGTTGCCTTCCACTGGAGTGTCGTTTTCGGCTGGATTATCTACTAACTAA 1872 50.11 NNLSSDSGGIGYSLFFSHANPHSTMNNYNKLHSSGSGDTPATFQVSHTPNPPSSSASRRRTRILFVSLISILLITASAVSAAVLIHTNTSHFPHNKPTQAISHACSHTLYPSLCRSSLLSFPGSLSADVHHLVHISLNLTLQHLTKALYASSQIPVFQISNNPLAHSAYQDSHSAYQDCIELLNDAVDAFSLSLFSTSASNHDIMTWLSAALTYHDTCSDGFADVDDPVKDQMAARLSDLSEMISNSLAIFSGYGQGLPVQNRRRLMESDSEWAAENGVAVAEGEFPGWVSGKDRRLLAAPISAIQADIVVAKDGSGKFTTVAEAIEAAPSSSGRRIVIYIKAGKYEEENLKVGRKKTNLMFVGDGKGITVISGGKSVFDKVTTFRTATFAGSGTGIILRDMTFENTAGPSKHQAVALRVSADHAVVYRCNIIGYQDTLYVHSNRQFFRECDIYGTVDFIFGNAVVVFQSCNIYARKPMPQQKNTITAQNRKDPNQNTGISIHACKILATTDLEASKGSFPTFLGRPWKLYSRVVYMVSSMGDHIHPRGWLEWQGSFALDTLYYGEYMNSGPGAATGQRVNWPGYRVITSTIEATKFTVGQFIYGSSWLPSTGVSFSAGLSTN 623
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 3652067 3655029 - Cp4.1LG05g06070.1 Cpe05g00601 469806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe05g00601 623 Pfam Plant invertase/pectin methylesterase inhibitor 100 250 IPR006501 GO:0004857
Cpe05g00601 623 MobiDBLite consensus disorder prediction 27 56 - -
Cpe05g00601 623 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 99 252 IPR035513 -
Cpe05g00601 623 TIGRFAM PME_inhib: pectinesterase inhibitor domain 81 252 IPR006501 GO:0004857
Cpe05g00601 623 ProSitePatterns Pectinesterase signature 2. 453 462 IPR033131 -
Cpe05g00601 623 Gene3D - 302 620 IPR012334 -
Cpe05g00601 623 Gene3D Invertase/pectin methylesterase inhibitor family protein 98 253 IPR035513 -
Cpe05g00601 623 PANTHER PECTINESTERASE 59 620 - -
Cpe05g00601 623 SUPERFAMILY Pectin lyase-like 303 619 IPR011050 -
Cpe05g00601 623 SMART PMEI_2 96 250 IPR006501 GO:0004857
Cpe05g00601 623 Pfam Pectinesterase 308 605 IPR000070 GO:0030599|GO:0042545
Cpe05g00601 623 CDD PMEI-like_3 104 254 - -
Cpe05g00601 623 PANTHER PECTINESTERASE 59 620 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe05g00601 Cpe14g00042 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g00601 Cpe-Chr5:3652067 Cpe15g00626 Cpe-Chr15:6985574 2.49E-83 dispersed
Cpe12g00918 Cpe-Chr12:7922749 Cpe05g00601 Cpe-Chr5:3652067 2.16E-52 dispersed
Cpe19g00532 Cpe-Chr19:4521880 Cpe05g00601 Cpe-Chr5:3652067 1.22E-07 dispersed
Cpe19g00974 Cpe-Chr19:6861170 Cpe05g00601 Cpe-Chr5:3652067 2.45E-08 dispersed
Cpe08g00474 Cpe-Chr8:3039595 Cpe05g00601 Cpe-Chr5:3652067 5.50E-124 transposed
Cpe08g01334 Cpe-Chr8:9621008 Cpe05g00601 Cpe-Chr5:3652067 8.11E-105 transposed
Cpe13g00358 Cpe-Chr13:3683843 Cpe05g00601 Cpe-Chr5:3652067 6.88E-07 transposed
Cpe16g00079 Cpe-Chr16:1588437 Cpe05g00601 Cpe-Chr5:3652067 1.59E-89 transposed
Cpe20g00567 Cpe-Chr20:3376560 Cpe05g00601 Cpe-Chr5:3652067 2.28E-35 transposed
Cpe13g00315 Cpe-Chr13:2699643 Cpe05g00601 Cpe-Chr5:3652067 1.18E-16 wgd
Cpe14g00042 Cpe-Chr14:223595 Cpe05g00601 Cpe-Chr5:3652067 0 wgd
Cpe05g00601 Cpe-Chr5:3652067 Cpe09g00027 Cpe-Chr9:149269 1.84E-39 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe05g00601 - - csv:101216816 957.207