Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe05g00647 ATGCCTCCATGGTGGGGGAAGTCATCATCAAAAGAAGCAAAGAAGAGCAAGGAAAGTTTTATCAATGCATTGCAGAGAAAACTTAGAACAGCTGATGGTAAAACAAACAGCAGATCAGGAGGATCTCCAAGAACTTGTAATGATAATGATACAATTTCTGAGCAAGGAACTCGATCTCCTATTCTTTTGAGAACAATTTCACCTTCAAAACAAGTATCAAGATGTCAAAGCTTTTCTTCTGAAAGGCCACAAGCTCAACCTCTACCTCTTCCTGGTGTGCAGCCGCCAATTGTAGGTCGTACTGACTCTGGGATTAGTATTTCGCCAAAACCGAGTTCTGAAAGAAGCTCCAAGCCATCGTCATATCTACCACTCCCAAGACCAGCATGCATACCCAGGAGGCCTAACCATGCTGATTTAGATGCAGAGCTTGGTGTTGGTTCAGTGTCCAGTGAGAGCTCGAATGATAGCGCGGATCTACTAGATTCACGCCATCGTAGTCCTCAGGCAACTGACTATGATCTCGGGTCTAAAACGGCTGCAGGCAGTCCTTCGAGTGCCATTGTCAAGGATCAGTCTTCTATTGTCCCTCCACCAAGTTCACGAGAGCCCAGAAAACCAGCAAATATCTCCTTGAGCAACCACATTTTCTCCACATCACCCAAAAGGAGACCTTTAAGCAGTCATGTTCCAAATCTGCAAGTCCCATATAATGGGAATTTTTGTATTGCTCCAGACAGTTCAATGTCAAGTCCTTCAAGAAGTCCCATAAGGGCTTTTAGCACAGAGCAAGTTATTAACAATGCTGTTAGTGCTGGAAAGTTCTATATGGATCTCACTTTTCCTGGGTCAGGCCATTGTTCTAGTCCTGGTTCTGGTTACAATTCAGGGCATAACTCAATGGGTGGTGATTTATCAGGACAGCTATTTTTGCAACAAAGCCGAGGTAGCCCAGAGTATTCACCAGCTCCCAGTCCCAGAATGACTAGCCCTGGTCCTAGCTCCCGAGTCCATAGTGGTGCAGTGACACCAATTCATCCTAGAGCAGGAGGGATACCAACCGAGTCACAGACATGGCCTGACGAGAAGCAAACACACCGCTTACCTCTACCTCCGGTCGCAATTTCCAATGCTCCTTTTTCTCATTCCAATTCAGCTGCAACATCTCCCTCTGTTCCAAGAAGTCCTGGAAGAGCTGATAATCCAGCAAGCCCAGGCTCCCGTTGGAAAAAGGGGAAGCTTTTGGGTAGGGGTACCTTTGGTCATGTGTATGTTGGTTTCAACAGTGAAAGTGGTGAAATGTGTGCAATGAAGGAGGTTACATTATTTTCAGATGATGCAAAGTCCAAGGAGAGTGGCAAGCAATTAATGCAAGAAATCACCTTGTTGAGTCGTTTACGACATCCAAACATTGTGCAGTATTATGGATCTGAAACGGTTGGGGACAGGCTTTACATTTACCTTGAATATGTATCTGGTGGCTCTATTTACAAGCTTCTCCAGGAATATGGACAGCTTGGAGAAGTTGCACTTCGTAGTTATACCCAGCAAATACTGTCCGGGCTTGCGTATTTACATGCTAAGAGTACTGTTCACAGGGATATCAAAGGAGCAAATATACTCGTTGATCCCACGGGGCGTGTTAAGTTGGCTGACTTTGGGATGGCAAAACATATAACTGGGCAATCGTGCCCTTTGTCGCTTAAAGGCAGCCCATACTGGATGGCGCCGGAGGTTATAAAGAATTCAAATGGTTGTAATCTTGCTGTGGATATTTGGAGTCTTGGATGCACTGTTTTGGAGATGGCTACAACGAAGCCTCCTTGGAGTCAATATGAGGGAGTAGCTGCAATGTTTAAGATTGGCAATGGCAAAGAACTTCCCGAAATCCCAGATCATCTTTCGCACGATGGAAAAGATTTCGTTAGACAATGTCTGCAACGTAATCCAGCTCATCGTCCTACAGCTGCTCAACTTTTGGAACATCCTTTTGTAAAACATGCTTCACCTCTTGAAAGACCGATTTCGGGTTCTGAGCATTCAGGAAGGAATCCCAGCTTCTTGGATTCTGATAGATCTGCAGCTCCTTCATCTAGACTCTCCACAGCTGTGTTTCATTCCAGTGAAATTCATATTCCGAGGAACCTTTCATGTCCTGTTTCCCCCATTGGAAGCCCTCTGGTGCACTCTCGATCGCCACAGCACCCGAGTGGGAGAATGTCTCCGTCGCCCATCTCTAGCCCTCGGAACATGTCAGGTGCATCGACTCCGCTCACGGGAGGAAGCGGTGCTATTCCACACCAGCATCTCAAACAATCACCGTACCTACAGGAGGGTTTTGGGAGCTTGCCGAAGCCTTCAATAGGTCCCTATAGTAATGGCCCTTCATATCAGGATTCGAACCCCGACATCTTTCAGGGGATGGGGATTCAACCAGGTTCTCACATCTTCTCCGAGCAATTTGGAAAGCCTGCTTGGGAATTATACGACGGGCAGGCAGTCTTGGCCGATCGTGTTTCTAGGCAGCTCCTGAGTGATCACATAACAACTCCCTCCCTGGATCTAAATCCGAACTCTCTTTCGACCAACCGCAGATAG 2598 46.54 MPPWWGKSSSKEAKKSKESFINALQRKLRTADGKTNSRSGGSPRTCNDNDTISEQGTRSPILLRTISPSKQVSRCQSFSSERPQAQPLPLPGVQPPIVGRTDSGISISPKPSSERSSKPSSYLPLPRPACIPRRPNHADLDAELGVGSVSSESSNDSADLLDSRHRSPQATDYDLGSKTAAGSPSSAIVKDQSSIVPPPSSREPRKPANISLSNHIFSTSPKRRPLSSHVPNLQVPYNGNFCIAPDSSMSSPSRSPIRAFSTEQVINNAVSAGKFYMDLTFPGSGHCSSPGSGYNSGHNSMGGDLSGQLFLQQSRGSPEYSPAPSPRMTSPGPSSRVHSGAVTPIHPRAGGIPTESQTWPDEKQTHRLPLPPVAISNAPFSHSNSAATSPSVPRSPGRADNPASPGSRWKKGKLLGRGTFGHVYVGFNSESGEMCAMKEVTLFSDDAKSKESGKQLMQEITLLSRLRHPNIVQYYGSETVGDRLYIYLEYVSGGSIYKLLQEYGQLGEVALRSYTQQILSGLAYLHAKSTVHRDIKGANILVDPTGRVKLADFGMAKHITGQSCPLSLKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNGKELPEIPDHLSHDGKDFVRQCLQRNPAHRPTAAQLLEHPFVKHASPLERPISGSEHSGRNPSFLDSDRSAAPSSRLSTAVFHSSEIHIPRNLSCPVSPIGSPLVHSRSPQHPSGRMSPSPISSPRNMSGASTPLTGGSGAIPHQHLKQSPYLQEGFGSLPKPSIGPYSNGPSYQDSNPDIFQGMGIQPGSHIFSEQFGKPAWELYDGQAVLADRVSRQLLSDHITTPSLDLNPNSLSTNRR 865
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 3949716 3956149 - Cp4.1LG05g06590.1 Cpe05g00647 469852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe05g00647 865 MobiDBLite consensus disorder prediction 34 84 - -
Cpe05g00647 865 MobiDBLite consensus disorder prediction 286 412 - -
Cpe05g00647 865 Gene3D Transferase(Phosphotransferase) domain 1 407 690 - -
Cpe05g00647 865 MobiDBLite consensus disorder prediction 789 805 - -
Cpe05g00647 865 MobiDBLite consensus disorder prediction 669 694 - -
Cpe05g00647 865 Pfam Protein kinase domain 410 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe05g00647 865 MobiDBLite consensus disorder prediction 377 395 - -
Cpe05g00647 865 MobiDBLite consensus disorder prediction 286 320 - -
Cpe05g00647 865 MobiDBLite consensus disorder prediction 24 208 - -
Cpe05g00647 865 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 794 - -
Cpe05g00647 865 MobiDBLite consensus disorder prediction 105 120 - -
Cpe05g00647 865 MobiDBLite consensus disorder prediction 723 805 - -
Cpe05g00647 865 ProSitePatterns Protein kinases ATP-binding region signature. 415 438 IPR017441 GO:0005524
Cpe05g00647 865 ProSiteProfiles Protein kinase domain profile. 409 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe05g00647 865 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 1 794 - -
Cpe05g00647 865 SUPERFAMILY Protein kinase-like (PK-like) 407 749 IPR011009 -
Cpe05g00647 865 MobiDBLite consensus disorder prediction 727 762 - -
Cpe05g00647 865 CDD STKc_MEKK1_plant 408 665 - -
Cpe05g00647 865 MobiDBLite consensus disorder prediction 172 199 - -
Cpe05g00647 865 MobiDBLite consensus disorder prediction 679 694 - -
Cpe05g00647 865 SMART serkin_6 409 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g02021 Cpe-Chr1:17213329 Cpe05g00647 Cpe-Chr5:3949716 4.65E-83 dispersed
Cpe01g02029 Cpe-Chr1:17271978 Cpe05g00647 Cpe-Chr5:3949716 2.94E-22 dispersed
Cpe05g00647 Cpe-Chr5:3949716 Cpe10g00335 Cpe-Chr10:1945120 3.71E-138 dispersed
Cpe13g00598 Cpe-Chr13:5856466 Cpe05g00647 Cpe-Chr5:3949716 2.73E-21 dispersed
Cpe14g00100 Cpe-Chr14:541122 Cpe05g00647 Cpe-Chr5:3949716 0 wgd
Cpe05g00647 Cpe-Chr5:3949716 Cpe09g00079 Cpe-Chr9:464681 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62408 PF00069 Pkinase 5.00E-71 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe05g00647 K20717 - csv:101222716 1529.23