Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cpe05g00656 | ATGATGCCGGCGGTGAAAGCTTTTCCGTTCACCGTGATCAGTCACGGGCTCGCGGTGGTGACGCTCATCATGGTGCTCATTTGGACCATTCACTTCAGAGGCGGCCTTGCTTGGGAGTCTGTCAACAAGAGTCTCATCTTCAATGTTCATCCTGTTTTTATGCTATTCGGATTGATCATCATAGGAGGCGAAGCAATAATCAGTTACAAATCACTGCCGTTCAGAAAAGAAGTAAAGAAGGTGATCCATCTGGCACTAAACGGCGTCGCATTGGTTCTAGGCATTGTGGGAATCATCGCTGCATTCAAGAACCATAACGAGAGTGGGATCGCTAATCTCTACAGCCTACATTCCTGGATTGGAATTGGCGTAATTGTCCTCTACGGTATCCAGTGGTTGTACGGATTCGTGGCATTTTTCTACCCCGGAGGGTCCGCTGATCTTCGAAGAGCGACGCTGCCATGGCACGCGCTGTTGGGCGCGTGTGTGTACGTATTGGCCGCCGCCAACTCGGCGCTTGGCTTCCTTGAGAAGCTGACGTTTCTGCAGAGCTCCGGCGTCGCCAAATACGGCACTGAGGCGTTGCTCGTCAACTTCACCGCTATCACCACCGTCGTTTTTGCTGTGTTTGTGATTTTGTCTGTCATTTCACAGCCCTCCTCCGACGAACACCACGACGATTATAGAATCCATTCCGCTAAATGA | 705 | 50.92 | MMPAVKAFPFTVISHGLAVVTLIMVLIWTIHFRGGLAWESVNKSLIFNVHPVFMLFGLIIIGGEAIISYKSLPFRKEVKKVIHLALNGVALVLGIVGIIAAFKNHNESGIANLYSLHSWIGIGVIVLYGIQWLYGFVAFFYPGGSADLRRATLPWHALLGACVYVLAAANSALGFLEKLTFLQSSGVAKYGTEALLVNFTAITTVVFAVFVILSVISQPSSDEHHDDYRIHSAK | 234 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 3995270 | 3998167 | + | Cp4.1LG05g06420.1 | Cpe05g00656 | 469861 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cpe05g00656 | 234 | SMART | 561_7 | 49 | 175 | IPR006593 | - | |
| Cpe05g00656 | 234 | CDD | Cyt_b561_ACYB-1_like | 40 | 183 | - | - | |
| Cpe05g00656 | 234 | PANTHER | TRANSMEMBRANE ASCORBATE FERRIREDUCTASE 1 | 3 | 228 | - | - | |
| Cpe05g00656 | 234 | PANTHER | CYTOCHROME B561-RELATED | 3 | 228 | IPR043205 | GO:0016491 | |
| Cpe05g00656 | 234 | Gene3D | - | 1 | 225 | - | - | |
| Cpe05g00656 | 234 | ProSiteProfiles | Cytochrome b561 domain profile. | 13 | 216 | IPR006593 | - | |
| Cpe05g00656 | 234 | Pfam | Eukaryotic cytochrome b561 | 49 | 181 | IPR006593 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cpe01g00032 | Cpe-Chr1:225531 | Cpe05g00656 | Cpe-Chr5:3995270 | 5.71E-46 | dispersed | |
| Cpe05g00656 | Cpe-Chr5:3995270 | Cpe09g00268 | Cpe-Chr9:1559055 | 5.69E-37 | dispersed | |
| Cpe15g00317 | Cpe-Chr15:4141089 | Cpe05g00656 | Cpe-Chr5:3995270 | 2.68E-123 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cpe05g00656 | K08360 | - | csv:101209308 | 356.681 |