Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe05g00691 | ATGTCTTCCACCGCCCTTCTCTCTCTCCCCTTCACTCTCAGGCCCTCTCGCTTCCCCAATTCCTCTCTCTCGCCGCTCCGCCGTGCCACCTCTGTCGCGCCATTTCCAACAGTTGCGGCGGTTCGCTGCGGGTTTAAGCCTGCTTCCAAGAGTAGCAGAGGCAGTTCTACTTCTTTCGCCTATGTCGGGCCTGCTTCGGACCCGAATGTCAGCGAGTCCGACCCGAAACTCGATGACGCCTCCGATTCCCAGGTTCGGGCTCCTGGGGTCTTGTATTGGGGGCTCTTGTGGAAGCTTTTGATTAAGCACAAGCTACGGCTTCTGGTTTCTTCGCTTACTCTTGTTTGCTGCACCACTTGCACTCTTTCCATGCCGTTTTTCTCAGGTAGATTTTTTGAGGTACTTATAGGTGCAAAACCTGGGTCTTTGTGGAGGCTGCTGAGTACAGTTGGAATTTTATATGCATTGGAGCCAATATTGACGGTCTTGTTCGTCACAAACATGAATTTCATGTGGGAGAAGGTTATGTCAAGATTAAGAGCCCAGATTTTTGGAAGGTTGCTGATTCAGAAGGTGGAATTTTTTGACAGATACAAGGTTGGTGAAATTACCGGATTGTTAACTTCTGATTTGGGCTCTCTTAAAGATGTGGTGAGTGAGAATGTTTCAAGGGACCGTGGATTCAGAGCGTTCTCTGAGGCAAGCAACTCTTCACCAAGTACAAGTGATTGGAACAATATGTATATTATTTGCATTGTCCCCCCAGCTTGCACCTATTCTTGGTCTTCTGATGTTGAGTGTATCTTTTTCACTGTATACAAGCGTTCTACTATCCCTGTATTTAAAGCTCATGGATTAGCTCAAGCCTCCATGGCTGATTGTGCAACAGAGACATTCTCTGCTATTCGCACTGTGAGATCCTTTGGTGGTGAAAAGCGTCAAATGTTCAATTTTGGTCGCCAGGTTATTGCATATGAGGGTAGTGGCATATCACTTGGGACTTTTAAGTCTCTGAATGAATCCTTAACTAGAGTTGCTGTTTATATTTCGCTTATGTCATTATATTGGCTTGGAGGAGACAAAGTGAAAGCGGGTGAACTTTCTGTAGGAACCATGGCTTCTTTTATTGGATATACTTTCACGTTAACATTTGCTGTTCAAGGATTGGTAAATACATTTGGAGATCTCCGTCGAACTTTTGCTGCTGTTGAAAGAATTAATACTGTTTTACATGAAGAGGTTGATGAAGCCCTTGCATATGGATTAGAAAAAGAGATGCAACAAAAAGAATTTAAATATAAGTTGTTATTCTCTGGCGATACTGATGAAAATAGTCAGGTGAAAACACAGTACATGTCCGACCTAAAATCTTCTAGCAATGTTATCAATCTTGCTTGGTCTGGTGATATTTGTCTTGAAGATGTGGGCTTTTCGTATCCTTTGAGACCTGACGTTGACATTCTTAGTGATTTGAATTTAACACTTAAATGTGGAACCGTGACGGCACTAGTGGGCCCTAGTGGAGCAGGAAAGAGTACAATAGTACAGCTGTTGGCACGTTTTTATGAGCCAAAGCAAGGGCAAATAAAAGTTTCTGGTGAAGATATTCGTGCATTTGATAAGAGGGAATGGGCTCGGGCTGTTTCAATAGTGAATCAAGAACCTGTTCTGTTTTCGGTGTCTGTTGGAGAAAATATTGCATATGGACTTCCAGATGATAATGTAACAAAGGATGAGGTGATAAAGGCAGCCAGAGCTGCAAATGCTCATGACTTCATTATTGCACTTCCTCAGGGCTATGACACGCCAGTCGGTGAACGTGGAGGCCTTCTAAGTGGTGGCCAGCGACAGAGAATAGCCATTGCAAGAGCTTTGCTTAAGAATGCTCCAATCCTTATACTTGATGAGGCAACCAGTGCACTGGATGCGGTTAGCGAGCGACTCGTCCAGGATGCTCTAAACCTCTTAATGAAGGGAAGGACGACATTGGTGATTGCACATCGGTTGAGTACAGTTCAAAATGCTCATCAAATTGCATTTTGTTCTGATGGAAAAATTGTAGAGCTGGGTACTCATTTGGAACTATTGGCTCAGAAAGGTCAGTATGCTTCATTAGTTGGCACACAAAGGCTGGCATTTGAGTGA | 2145 | 43.96 | MSSTALLSLPFTLRPSRFPNSSLSPLRRATSVAPFPTVAAVRCGFKPASKSSRGSSTSFAYVGPASDPNVSESDPKLDDASDSQVRAPGVLYWGLLWKLLIKHKLRLLVSSLTLVCCTTCTLSMPFFSGRFFEVLIGAKPGSLWRLLSTVGILYALEPILTVLFVTNMNFMWEKVMSRLRAQIFGRLLIQKVEFFDRYKVGEITGLLTSDLGSLKDVVSENVSRDRGFRAFSEASNSSPSTSDWNNMYIICIVPPACTYSWSSDVECIFFTVYKRSTIPVFKAHGLAQASMADCATETFSAIRTVRSFGGEKRQMFNFGRQVIAYEGSGISLGTFKSLNESLTRVAVYISLMSLYWLGGDKVKAGELSVGTMASFIGYTFTLTFAVQGLVNTFGDLRRTFAAVERINTVLHEEVDEALAYGLEKEMQQKEFKYKLLFSGDTDENSQVKTQYMSDLKSSSNVINLAWSGDICLEDVGFSYPLRPDVDILSDLNLTLKCGTVTALVGPSGAGKSTIVQLLARFYEPKQGQIKVSGEDIRAFDKREWARAVSIVNQEPVLFSVSVGENIAYGLPDDNVTKDEVIKAARAANAHDFIIALPQGYDTPVGERGGLLSGGQRQRIAIARALLKNAPILILDEATSALDAVSERLVQDALNLLMKGRTTLVIAHRLSTVQNAHQIAFCSDGKIVELGTHLELLAQKGQYASLVGTQRLAFE | 714 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 4236234 | 4243440 | - | Cp4.1LG05g07030.1 | Cpe05g00691 | 469896 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe05g00691 | 714 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 461 | 709 | IPR027417 | - | |
Cpe05g00691 | 714 | Pfam | ABC transporter transmembrane region | 109 | 222 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Cpe05g00691 | 714 | Pfam | ABC transporter transmembrane region | 268 | 385 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Cpe05g00691 | 714 | PANTHER | ABC TRANSPORTER B FAMILY MEMBER 28 | 51 | 712 | - | - | |
Cpe05g00691 | 714 | Gene3D | ABC transporter type 1, transmembrane domain | 247 | 416 | IPR036640 | GO:0005524|GO:0016021 | |
Cpe05g00691 | 714 | Gene3D | ABC transporter type 1, transmembrane domain | 81 | 224 | IPR036640 | GO:0005524|GO:0016021 | |
Cpe05g00691 | 714 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 108 | 398 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Cpe05g00691 | 714 | Gene3D | ABC transporter type 1, transmembrane domain | 457 | 467 | IPR036640 | GO:0005524|GO:0016021 | |
Cpe05g00691 | 714 | Gene3D | - | 468 | 711 | IPR027417 | - | |
Cpe05g00691 | 714 | Pfam | ABC transporter | 488 | 639 | IPR003439 | GO:0005524 | |
Cpe05g00691 | 714 | SUPERFAMILY | ABC transporter transmembrane region | 96 | 415 | IPR036640 | GO:0005524|GO:0016021 | |
Cpe05g00691 | 714 | PANTHER | ATP-BINDING CASSETTE SUB-FAMILY B | 51 | 712 | IPR039421 | - | |
Cpe05g00691 | 714 | CDD | ABC_MTABC3_MDL1_MDL2 | 470 | 709 | - | - | |
Cpe05g00691 | 714 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 470 | 708 | IPR003439 | GO:0005524 | |
Cpe05g00691 | 714 | CDD | ABC_6TM_TAP_ABCB8_10_like | 112 | 406 | - | - | |
Cpe05g00691 | 714 | SMART | AAA_5 | 497 | 691 | IPR003593 | - | |
Cpe05g00691 | 714 | ProSitePatterns | ABC transporters family signature. | 611 | 625 | IPR017871 | GO:0005524 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe05g00691 | Cpe-Chr5:4236234 | Cpe15g00199 | Cpe-Chr15:1651350 | 1.27E-76 | dispersed | |
Cpe08g00693 | Cpe-Chr8:5343244 | Cpe05g00691 | Cpe-Chr5:4236234 | 1.42E-11 | dispersed | |
Cpe19g00232 | Cpe-Chr19:1927509 | Cpe05g00691 | Cpe-Chr5:4236234 | 1.69E-06 | dispersed | |
Cpe05g00691 | Cpe-Chr5:4236234 | Cpe20g00083 | Cpe-Chr20:433845 | 7.95E-78 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe05g00691 | K05657 | - | csv:101211598 | 1125.92 |