Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe05g00706 ATGTCCGAACCACCTCCCTCCGTCTTCGATCATGATCCCTCCCCCTCCGCCGCCAAGCTTCGTAAGATCCCTCCCATCCCTATTCGCCGCGATACCAAACCCAATGCCGGAGACTCTGATCCCGATCAAGAACATGACCACGCCGAGGATCATCCTCCTCAACCTGGCGATTCCTCCATCATAATGGCCTCCTCCCTCGGGTTGAACCACATTCGGACGCGGTCTGCTCCTCTTCCGCTTCGGACCTGTGCCGTTGGCACGCCCTCCAATTTGGGCGATGATTCCAGGAATAATGTCGCCGACGGGAGTGAGTCGGAGCCAAAAAATTCCTCCACTGAACAGGGTATGTGTAATGTAGAACGTATTATAATGTATGTGTATTTTGTTTTGTTTATCTTTGTGCTCTGTTTTGGTGCTTGGTTTCGCAAGCGGACAAACATTCCGTGGAGTCAACCGAACTCTTTAAGATATCCGTCGGCTCTGAATCATGATATCGAGGGTCATCATGCAACATATACAAAGGAAATTCAGTCTCCACGATTCCGTGCAATACTGCGTGTTACTAGTGGAAGAAAGAAGAGAACCCCTGATATCAAAAGCTTCTCTCACGAGCTCAATTCCAAAGGAGTTCGCCCTTTTCCAGTTTGGAAGCCTCGGGCATTTGGACATTTGGAAGAGATCATGGTTGCTATCAGAGCAAAATTTGACAGGTTAAAGGATGATGTTAACTACGAACTGGGCATTTTTGCTGGAGATCTCGTAGATATACTTGAAAAGGCAGATGGATCTATGCCTGAACTTAAGGAGGGTTTGGAGGATTTGTTGGTGGTTGCTCGGAAATGTGCGACAATGTCACCTACTGAATTCTGGACAAAAGGTGAAGGCATTGTCCAGAATCTAGATGACCGGCGCCAGGAGCTGTCATTAGGAATTCTTAAGCAAGCCCACACCCGCCTTCTTTTCATCCTGACACGATGTACGCGGCTTATTCAGTTCAGAAAGGAGAGTGGTTATGAAGATGAGCACATTTTGGGTCTTCATCAGCTTAGTGATCTAGGAATTTATCCAGAGAAAATCAGGCAACTCGAACAACTTGAGTTTGGTGATCCATTGACTGGGAAAGAAGATATTGCGAAGCAGCTGAAGTTAGTTGGGAAGGATCAAGCCCATCGCATTGTGAAGCAAGATTCAGAACAAACTTTTAGTAATAGTGCTGGAAATGTTAGTCTGGACTCTGCCGTAAGTTTTGATTCATCTACAAGCATGTATAGGATGGCATCCTGGAAAAAGCTACCATCAGCAGCTGAGAAGAACCGGAAAGACCCTGTCGATACAACACATGCCAAGGATAAAATTGAGGTGTTGCATGTACATGAAGCTAAAACTGGGAGCAATGAGAAATTAGATATCCCATCTAGTCATATTGAGCATTCAGAAGCACCCCCTAAAGAACAAAAAGTATCTTGGGGAATATGGGGTTATCATCAAAATGCCAATTTTGAGAGTTTGATGATCTGTCGGATTTGTGAGGTTGAAATTCCGACTATTCATGTTGAGGTGCATTCTCGAATTTGTACAATTGCCGATAGGTGTGATTTGAAAGGTTTAACTGTGAATGAGCGCCTTGAGCGGGTTGCTAGAGCTCTTGAAAAGATACTGGAGTCTTGGACGCCTAAAAGTACACCAAGAAGTAGCGATACTTCCTGTGCAAATTTTGATACTGTTAAGGTTTCTACATCAAATATGCAAGAAGAGATTTTTGAGTTGTCATCTAAAGGAATCAGTTTGTCATGTCGAAACTCTGAAGAGCTGCTTGATTCCCTCCCTGTTACTGGAAACTCTTCCTTTGTGGAAAGTCAGGATATTTTTCAGGATCAATCATACAATCGACCATTTATTTTCACACCAGAACACAGTACAAAATCAATGTCAGCTGGAACTCTAACACCAAGATCACCTCTTTTAACACCCAGGTCCAGTCAGATTGAATTGCTGTTGCATGGGCGAAGAGCAATATCTGAACTTGAAAATTATCAGCAGATATACAAATTGTTGGATATTGTTCGTTCCATTGCAAACGTTAACAACTCTGGCTATGGTGCATTGGAGTGTATGCTCGATCGATTAGAAGACCTTAAATATGCAATCCAGGATAGGAAGGTCGATGCCCTTGTTGTGGAGACTTTTGGAAGGCGCATAGAGAAGCTCTTGCAGGAAAAATATGTACAACTTTGTGGGCAAATAGAAGATGATAAAGTAGACTCTTCAATTGGCATAGTTGATGAAGAGAGTTCAGTGGAAGATGATACTGTTCGTAGTCTGCGTGCAAGTCCGGTTAACCCATGTTCAAAAGATCGAACATCTATTGAAGATTTTGAAATAATCAAACCAATTAGTAGAGGAGCCTATGGCCGAGTTTTCCTTGCCAGAAAACGAGCAACTGGAGACTTATTTGCAATAAAGGTTTTAAAGAAGGCTGATATGATTCGCAAGAATGCAGTAGAAAGTATTTTGGCTGAACGCAATATCCTTATCTCAGTTCGCAACCCTTTTGTGGTCCGCTTTTTCTACTCTTTCACATGTAGGGAAAATCTGTATCTGGTCATGGAATACTTAAATGGTGGTGATATTTACTCCTTACTGAGAAACCTAGGGTGCTTAGATGAAGATATGGCTCGGGTTTATATCGCTGAAATTGTTCTTGCTTTGGAGTATTTGCACTCCTTAAATGTGATTCACAGAGACTTAAAGCCAGATAACTTATTGATTGGTCAAGATGGTCACATTAAGATTGTTAGGATTCTAATAACATTTCCTGAAACCTTGAAGGAAGCGTCTAACTTGGAGAAGATTAAGTTGACAGATTTTGGGCTCTCCAAAATTGGTCTTATCAATAGTACAGATGATTTCTCAGGTCCATCAATCAATGGAACTGTTCCACTTGGAGACAATGGACCTATATCTCAATCTCTGTCAAAAAGAGAACACCGACAAAAGCATTCAGTTGTTGGTACTCCAGATTATTTGGCCCCTGAGATACTTCTGGGCATGGGACATGGTGTAACTGCGGATTGGTGGTCTGTTGGAGTAATTCTTTTTGAGATGCTTGTAGGACTACCGCCGTTCAATGCAGAAAGTCCACAGGTTGAACCTGCAACTGGTAATTTTCCCACCTCCTATCTTGATCTCCCTCTTGGCTATAATCCCAAGCGGGCCTCATTTTGGAACTCCTTGACCAAGGTAATTCCAATTCATTTAACCTTGCTACGCCACCCTTTGTTGGATAGAGTTATTATTCCATTGCAGCTAATTTTTGATAATATCATTAATAGAGACATACCATGGCCCAAGGTACCGGACGAGATGAGTTATGAAGCCCAGGATTTGATTGACAAATTGCTGACTGAAAATTCAGTTCAAAGACTGGGAGCTACAGGAGCCAGAGAGGTGAAGCAACATCCTTTCTTCAAGGATATTAATTGGGAAACTCTTGCAAGGCAGAAGGCCATGTTTATACCATCAGCAGAGCCACATGATACAAGTTATTTCATGAGTCGGTATATATGGAATCCAGAAGACGAGGACTTTAATGGTGCTAGTGACTTTGATGATCATGATTTGACAGATACCAGCAGTAGTTCATTTAGCAACCTACAAGATGAAGATGGAGACGAATGTGGTAGTTTGGCTGACTTCTGTACACCAGCCCTTTCTGTGAAGTACTCGTTCAGCAATTTCTCTTTCAAGAATTTATCACAGTTGGCTTCCATCAATTATGATTTGGTGGTGAAGAGCAGCCAAAACTCACCAGATATAACCAGACCATCCTTTCCTTGA 3837 42.53 MSEPPPSVFDHDPSPSAAKLRKIPPIPIRRDTKPNAGDSDPDQEHDHAEDHPPQPGDSSIIMASSLGLNHIRTRSAPLPLRTCAVGTPSNLGDDSRNNVADGSESEPKNSSTEQGMCNVERIIMYVYFVLFIFVLCFGAWFRKRTNIPWSQPNSLRYPSALNHDIEGHHATYTKEIQSPRFRAILRVTSGRKKRTPDIKSFSHELNSKGVRPFPVWKPRAFGHLEEIMVAIRAKFDRLKDDVNYELGIFAGDLVDILEKADGSMPELKEGLEDLLVVARKCATMSPTEFWTKGEGIVQNLDDRRQELSLGILKQAHTRLLFILTRCTRLIQFRKESGYEDEHILGLHQLSDLGIYPEKIRQLEQLEFGDPLTGKEDIAKQLKLVGKDQAHRIVKQDSEQTFSNSAGNVSLDSAVSFDSSTSMYRMASWKKLPSAAEKNRKDPVDTTHAKDKIEVLHVHEAKTGSNEKLDIPSSHIEHSEAPPKEQKVSWGIWGYHQNANFESLMICRICEVEIPTIHVEVHSRICTIADRCDLKGLTVNERLERVARALEKILESWTPKSTPRSSDTSCANFDTVKVSTSNMQEEIFELSSKGISLSCRNSEELLDSLPVTGNSSFVESQDIFQDQSYNRPFIFTPEHSTKSMSAGTLTPRSPLLTPRSSQIELLLHGRRAISELENYQQIYKLLDIVRSIANVNNSGYGALECMLDRLEDLKYAIQDRKVDALVVETFGRRIEKLLQEKYVQLCGQIEDDKVDSSIGIVDEESSVEDDTVRSLRASPVNPCSKDRTSIEDFEIIKPISRGAYGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDIYSLLRNLGCLDEDMARVYIAEIVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKIVRILITFPETLKEASNLEKIKLTDFGLSKIGLINSTDDFSGPSINGTVPLGDNGPISQSLSKREHRQKHSVVGTPDYLAPEILLGMGHGVTADWWSVGVILFEMLVGLPPFNAESPQVEPATGNFPTSYLDLPLGYNPKRASFWNSLTKVIPIHLTLLRHPLLDRVIIPLQLIFDNIINRDIPWPKVPDEMSYEAQDLIDKLLTENSVQRLGATGAREVKQHPFFKDINWETLARQKAMFIPSAEPHDTSYFMSRYIWNPEDEDFNGASDFDDHDLTDTSSSSFSNLQDEDGDECGSLADFCTPALSVKYSFSNFSFKNLSQLASINYDLVVKSSQNSPDITRPSFP 1278
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 4326768 4338931 - Cp4.1LG05g07190.1 Cpe05g00706 469911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe05g00706 1278 CDD STKc_MAST_like 798 1161 - -
Cpe05g00706 1278 SMART serkin_6 792 1156 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe05g00706 1278 PANTHER SERINE/THREONINE PROTEIN KINASE IRE-RELATED 15 931 - -
Cpe05g00706 1278 SUPERFAMILY Protein kinase-like (PK-like) 789 1188 IPR011009 -
Cpe05g00706 1278 MobiDBLite consensus disorder prediction 88 114 - -
Cpe05g00706 1278 ProSitePatterns Serine/Threonine protein kinases active-site signature. 911 923 IPR008271 GO:0004672|GO:0006468
Cpe05g00706 1278 Gene3D Transferase(Phosphotransferase) domain 1 1104 1173 - -
Cpe05g00706 1278 ProSiteProfiles Protein kinase domain profile. 792 1156 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe05g00706 1278 Gene3D Phosphorylase Kinase; domain 1 790 875 - -
Cpe05g00706 1278 MobiDBLite consensus disorder prediction 24 53 - -
Cpe05g00706 1278 Gene3D Transferase(Phosphotransferase) domain 1 876 1048 - -
Cpe05g00706 1278 ProSiteProfiles AGC-kinase C-terminal domain profile. 1157 1258 IPR000961 GO:0004674|GO:0005524|GO:0006468
Cpe05g00706 1278 MobiDBLite consensus disorder prediction 1 61 - -
Cpe05g00706 1278 MobiDBLite consensus disorder prediction 82 114 - -
Cpe05g00706 1278 PANTHER SERINE/THREONINE-PROTEIN KINASE 951 1277 - -
Cpe05g00706 1278 PANTHER SERINE/THREONINE-PROTEIN KINASE 15 931 - -
Cpe05g00706 1278 PANTHER SERINE/THREONINE PROTEIN KINASE IRE-RELATED 951 1277 - -
Cpe05g00706 1278 Gene3D Phosphorylase Kinase; domain 1 1174 1188 - -
Cpe05g00706 1278 Pfam Protein kinase domain 792 1156 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe05g00706 Cpe13g00064 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g01104 Cpe-Chr2:10092720 Cpe05g00706 Cpe-Chr5:4326768 0 dispersed
Cpe05g00706 Cpe-Chr5:4326768 Cpe17g00198 Cpe-Chr17:1277546 1.39E-73 dispersed
Cpe13g00064 Cpe-Chr13:499080 Cpe05g00706 Cpe-Chr5:4326768 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62411 PF00069 Pkinase 3.30E-57 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe05g00706 - - csv:101210442 1910.96