Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe05g00706 | ATGTCCGAACCACCTCCCTCCGTCTTCGATCATGATCCCTCCCCCTCCGCCGCCAAGCTTCGTAAGATCCCTCCCATCCCTATTCGCCGCGATACCAAACCCAATGCCGGAGACTCTGATCCCGATCAAGAACATGACCACGCCGAGGATCATCCTCCTCAACCTGGCGATTCCTCCATCATAATGGCCTCCTCCCTCGGGTTGAACCACATTCGGACGCGGTCTGCTCCTCTTCCGCTTCGGACCTGTGCCGTTGGCACGCCCTCCAATTTGGGCGATGATTCCAGGAATAATGTCGCCGACGGGAGTGAGTCGGAGCCAAAAAATTCCTCCACTGAACAGGGTATGTGTAATGTAGAACGTATTATAATGTATGTGTATTTTGTTTTGTTTATCTTTGTGCTCTGTTTTGGTGCTTGGTTTCGCAAGCGGACAAACATTCCGTGGAGTCAACCGAACTCTTTAAGATATCCGTCGGCTCTGAATCATGATATCGAGGGTCATCATGCAACATATACAAAGGAAATTCAGTCTCCACGATTCCGTGCAATACTGCGTGTTACTAGTGGAAGAAAGAAGAGAACCCCTGATATCAAAAGCTTCTCTCACGAGCTCAATTCCAAAGGAGTTCGCCCTTTTCCAGTTTGGAAGCCTCGGGCATTTGGACATTTGGAAGAGATCATGGTTGCTATCAGAGCAAAATTTGACAGGTTAAAGGATGATGTTAACTACGAACTGGGCATTTTTGCTGGAGATCTCGTAGATATACTTGAAAAGGCAGATGGATCTATGCCTGAACTTAAGGAGGGTTTGGAGGATTTGTTGGTGGTTGCTCGGAAATGTGCGACAATGTCACCTACTGAATTCTGGACAAAAGGTGAAGGCATTGTCCAGAATCTAGATGACCGGCGCCAGGAGCTGTCATTAGGAATTCTTAAGCAAGCCCACACCCGCCTTCTTTTCATCCTGACACGATGTACGCGGCTTATTCAGTTCAGAAAGGAGAGTGGTTATGAAGATGAGCACATTTTGGGTCTTCATCAGCTTAGTGATCTAGGAATTTATCCAGAGAAAATCAGGCAACTCGAACAACTTGAGTTTGGTGATCCATTGACTGGGAAAGAAGATATTGCGAAGCAGCTGAAGTTAGTTGGGAAGGATCAAGCCCATCGCATTGTGAAGCAAGATTCAGAACAAACTTTTAGTAATAGTGCTGGAAATGTTAGTCTGGACTCTGCCGTAAGTTTTGATTCATCTACAAGCATGTATAGGATGGCATCCTGGAAAAAGCTACCATCAGCAGCTGAGAAGAACCGGAAAGACCCTGTCGATACAACACATGCCAAGGATAAAATTGAGGTGTTGCATGTACATGAAGCTAAAACTGGGAGCAATGAGAAATTAGATATCCCATCTAGTCATATTGAGCATTCAGAAGCACCCCCTAAAGAACAAAAAGTATCTTGGGGAATATGGGGTTATCATCAAAATGCCAATTTTGAGAGTTTGATGATCTGTCGGATTTGTGAGGTTGAAATTCCGACTATTCATGTTGAGGTGCATTCTCGAATTTGTACAATTGCCGATAGGTGTGATTTGAAAGGTTTAACTGTGAATGAGCGCCTTGAGCGGGTTGCTAGAGCTCTTGAAAAGATACTGGAGTCTTGGACGCCTAAAAGTACACCAAGAAGTAGCGATACTTCCTGTGCAAATTTTGATACTGTTAAGGTTTCTACATCAAATATGCAAGAAGAGATTTTTGAGTTGTCATCTAAAGGAATCAGTTTGTCATGTCGAAACTCTGAAGAGCTGCTTGATTCCCTCCCTGTTACTGGAAACTCTTCCTTTGTGGAAAGTCAGGATATTTTTCAGGATCAATCATACAATCGACCATTTATTTTCACACCAGAACACAGTACAAAATCAATGTCAGCTGGAACTCTAACACCAAGATCACCTCTTTTAACACCCAGGTCCAGTCAGATTGAATTGCTGTTGCATGGGCGAAGAGCAATATCTGAACTTGAAAATTATCAGCAGATATACAAATTGTTGGATATTGTTCGTTCCATTGCAAACGTTAACAACTCTGGCTATGGTGCATTGGAGTGTATGCTCGATCGATTAGAAGACCTTAAATATGCAATCCAGGATAGGAAGGTCGATGCCCTTGTTGTGGAGACTTTTGGAAGGCGCATAGAGAAGCTCTTGCAGGAAAAATATGTACAACTTTGTGGGCAAATAGAAGATGATAAAGTAGACTCTTCAATTGGCATAGTTGATGAAGAGAGTTCAGTGGAAGATGATACTGTTCGTAGTCTGCGTGCAAGTCCGGTTAACCCATGTTCAAAAGATCGAACATCTATTGAAGATTTTGAAATAATCAAACCAATTAGTAGAGGAGCCTATGGCCGAGTTTTCCTTGCCAGAAAACGAGCAACTGGAGACTTATTTGCAATAAAGGTTTTAAAGAAGGCTGATATGATTCGCAAGAATGCAGTAGAAAGTATTTTGGCTGAACGCAATATCCTTATCTCAGTTCGCAACCCTTTTGTGGTCCGCTTTTTCTACTCTTTCACATGTAGGGAAAATCTGTATCTGGTCATGGAATACTTAAATGGTGGTGATATTTACTCCTTACTGAGAAACCTAGGGTGCTTAGATGAAGATATGGCTCGGGTTTATATCGCTGAAATTGTTCTTGCTTTGGAGTATTTGCACTCCTTAAATGTGATTCACAGAGACTTAAAGCCAGATAACTTATTGATTGGTCAAGATGGTCACATTAAGATTGTTAGGATTCTAATAACATTTCCTGAAACCTTGAAGGAAGCGTCTAACTTGGAGAAGATTAAGTTGACAGATTTTGGGCTCTCCAAAATTGGTCTTATCAATAGTACAGATGATTTCTCAGGTCCATCAATCAATGGAACTGTTCCACTTGGAGACAATGGACCTATATCTCAATCTCTGTCAAAAAGAGAACACCGACAAAAGCATTCAGTTGTTGGTACTCCAGATTATTTGGCCCCTGAGATACTTCTGGGCATGGGACATGGTGTAACTGCGGATTGGTGGTCTGTTGGAGTAATTCTTTTTGAGATGCTTGTAGGACTACCGCCGTTCAATGCAGAAAGTCCACAGGTTGAACCTGCAACTGGTAATTTTCCCACCTCCTATCTTGATCTCCCTCTTGGCTATAATCCCAAGCGGGCCTCATTTTGGAACTCCTTGACCAAGGTAATTCCAATTCATTTAACCTTGCTACGCCACCCTTTGTTGGATAGAGTTATTATTCCATTGCAGCTAATTTTTGATAATATCATTAATAGAGACATACCATGGCCCAAGGTACCGGACGAGATGAGTTATGAAGCCCAGGATTTGATTGACAAATTGCTGACTGAAAATTCAGTTCAAAGACTGGGAGCTACAGGAGCCAGAGAGGTGAAGCAACATCCTTTCTTCAAGGATATTAATTGGGAAACTCTTGCAAGGCAGAAGGCCATGTTTATACCATCAGCAGAGCCACATGATACAAGTTATTTCATGAGTCGGTATATATGGAATCCAGAAGACGAGGACTTTAATGGTGCTAGTGACTTTGATGATCATGATTTGACAGATACCAGCAGTAGTTCATTTAGCAACCTACAAGATGAAGATGGAGACGAATGTGGTAGTTTGGCTGACTTCTGTACACCAGCCCTTTCTGTGAAGTACTCGTTCAGCAATTTCTCTTTCAAGAATTTATCACAGTTGGCTTCCATCAATTATGATTTGGTGGTGAAGAGCAGCCAAAACTCACCAGATATAACCAGACCATCCTTTCCTTGA | 3837 | 42.53 | MSEPPPSVFDHDPSPSAAKLRKIPPIPIRRDTKPNAGDSDPDQEHDHAEDHPPQPGDSSIIMASSLGLNHIRTRSAPLPLRTCAVGTPSNLGDDSRNNVADGSESEPKNSSTEQGMCNVERIIMYVYFVLFIFVLCFGAWFRKRTNIPWSQPNSLRYPSALNHDIEGHHATYTKEIQSPRFRAILRVTSGRKKRTPDIKSFSHELNSKGVRPFPVWKPRAFGHLEEIMVAIRAKFDRLKDDVNYELGIFAGDLVDILEKADGSMPELKEGLEDLLVVARKCATMSPTEFWTKGEGIVQNLDDRRQELSLGILKQAHTRLLFILTRCTRLIQFRKESGYEDEHILGLHQLSDLGIYPEKIRQLEQLEFGDPLTGKEDIAKQLKLVGKDQAHRIVKQDSEQTFSNSAGNVSLDSAVSFDSSTSMYRMASWKKLPSAAEKNRKDPVDTTHAKDKIEVLHVHEAKTGSNEKLDIPSSHIEHSEAPPKEQKVSWGIWGYHQNANFESLMICRICEVEIPTIHVEVHSRICTIADRCDLKGLTVNERLERVARALEKILESWTPKSTPRSSDTSCANFDTVKVSTSNMQEEIFELSSKGISLSCRNSEELLDSLPVTGNSSFVESQDIFQDQSYNRPFIFTPEHSTKSMSAGTLTPRSPLLTPRSSQIELLLHGRRAISELENYQQIYKLLDIVRSIANVNNSGYGALECMLDRLEDLKYAIQDRKVDALVVETFGRRIEKLLQEKYVQLCGQIEDDKVDSSIGIVDEESSVEDDTVRSLRASPVNPCSKDRTSIEDFEIIKPISRGAYGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDIYSLLRNLGCLDEDMARVYIAEIVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKIVRILITFPETLKEASNLEKIKLTDFGLSKIGLINSTDDFSGPSINGTVPLGDNGPISQSLSKREHRQKHSVVGTPDYLAPEILLGMGHGVTADWWSVGVILFEMLVGLPPFNAESPQVEPATGNFPTSYLDLPLGYNPKRASFWNSLTKVIPIHLTLLRHPLLDRVIIPLQLIFDNIINRDIPWPKVPDEMSYEAQDLIDKLLTENSVQRLGATGAREVKQHPFFKDINWETLARQKAMFIPSAEPHDTSYFMSRYIWNPEDEDFNGASDFDDHDLTDTSSSSFSNLQDEDGDECGSLADFCTPALSVKYSFSNFSFKNLSQLASINYDLVVKSSQNSPDITRPSFP | 1278 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 4326768 | 4338931 | - | Cp4.1LG05g07190.1 | Cpe05g00706 | 469911 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe05g00706 | 1278 | CDD | STKc_MAST_like | 798 | 1161 | - | - | |
Cpe05g00706 | 1278 | SMART | serkin_6 | 792 | 1156 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe05g00706 | 1278 | PANTHER | SERINE/THREONINE PROTEIN KINASE IRE-RELATED | 15 | 931 | - | - | |
Cpe05g00706 | 1278 | SUPERFAMILY | Protein kinase-like (PK-like) | 789 | 1188 | IPR011009 | - | |
Cpe05g00706 | 1278 | MobiDBLite | consensus disorder prediction | 88 | 114 | - | - | |
Cpe05g00706 | 1278 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 911 | 923 | IPR008271 | GO:0004672|GO:0006468 | |
Cpe05g00706 | 1278 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1104 | 1173 | - | - | |
Cpe05g00706 | 1278 | ProSiteProfiles | Protein kinase domain profile. | 792 | 1156 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe05g00706 | 1278 | Gene3D | Phosphorylase Kinase; domain 1 | 790 | 875 | - | - | |
Cpe05g00706 | 1278 | MobiDBLite | consensus disorder prediction | 24 | 53 | - | - | |
Cpe05g00706 | 1278 | Gene3D | Transferase(Phosphotransferase) domain 1 | 876 | 1048 | - | - | |
Cpe05g00706 | 1278 | ProSiteProfiles | AGC-kinase C-terminal domain profile. | 1157 | 1258 | IPR000961 | GO:0004674|GO:0005524|GO:0006468 | |
Cpe05g00706 | 1278 | MobiDBLite | consensus disorder prediction | 1 | 61 | - | - | |
Cpe05g00706 | 1278 | MobiDBLite | consensus disorder prediction | 82 | 114 | - | - | |
Cpe05g00706 | 1278 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 951 | 1277 | - | - | |
Cpe05g00706 | 1278 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 15 | 931 | - | - | |
Cpe05g00706 | 1278 | PANTHER | SERINE/THREONINE PROTEIN KINASE IRE-RELATED | 951 | 1277 | - | - | |
Cpe05g00706 | 1278 | Gene3D | Phosphorylase Kinase; domain 1 | 1174 | 1188 | - | - | |
Cpe05g00706 | 1278 | Pfam | Protein kinase domain | 792 | 1156 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe05g00706 | Cpe13g00064 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe02g01104 | Cpe-Chr2:10092720 | Cpe05g00706 | Cpe-Chr5:4326768 | 0 | dispersed | |
Cpe05g00706 | Cpe-Chr5:4326768 | Cpe17g00198 | Cpe-Chr17:1277546 | 1.39E-73 | dispersed | |
Cpe13g00064 | Cpe-Chr13:499080 | Cpe05g00706 | Cpe-Chr5:4326768 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
62411 | PF00069 | Pkinase | 3.30E-57 | CL0016 | Cpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe05g00706 | - | - | csv:101210442 | 1910.96 |