Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe05g00731 ATGTCCATTTTACTATCAATTTCCCCATCTTTGTCAGCCCCCAACGCCAAGGAGTTATGGTGCAGCCAAACCCCATACCCCGACATCTGCAAGAGCTTCTTCAACGCCAAATTCAACCCCAAAAACCTCGCCGAGTTCAAAAAAGCCGCCTTCAAAATCGCCATGGAAAGGGCTCTCACAGCCGAGTCGCTCACCAAGCGCCACGCCCAGAAATGCCGCACCCCCAAGGAAAAAGGCGCGTGGGCCGACTGCTTGGAGCTTTACCAAGACACCATTCTCCAGCTCAACCGAACCTTCTCCGACAACTATTGCTCCGATTTCGACATCCAAACATGGCTCAGCTCCGCGTTGACTAATCTTGATACATGTCGTGCCGGATTCGTTGACCTTAATATTAAGGATTACGACGTCGTTTTTCCTTTTCTTGGGAGGAGTAATAATGTGACTAAGTTGATTAGGAATAGTTTGGCTATGAATAACTGCTCTGAGACGGAGACGGGTTATCATGGTGGATTTCCTACGTGGGTTAAGGCTGGTGAACGGCGGCTGCTGCAGGCGGCGGTTCCTAAGCCGGACTTGGTTGTGGCGCTTGATGGGTCTGGGAATTATAAGACGGTGCAGGCGGCGGTGGATGCGGCGGCGAAGAGGAAAGGGAGTGGGAGATTTGTGATACATGTTAAGAAAGGGGTTTATAAGGAGAATGTTGTGATTGGGAATAAGGTCAAGAATTTGATGCTCGTCGGAGATGGGTTGAAGTATACCATTATTACTGGGAGTAGGAGTGTCGGCGGCGGCTCCACCACGTTCAACTCCGCCACCGTCGGCAGTGAAGGAGATCGCAGTGACGACTCAGTAAAATTCAAGCTCAACAGACCGGATTGCAGAGTCCTTTCCTCTTCCTGA 903 50.72 MSILLSISPSLSAPNAKELWCSQTPYPDICKSFFNAKFNPKNLAEFKKAAFKIAMERALTAESLTKRHAQKCRTPKEKGAWADCLELYQDTILQLNRTFSDNYCSDFDIQTWLSSALTNLDTCRAGFVDLNIKDYDVVFPFLGRSNNVTKLIRNSLAMNNCSETETGYHGGFPTWVKAGERRLLQAAVPKPDLVVALDGSGNYKTVQAAVDAAAKRKGSGRFVIHVKKGVYKENVVIGNKVKNLMLVGDGLKYTIITGSRSVGGGSTTFNSATVGSEGDRSDDSVKFKLNRPDCRVLSSS 300
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 4483697 4487410 + Cp4.1LG05g07260.1 Cpe05g00731 469936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe05g00731 300 Gene3D - 187 289 IPR012334 -
Cpe05g00731 300 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 20 161 IPR035513 -
Cpe05g00731 300 PANTHER PECTINESTERASE 4 279 - -
Cpe05g00731 300 Gene3D Invertase/pectin methylesterase inhibitor family protein 18 161 IPR035513 -
Cpe05g00731 300 CDD PMEI-like_3 19 160 - -
Cpe05g00731 300 Pfam Pectinesterase 192 280 IPR000070 GO:0030599|GO:0042545
Cpe05g00731 300 PANTHER PECTINESTERASE 4 279 - -
Cpe05g00731 300 ProSitePatterns Pectinesterase signature 1. 218 237 IPR018040 -
Cpe05g00731 300 SUPERFAMILY Pectin lyase-like 187 279 IPR011050 -
Cpe05g00731 300 SMART PMEI_2 9 158 IPR006501 GO:0004857
Cpe05g00731 300 TIGRFAM PME_inhib: pectinesterase inhibitor domain 18 160 IPR006501 GO:0004857
Cpe05g00731 300 Pfam Plant invertase/pectin methylesterase inhibitor 20 158 IPR006501 GO:0004857
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g01668 Cpe-Chr3:12742450 Cpe05g00731 Cpe-Chr5:4483697 5.84E-75 dispersed
Cpe05g00731 Cpe-Chr5:4483697 Cpe08g00473 Cpe-Chr8:3029761 9.38E-81 dispersed
Cpe14g00157 Cpe-Chr14:854214 Cpe05g00731 Cpe-Chr5:4483697 1.90E-34 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe05g00731 K01051 - csv:101216005 392.889