Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe05g00746 | ATGCCGGAATCGGAAAGTGGAACGCCGGTGCCGTCGGCTCCGGCGACGCCGGGGACGCCGGGAGGGCCGCTGTTTTCTGGGTTGCGGGTGGATTCGTTGTCGTACGATCGGAAGTCAATGCCGCGGTGTAAGTGCTTGCCCGTGAATGCTCCCACGTGGGGCCAGCCTCACACGTGCTTCACTGACTTTCCTGTTCCTGATGTTTCTCTCACCCGCAAGTTGGGAGCAGAATTCGTGGGAACATTCATCCTGATATTTGCGGCGACGGCAGGACCCATTGTGAATCAGAAGTACAACGGCGCCGAGACTCTGATCGGAAACGCTGCGTGTGCCGGGCTGGCCGTAATGATCGTAATTCTGTCGACGGGACACATCTCCGGCGCCCACCTAAACCCATCGCTCACCATTGCCTTCGCCGCTCTCCGCCACTTCCCATGGGTCCAAGTCCCTGCCTACATCGCTGCTCAGGTCTCTGCTTCCATTTGTGCCTCTTTTGCTCTTAAAGTCGGAGCTACAGTTATGGTGAACATTCTTGTCGCCGGGCCCTCAAGTGGTGGTTCCATGAACCCTGTTCGAACATTGGGCCCCGCCGTGGCTGCCGGAAATTACAGAGCATTATGGGTGTATCTAGTAGCACCAACGCTGGGAGCCATCGTCGGCGCGGGAACTTACACCGCCGTGAAGCTGCGAGACGACGAAGTGGATGCTCCGTCTCAGGTGAGGAGCTTCCGCCGCTGA | 738 | 58.54 | MPESESGTPVPSAPATPGTPGGPLFSGLRVDSLSYDRKSMPRCKCLPVNAPTWGQPHTCFTDFPVPDVSLTRKLGAEFVGTFILIFAATAGPIVNQKYNGAETLIGNAACAGLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWVQVPAYIAAQVSASICASFALKVGATVMVNILVAGPSSGGSMNPVRTLGPAVAAGNYRALWVYLVAPTLGAIVGAGTYTAVKLRDDEVDAPSQVRSFRR | 245 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 4577185 | 4580348 | + | Cp4.1LG05g07410.1 | Cpe05g00746 | 469951 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe05g00746 | 245 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
Cpe05g00746 | 245 | ProSitePatterns | MIP family signature. | 129 | 137 | IPR022357 | - | |
Cpe05g00746 | 245 | PRINTS | Major intrinsic protein family signature | 148 | 167 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe05g00746 | 245 | PRINTS | Major intrinsic protein family signature | 72 | 91 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe05g00746 | 245 | PRINTS | Major intrinsic protein family signature | 111 | 135 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe05g00746 | 245 | PANTHER | AQUAPORIN NIP5-1 ISOFORM X1-RELATED | 11 | 168 | - | - | |
Cpe05g00746 | 245 | PANTHER | AQUAPORIN NIP5-1 ISOFORM X1-RELATED | 168 | 243 | - | - | |
Cpe05g00746 | 245 | Pfam | Major intrinsic protein | 68 | 168 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe05g00746 | 245 | SUPERFAMILY | Aquaporin-like | 69 | 233 | IPR023271 | - | |
Cpe05g00746 | 245 | PANTHER | AQUAPORIN NIP2-1 | 11 | 168 | IPR034294 | - | |
Cpe05g00746 | 245 | PANTHER | AQUAPORIN NIP2-1 | 168 | 243 | IPR034294 | - | |
Cpe05g00746 | 245 | Gene3D | Glycerol uptake facilitator protein. | 168 | 239 | IPR023271 | - | |
Cpe05g00746 | 245 | Gene3D | Glycerol uptake facilitator protein. | 64 | 167 | IPR023271 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe05g00746 | Cpe-Chr5:4577185 | Cpe19g01091 | Cpe-Chr19:7401374 | 3.92E-43 | dispersed | |
Cpe05g00746 | Cpe-Chr5:4577185 | Cpe04g00059 | Cpe-Chr4:579274 | 4.39E-45 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe05g00746 | K09874 | - | csv:101212651 | 449.129 |