Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe05g00746 ATGCCGGAATCGGAAAGTGGAACGCCGGTGCCGTCGGCTCCGGCGACGCCGGGGACGCCGGGAGGGCCGCTGTTTTCTGGGTTGCGGGTGGATTCGTTGTCGTACGATCGGAAGTCAATGCCGCGGTGTAAGTGCTTGCCCGTGAATGCTCCCACGTGGGGCCAGCCTCACACGTGCTTCACTGACTTTCCTGTTCCTGATGTTTCTCTCACCCGCAAGTTGGGAGCAGAATTCGTGGGAACATTCATCCTGATATTTGCGGCGACGGCAGGACCCATTGTGAATCAGAAGTACAACGGCGCCGAGACTCTGATCGGAAACGCTGCGTGTGCCGGGCTGGCCGTAATGATCGTAATTCTGTCGACGGGACACATCTCCGGCGCCCACCTAAACCCATCGCTCACCATTGCCTTCGCCGCTCTCCGCCACTTCCCATGGGTCCAAGTCCCTGCCTACATCGCTGCTCAGGTCTCTGCTTCCATTTGTGCCTCTTTTGCTCTTAAAGTCGGAGCTACAGTTATGGTGAACATTCTTGTCGCCGGGCCCTCAAGTGGTGGTTCCATGAACCCTGTTCGAACATTGGGCCCCGCCGTGGCTGCCGGAAATTACAGAGCATTATGGGTGTATCTAGTAGCACCAACGCTGGGAGCCATCGTCGGCGCGGGAACTTACACCGCCGTGAAGCTGCGAGACGACGAAGTGGATGCTCCGTCTCAGGTGAGGAGCTTCCGCCGCTGA 738 58.54 MPESESGTPVPSAPATPGTPGGPLFSGLRVDSLSYDRKSMPRCKCLPVNAPTWGQPHTCFTDFPVPDVSLTRKLGAEFVGTFILIFAATAGPIVNQKYNGAETLIGNAACAGLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWVQVPAYIAAQVSASICASFALKVGATVMVNILVAGPSSGGSMNPVRTLGPAVAAGNYRALWVYLVAPTLGAIVGAGTYTAVKLRDDEVDAPSQVRSFRR 245
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 4577185 4580348 + Cp4.1LG05g07410.1 Cpe05g00746 469951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe05g00746 245 MobiDBLite consensus disorder prediction 1 24 - -
Cpe05g00746 245 ProSitePatterns MIP family signature. 129 137 IPR022357 -
Cpe05g00746 245 PRINTS Major intrinsic protein family signature 148 167 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe05g00746 245 PRINTS Major intrinsic protein family signature 72 91 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe05g00746 245 PRINTS Major intrinsic protein family signature 111 135 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe05g00746 245 PANTHER AQUAPORIN NIP5-1 ISOFORM X1-RELATED 11 168 - -
Cpe05g00746 245 PANTHER AQUAPORIN NIP5-1 ISOFORM X1-RELATED 168 243 - -
Cpe05g00746 245 Pfam Major intrinsic protein 68 168 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe05g00746 245 SUPERFAMILY Aquaporin-like 69 233 IPR023271 -
Cpe05g00746 245 PANTHER AQUAPORIN NIP2-1 11 168 IPR034294 -
Cpe05g00746 245 PANTHER AQUAPORIN NIP2-1 168 243 IPR034294 -
Cpe05g00746 245 Gene3D Glycerol uptake facilitator protein. 168 239 IPR023271 -
Cpe05g00746 245 Gene3D Glycerol uptake facilitator protein. 64 167 IPR023271 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g00746 Cpe-Chr5:4577185 Cpe19g01091 Cpe-Chr19:7401374 3.92E-43 dispersed
Cpe05g00746 Cpe-Chr5:4577185 Cpe04g00059 Cpe-Chr4:579274 4.39E-45 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe05g00746 K09874 - csv:101212651 449.129