Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe05g00747 ATGGGTTTGCTTCGATTCTTCAAGAAATCCAAACTTGCTCATAAAAAAGCCGTTCTTGACCATGTTTTTTTCGGTGCTGGGAAGTTCCGGTGGACTGAGATCGAGGCTTTTACTAATCATTTCTCCACCGTCGTCGGCTCCGGCGGCTTTAGCAAAGTGTATCTTGCTCGGATGACAGCCGGAGCGGCGGCGGTTAAGATTTTGGGCGGTAGTGAGCGGCTCAATCGGATGTTCCGGCAGGAGTTGGACATTCTCCTTCAGCTCCGGCACCGGAATATTGTCGGTTTCATTGGCTATTGCGATGAAGGAGATTTAGGAGCTTTAGTATTCGAATATGTCCCAAATGGGAATTTACAAGAGAAGCTCCACAGCCGACCGGCGGCGGCGGTGGTTCTGCCATGGAAAATCCGGCTGACCATAGCCTTTCAATTAGCCCAAGCAATCGAATATCTCCACGAGAAATGCAGACTACAAATCGTTCACAGCGATATAAAATCTTCAAACATTTTACTCGACGAACGATTCAATTGCAAATTGTGCGATTTCGGCTCTGCAAAAATGGGATTCTCGTCGGCGGTGGCGAATCAGTCGAATTACACCGTCGGCAGTGGTGGAGCTAGTGGATCCGCGGCTTCGGGGGGATTTCGATGGGGGAGAAGCGGGAGCCTTGCTCTCAATTGCGACGGCTTGCATATCGCAGCCGCCGGCGCCCAGGCCGACGATCGGTGGGGTGCTGCAAATGATGAAGGAGCGGATCGGGAAGATGAGCGGAGACACGTGGCGATAAATTATTGGGAAATGAGCGGT 807 51.43 MGLLRFFKKSKLAHKKAVLDHVFFGAGKFRWTEIEAFTNHFSTVVGSGGFSKVYLARMTAGAAAVKILGGSERLNRMFRQELDILLQLRHRNIVGFIGYCDEGDLGALVFEYVPNGNLQEKLHSRPAAAVVLPWKIRLTIAFQLAQAIEYLHEKCRLQIVHSDIKSSNILLDERFNCKLCDFGSAKMGFSSAVANQSNYTVGSGGASGSAASGGFRWGRSGSLALNCDGLHIAAAGAQADDRWGAANDEGADREDERRHVAINYWEMSG 269
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 4581358 4582854 - Cp4.1LG05g07500.1 Cpe05g00747 469952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe05g00747 269 Gene3D Transferase(Phosphotransferase) domain 1 113 213 - -
Cpe05g00747 269 ProSitePatterns Serine/Threonine protein kinases active-site signature. 159 171 IPR008271 GO:0004672|GO:0006468
Cpe05g00747 269 SMART serkin_6 39 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe05g00747 269 Pfam Protein kinase domain 42 188 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe05g00747 269 ProSiteProfiles Protein kinase domain profile. 39 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe05g00747 269 PANTHER BNAA02G22020D PROTEIN 25 203 - -
Cpe05g00747 269 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 25 203 - -
Cpe05g00747 269 SUPERFAMILY Protein kinase-like (PK-like) 27 195 IPR011009 -
Cpe05g00747 269 ProSitePatterns Protein kinases ATP-binding region signature. 45 66 IPR017441 GO:0005524
Cpe05g00747 269 Gene3D Phosphorylase Kinase; domain 1 24 112 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g00747 Cpe-Chr5:4581358 Cpe02g00602 Cpe-Chr2:3617870 2.01E-16 dispersed
Cpe05g00747 Cpe-Chr5:4581358 Cpe03g01085 Cpe-Chr3:8964791 2.16E-35 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62415 PF00069 Pkinase 3.90E-30 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe05g00747 - - cmax:111468884 312.383