Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe05g00748 ATGGAACCCGCTGCAGAACCTGGATCCGGATCCGGATCCGGATTGGAATTACCTCCATCTCAATCTCAATTTACAGTTTCGCCGCCGGATATCACCACTCCGTCTTTGACTGTAGACGCCATAACCGATTCTCAGCAAGTCGAAGTTGCTTCGCCGATTAGTAGTCGTCCTCCTGCATCGTCTTCCTTGAATTATGAGGAAATCTTTCGTCTCTCCACTACTGTCCAGATGCCGGTCGTCGGCGATGATGAAGCACTTGCCGGAGATGATGCCGACCGAACAACCGGGAGTAGCGGCGCTGGTAATCGATGGCCTCGTCAGGAAACTCTAGCGCTGCTTAGAATTAGGTCAGATATGGATTCCGCTTTCCGTGATGCGACACTCAAAGGTCCTCTGTGGGATGAAGTTTCCAGGAAGCTAACGGAATTGGGTTACAACAGAAGCGCCAAAAAATGCAAAGAGAAATTCGAGAACGTTCAGAAATATTACAAGCGCACTAAAGAAGGCCGTGGTGGCCGTCAAGATGGCAAAACCTACAAATTCTTCACACAACTTGAGGCACTTCACAACGCCTCCGCCTCCGCCTCCGCCTCCGCCTCCGCCTCCGCCGTCGCATCTACTCCCAACGTGGCGGTTTCTTGTTTCTCAGCGCCGCCCATTGGTTTTGGAATTAGTAACCCAACTCCAATCTCATCTGTCAAAATCTCTTCCACTGCTATTTCCTCACAGACCCCAATGGGAATCTATTCACCTGCTGACCATTTCACCGTCAGGCCACCGCCTGTGACCGCTCCTATGGGTGTCAGCTTTTCGTCGAACACCTCGTCTGCATCCACGGAGGAGGACGATAACGATGAAGATGAGATGGGGTTTGATGTTGACCTTGAAGGGGAGCCGTCGAGTGTCGCCGGAACCAGTCGGAAGCGGCGGAGGGGGGTGGTTAAGGGAAGTGGGTCGAGAACCCATAAGATGATGATGGAGTTTTTTGAGGGTTTGATGAAGGAAGTGATGCATAAACAGGAGGTTATGCAGCAGAAGTTTCTGGAAGCGATGGGGAAGAGAGAGCAGGATAGAATGATTAGAGAAGAGACGTGGAAAAGGCAAGAAATGGCTAGATTGAGCCGAGAGCAAGAGAGAATGGCACAAGAACGGACAATTTCTGCTTCTAGGGATGCCGCTATCATTGCTTTTCTTCAGAAATTTACTGGCCAAACCATTCAATTACCTGTGGTGAATATCCCTTCTTCTGTAGCCCCACACCACCAACATCAACAACATGATGTGCCTGTGCCTACGCCTACGCCTGTGCCTGTCCCAGTGTCAGTGCCCGTGCCATTATCTCCTGTCCCCCCTCCGCCATTGCAACCACAAACAGCTCTGTCACTGCAGCAAAATAAAAAAACCGCCCAGGATCAGAATCCGCCGCCTTCAAATACACTGTCGCCATTGGATCAGCCAATGCCATATCAGGAAATCAGCCATGGGGGAGATGGGAGTGCCGAACCCTTCTCTTCAAGATGGCCCAAACCAGAAGTTCTAGCTCTGATTAAGCTGAGAGGTGGGCTTGAAACGAGGTATCAAGAGACAGGTCCAAAGGGTCTTCTCTGGGAAGAGATATCAGCTGGAATGCAACGGATGGGTTACAAGAGAAGCGCCAAAAGATGCAAGGAGAAATGGGAAAACATCAATAAGTACTTCAAGAAGGTGAAAGAAAGCAACAAAAAACGCCGCGAGGATTCCAAAACCTGCCCCTATTTCAACGAACTCGACGCCCTTTACCGCAAAAAGATCCTCGGCAGCAGCAGCGGCGGCGGCGGTGGTTCTGATGGCGGTGGTAGTGGCAGTAGAAGCTCGTTTAGCGACACGAGCAAAACCGAACAAGACCCCATTAAGAATATGGACACGGAAATGGCCCCATCAACAGCTACAGAAACTTCTCAAACCATACTCACTGAAGGCCTATCCGCAAGCCTCTTCGGTGAAGGAACTGAAGAACAACCAGCAACATCCACGAAGCCAGAAGACATTGTGAATGAGCTGATGGAGCTGCATGAGCTCTACCGACCTGATAGCAACAATGAAGAAGAGTATTGCAGCGAAGATGAGGATGATACACCAGACAACGAGGACAAGGACAAGAACAAGAACACAAAGAACACGAAGAACATGGATTACAAAATAGAGTTTGAGAGAAGAAATGCAGGGAGCTCCAATGGCGTGGGGAATGAGTTTCAGTCAATGGCGGTGGTTCAATAG 2256 50.04 MEPAAEPGSGSGSGLELPPSQSQFTVSPPDITTPSLTVDAITDSQQVEVASPISSRPPASSSLNYEEIFRLSTTVQMPVVGDDEALAGDDADRTTGSSGAGNRWPRQETLALLRIRSDMDSAFRDATLKGPLWDEVSRKLTELGYNRSAKKCKEKFENVQKYYKRTKEGRGGRQDGKTYKFFTQLEALHNASASASASASASAVASTPNVAVSCFSAPPIGFGISNPTPISSVKISSTAISSQTPMGIYSPADHFTVRPPPVTAPMGVSFSSNTSSASTEEDDNDEDEMGFDVDLEGEPSSVAGTSRKRRRGVVKGSGSRTHKMMMEFFEGLMKEVMHKQEVMQQKFLEAMGKREQDRMIREETWKRQEMARLSREQERMAQERTISASRDAAIIAFLQKFTGQTIQLPVVNIPSSVAPHHQHQQHDVPVPTPTPVPVPVSVPVPLSPVPPPPLQPQTALSLQQNKKTAQDQNPPPSNTLSPLDQPMPYQEISHGGDGSAEPFSSRWPKPEVLALIKLRGGLETRYQETGPKGLLWEEISAGMQRMGYKRSAKRCKEKWENINKYFKKVKESNKKRREDSKTCPYFNELDALYRKKILGSSSGGGGGSDGGGSGSRSSFSDTSKTEQDPIKNMDTEMAPSTATETSQTILTEGLSASLFGEGTEEQPATSTKPEDIVNELMELHELYRPDSNNEEEYCSEDEDDTPDNEDKDKNKNTKNTKNMDYKIEFERRNAGSSNGVGNEFQSMAVVQ 751
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 4588907 4592538 + Cp4.1LG05g07390.1 Cpe05g00748 469953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe05g00748 751 SMART sant 503 565 IPR001005 -
Cpe05g00748 751 SMART sant 100 162 IPR001005 -
Cpe05g00748 751 Pfam Myb/SANT-like DNA-binding domain 102 188 IPR044822 -
Cpe05g00748 751 Pfam Myb/SANT-like DNA-binding domain 505 592 IPR044822 -
Cpe05g00748 751 PANTHER TRIHELIX TRANSCRIPTION FACTOR GT-2 45 605 - -
Cpe05g00748 751 MobiDBLite consensus disorder prediction 458 486 - -
Cpe05g00748 751 MobiDBLite consensus disorder prediction 677 694 - -
Cpe05g00748 751 ProSiteProfiles Myb-like domain profile. 505 563 IPR001005 -
Cpe05g00748 751 MobiDBLite consensus disorder prediction 279 294 - -
Cpe05g00748 751 ProSiteProfiles Myb-like domain profile. 102 160 IPR001005 -
Cpe05g00748 751 MobiDBLite consensus disorder prediction 606 626 - -
Cpe05g00748 751 MobiDBLite consensus disorder prediction 14 36 - -
Cpe05g00748 751 MobiDBLite consensus disorder prediction 600 646 - -
Cpe05g00748 751 MobiDBLite consensus disorder prediction 441 457 - -
Cpe05g00748 751 MobiDBLite consensus disorder prediction 735 751 - -
Cpe05g00748 751 Gene3D - 507 568 - -
Cpe05g00748 751 Gene3D - 104 165 - -
Cpe05g00748 751 CDD GT1 102 167 - -
Cpe05g00748 751 MobiDBLite consensus disorder prediction 1 36 - -
Cpe05g00748 751 MobiDBLite consensus disorder prediction 708 731 - -
Cpe05g00748 751 MobiDBLite consensus disorder prediction 265 319 - -
Cpe05g00748 751 PANTHER - 45 605 - -
Cpe05g00748 751 MobiDBLite consensus disorder prediction 660 751 - -
Cpe05g00748 751 MobiDBLite consensus disorder prediction 441 505 - -
Cpe05g00748 751 CDD GT1 505 570 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g00024 Cpe-Chr4:217484 Cpe05g00748 Cpe-Chr5:4588907 8.73E-11 dispersed
Cpe04g01607 Cpe-Chr4:12505583 Cpe05g00748 Cpe-Chr5:4588907 8.19E-10 dispersed
Cpe05g00748 Cpe-Chr5:4588907 Cpe16g00074 Cpe-Chr16:1518395 1.10E-14 dispersed
Cpe17g00943 Cpe-Chr17:7242980 Cpe05g00748 Cpe-Chr5:4588907 4.17E-08 dispersed
Cpe18g00894 Cpe-Chr18:8062912 Cpe05g00748 Cpe-Chr5:4588907 2.41E-09 dispersed
Cpe20g00654 Cpe-Chr20:4154198 Cpe05g00748 Cpe-Chr5:4588907 1.45E-14 dispersed
Cpe05g00748 Cpe-Chr5:4588907 Cpe02g00878 Cpe-Chr2:6200108 3.22E-23 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
49529 PF13837 Myb_DNA-bind_4 4.60E-22 CL0123 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe05g00748 - - cpep:111795959 1269.6