Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe05g00755 ATGAGTTCCCATACTTCCTCTGAAGATTGTCTCGGTTGGGCCGCAAGAGATCCGTCTGGATTTCTGTCCCCTTATAAATTCAGTCGTAGGGTTCCTGGAGATGATGATGTTTCAATTACAATAACACATTGCGGAATTTGTTATGCAGACGTATTATGGACAAGAAATAAATTAGGAGATTCAAAATATCCTTTGGTGCCTGGACATGAGATTGCAGGAATTGTGAAAACTGTTGGCGCAAATGTTCACCGATTTAAAGTTGGAGATCATGTTGGGGTAGGAACTTACGTGAATTCTTGCAGACAATGCGAGTATTGTGAAGATGGTCAAGAAGTTTGTTGCACGGGTGGATCCACTAATACTTTTAATGGAATTGATTTTGACGGTACAATTACAAAGGGAGGATATTCTAACTACATAGTTGTCCATGAGAGATACTGCTACAGAATTCCTGAGAATTATCCTTTAGCTTCAGCTGCTCCTTTGCTTTGTGCTGGAATTACAGTTTATTCTCCAATGATTCGTCATAAGATGAATCAACCTGGTAAATCTCTAGGAGTGATTGGTCTTGGTGGTCTCGGCCACTTGGCAGTGAAGTTCGGGAAGGCTTTTGGACTAAATGTGACAGTTTTTAGCACTAGCATATCCAAGAAAGAAGAAGCCCTGAGCGTTCTTGGAGCAGACAAATTTGTTCTCTCATCTGATACCGAGCAAATGGAGGCCTTGTCTAAGTCCCTTGACTTCATTATCGATGCTGCATCTGGTGATCATCCATTTGATCCATACATGTCTACATTGAAGGTTGGTGGCACTATGGTTCTGGTTGGGTTTCCTTCTCAAGTCAAATTCAGTCCTGCAAGCCTAAATTTGGGTATGAGAACTATTTCTGGGAGCGTAACTGGAGGCACTCGAGTGACCCAAGAAATGATCGACTTCTGTGCTGCTCATGGAATCTATCCAAACATTGACGTGATTCCAATTCAATACTCTAATGAAGCCATTGAAAGGGTAATAAAAAACGATGTCAAGTACCGATTTGTAATTGATATTCAAGGCTCCCTAAAATGA 1068 41.2 MSSHTSSEDCLGWAARDPSGFLSPYKFSRRVPGDDDVSITITHCGICYADVLWTRNKLGDSKYPLVPGHEIAGIVKTVGANVHRFKVGDHVGVGTYVNSCRQCEYCEDGQEVCCTGGSTNTFNGIDFDGTITKGGYSNYIVVHERYCYRIPENYPLASAAPLLCAGITVYSPMIRHKMNQPGKSLGVIGLGGLGHLAVKFGKAFGLNVTVFSTSISKKEEALSVLGADKFVLSSDTEQMEALSKSLDFIIDAASGDHPFDPYMSTLKVGGTMVLVGFPSQVKFSPASLNLGMRTISGSVTGGTRVTQEMIDFCAAHGIYPNIDVIPIQYSNEAIERVIKNDVKYRFVIDIQGSLK 355
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 4663821 4667855 + Cp4.1LG05g07540.1 Cpe05g00755 469960
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe05g00755 355 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270|GO:0016491
Cpe05g00755 355 Gene3D - 165 320 - -
Cpe05g00755 355 SUPERFAMILY GroES-like 16 183 IPR011032 -
Cpe05g00755 355 Pfam Alcohol dehydrogenase GroES-like domain 35 149 IPR013154 -
Cpe05g00755 355 Pfam Zinc-binding dehydrogenase 192 314 IPR013149 -
Cpe05g00755 355 CDD CAD1 12 349 - -
Cpe05g00755 355 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 185 212 IPR029752 -
Cpe05g00755 355 PANTHER ALDEHYDE REDUCTASE 2 354 - -
Cpe05g00755 355 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 155 318 IPR036291 -
Cpe05g00755 355 SMART PKS_ER_names_mod 20 348 IPR020843 GO:0016491
Cpe05g00755 355 Gene3D - 13 350 - -
Cpe05g00755 355 PANTHER - 2 354 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g00755 Cpe-Chr5:4663821 Cpe10g00530 Cpe-Chr10:3105169 4.51E-112 dispersed
Cpe05g00755 Cpe-Chr5:4663821 Cpe16g00065 Cpe-Chr16:1275558 1.06E-101 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe05g00755 K00083 - csv:101211438 654.44