Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe05g00762 ATGGAAGTGCAAAATCATGATCATGGTCACATGATTGAAGTAAGTGGAGATGTGCAAGCAGTAGGGCCTAGCATTGTGGGAAGTAAAATTTGTGGGGAGGCACCTTCCTGTGGATTTAAAGATGCAAAAAACAGTTCGATTGATATGAGGGAGCGAAATGCATCGATGCGGAAGCTTTTCATAGCAGCTGTTTGCTGCATCGTTTTTATGAGTATAGAAGTAGTGGGAGGTATTAAAGCAAACAGTCTTGCAATATTGACTGATGCTGCTCATTTGTTGTCGGATGTTGCTGCTTTTGCCATTTCCTTGTTCTCTCTCTGGGCCTCTGGTTGGGAGGCAACTCCGCGCCAGTCATATGGGTTCTTCCGGATTGAAATACTTGGTGCCCTCGTTTCCATTCAGATGATCTGGCTTCTTGCTGGGATTCTTGTTTATGAAGCCATTGTCCGCCTTATCAATGGTCCGGGAGAAGTCAAGGGGCTGCTCATGTTTGCTGTTTCTGCATTTGGGTTGGTTGTTAACATAGCTATGGCTCTGCTGCTCGGTCACGAACATGGTCATGCTCATTCTCATGGTCACAGTCATGGACATGGTGATCACGACCACGGTCATGGCAGCCACGAACATGGTCATGAAGATCATAGGCATCACCATGGGATTAGTGTTACCGCACACCACCACCACCCCCACCCCCACCACGAAGAAGAGGGAGCTGCCGGCGATAGTGTTAAGCATCACCATCATCACGCACATGAGGAATCAGTAACTACACCCTTACTTGAAAGCCATTCACAAAAGGTTACCAAGACACAGAAAAGAGAACGAAACATAAACGTCCAGGGGGCTTACCTTCACGTACTCGGAGATTCCATCCAAAGCATCGGAGTGATGATTGGCGGGGCAATCATATGGTATAAACCCGAATACAAGATTCTTGATCTGATATGCACTCTCATTTTCTCTGTAATTGTGCTATACACAACAATTCAAATGCTCCGAAACATCCTCGAGGTTCTAATGGAGAGTACACCGCGAGAGATTGATGCGACGAAGCTCGAGAAGGGTCTGTGTGAGATGGAGGAGGTAGTTGCAGTTCATGAACTGCACATCTGGGCGATAACGGTTGGAAAGGTTCTATTGGCATGCCATGTTATAATAAAGCCAGAGGCAAATGCAGATATGGTATTGGACAATGTTATAGAGTATATCAAAAGAGAGTACAACATCAGCCATGTCACCATTCAGATAGAGCGCCAGTAG 1260 46.11 MEVQNHDHGHMIEVSGDVQAVGPSIVGSKICGEAPSCGFKDAKNSSIDMRERNASMRKLFIAAVCCIVFMSIEVVGGIKANSLAILTDAAHLLSDVAAFAISLFSLWASGWEATPRQSYGFFRIEILGALVSIQMIWLLAGILVYEAIVRLINGPGEVKGLLMFAVSAFGLVVNIAMALLLGHEHGHAHSHGHSHGHGDHDHGHGSHEHGHEDHRHHHGISVTAHHHHPHPHHEEEGAAGDSVKHHHHHAHEESVTTPLLESHSQKVTKTQKRERNINVQGAYLHVLGDSIQSIGVMIGGAIIWYKPEYKILDLICTLIFSVIVLYTTIQMLRNILEVLMESTPREIDATKLEKGLCEMEEVVAVHELHIWAITVGKVLLACHVIIKPEANADMVLDNVIEYIKREYNISHVTIQIERQ 419
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 4714423 4718359 - Cp4.1LG05g07570.1 Cpe05g00762 469967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe05g00762 419 MobiDBLite consensus disorder prediction 186 273 - -
Cpe05g00762 419 PANTHER METAL TOLERANCE PROTEIN A1 1 418 - -
Cpe05g00762 419 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 1 418 - -
Cpe05g00762 419 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 346 417 IPR036837 -
Cpe05g00762 419 MobiDBLite consensus disorder prediction 194 219 - -
Cpe05g00762 419 TIGRFAM CDF: cation diffusion facilitator family transporter 56 419 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Cpe05g00762 419 Pfam Cation efflux family 59 340 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Cpe05g00762 419 Gene3D Cation efflux protein transmembrane domain 55 339 IPR027469 -
Cpe05g00762 419 MobiDBLite consensus disorder prediction 228 256 - -
Cpe05g00762 419 SUPERFAMILY Cation efflux protein transmembrane domain-like 53 341 IPR027469 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g01164 Cpe-Chr2:10553611 Cpe05g00762 Cpe-Chr5:4714423 1.67E-26 dispersed
Cpe05g00762 Cpe-Chr5:4714423 Cpe11g00094 Cpe-Chr11:507367 1.39E-07 dispersed
Cpe05g00762 Cpe-Chr5:4714423 Cpe02g01210 Cpe-Chr2:10981278 1.48E-42 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe05g00762 K14689 - csv:101213602 640.958