Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe05g00799 ATGGCTTTCTTTCAACCCCTTCTTACTCCGCCCGTTCATTGTTCATTAACTCTTTTTCTCTTTTTCCTCGTCGTTGTACCATTGCTTCCTCCCGCCGCCCCCATGCCTTTGCACGAAGTTTACTCTCCTCGCTTGGCCTATAGGGGTCCGGTTATTCCGGTCAGCAATCTCGTCAAGTTTCTCGAGCGTCTTCAGGTTGTGGCGCTCAATTCCTTTGGTAAACTTGATTTCGATCTTAAATATTACGTCGATTTGTCGCTTAAATTTGATTTGAATTCCACTGAGAGGGCTTTTGATGCCCTTTCACGATCCTCCAATGGCTCTGTCCCGGTTGAGGATTTGAAGTCGTTTATTAGCGAGTATTTCGATAGTGCTGGAACTGATATGGTGTACTCCGACCCGGTGGATTTTGTCCCTCGGCCTCAAGGGTTTTTGCCGAAGGTGGAGAATGCGGAGGTTAGAGCTTGGGCTTTGGAGATTCATAATTACTGGAAGAATCTTAGTCGGAAAGTCTCCGATGATATCATTCATCGCCCCGATGCTCACACTCTGCTGCCGTTGCCGATGCCCTGTATCATTCCCGGAGCCAGATTCCGGGAAGTTTACTATTGGGATTCCTATTGGATTATCAGAGGATTGTTAGCTAGTAAAATGTATGATACTGCCAAGGGAATTGTTATCAATCTCATTTCAATGATTGATGAGTTTGGCCATGTTTTGAATGGTGCTAGAGCTTATTACACTAACAGAAGTCAGCCTCCTCTCTTGAGTTCCATGGTTTATGACATATACCTTAGAACAGGTGATTTAGAGTTCGTGAGGAATTCCCTCCCAGCTTTGATCAAAGAGCATATGTTCTGGAATTCAGGATTCCATTCTGTTACTGTCCGGAAGGCTCCTGGTGGAAATCATTCTTTGTCTAGATATTATGCAATGTGGAATGAACCCAGGCCTGAATCTTCTCTGCTGGATGAGAAACTTGCCTCAAAGTTTGTGAATAACTACGACAAGCAGCGTCTATACCGTGAACTCGCATCGGCTGCCGAATCTGGTTGGGATTTCAGTTCAAGATGGATGAGGGATCACACGGACTTATCAACATTGGCTACAACTTCAATCTTGCCAGTTGATCTCAATGTATTCATACTCAAGATGGAACTTGACATCTCCAATTTGGCAAGAGCTGTTGGAGATTTCTGCCTTGCTTATAAATTTTTGGAGGCTTCACTAGTCAGAAAGAAGACAATCAACTCTATTTTCTGGAACTCAGAGAAGGGACAATGGCTTGATTACTGGCTTGATAATGGCTCTCACAAGGGTGTTCATGCATGGGATGCTCGGAGCCAGAACAAGAACATATATGCTTCGAACTTCATTCCGCTCTGGATCGAATCGTTCTACAACGACAGCATACAGATGAAGAAAGTGTTGAAAAGCTTACGGAAGTCAGGCTTGCTATGCAATGCCGGGATTGCAACTTCTACTATTAATTCAGGAGAACAATGGGATTTCCCGAATGGTTGGGCGCCAATTCAGCACATGATCATCGAGGGACTGGCGAGATCGGAGTTGAAAGAAGCAAGGGTATTGGCTGAGGATATGGCCGTGAGATGGCTTCGAACCAACTATGTGGCTTACAAGAAAACAGGGTATATGCATGAGAAATATGATGTCCAAAAGTGTGGAGACTTTGGCGCAGGAGGTGAATATGTCCCTCAGACTGGTTTTGGATGGTCAAATGGAGTTGTCTTGGCTTTCCTTGAAGAGTTTGGATGGCCCGAAGATCAAAATATTGACTGCTAA 1803 44.65 MAFFQPLLTPPVHCSLTLFLFFLVVVPLLPPAAPMPLHEVYSPRLAYRGPVIPVSNLVKFLERLQVVALNSFGKLDFDLKYYVDLSLKFDLNSTERAFDALSRSSNGSVPVEDLKSFISEYFDSAGTDMVYSDPVDFVPRPQGFLPKVENAEVRAWALEIHNYWKNLSRKVSDDIIHRPDAHTLLPLPMPCIIPGARFREVYYWDSYWIIRGLLASKMYDTAKGIVINLISMIDEFGHVLNGARAYYTNRSQPPLLSSMVYDIYLRTGDLEFVRNSLPALIKEHMFWNSGFHSVTVRKAPGGNHSLSRYYAMWNEPRPESSLLDEKLASKFVNNYDKQRLYRELASAAESGWDFSSRWMRDHTDLSTLATTSILPVDLNVFILKMELDISNLARAVGDFCLAYKFLEASLVRKKTINSIFWNSEKGQWLDYWLDNGSHKGVHAWDARSQNKNIYASNFIPLWIESFYNDSIQMKKVLKSLRKSGLLCNAGIATSTINSGEQWDFPNGWAPIQHMIIEGLARSELKEARVLAEDMAVRWLRTNYVAYKKTGYMHEKYDVQKCGDFGAGGEYVPQTGFGWSNGVVLAFLEEFGWPEDQNIDC 600
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 4952650 4956554 - Cp4.1LG05g08040.1 Cpe05g00799 470004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe05g00799 600 PANTHER TREHALASE 64 600 IPR001661 GO:0004555|GO:0005991
Cpe05g00799 600 Pfam Trehalase 75 591 IPR001661 GO:0004555|GO:0005991
Cpe05g00799 600 SUPERFAMILY Six-hairpin glycosidases 72 593 IPR008928 GO:0005975
Cpe05g00799 600 PANTHER TREHALASE 64 600 - -
Cpe05g00799 600 ProSitePatterns Trehalase signature 2. 501 510 IPR018232 GO:0004555|GO:0005991
Cpe05g00799 600 Gene3D - 63 599 IPR012341 GO:0005975
Cpe05g00799 600 PRINTS Glycosyl hydrolase family 37 signature 236 254 IPR001661 GO:0004555|GO:0005991
Cpe05g00799 600 PRINTS Glycosyl hydrolase family 37 signature 306 323 IPR001661 GO:0004555|GO:0005991
Cpe05g00799 600 PRINTS Glycosyl hydrolase family 37 signature 341 358 IPR001661 GO:0004555|GO:0005991
Cpe05g00799 600 PRINTS Glycosyl hydrolase family 37 signature 373 390 IPR001661 GO:0004555|GO:0005991
Cpe05g00799 600 PRINTS Glycosyl hydrolase family 37 signature 416 432 IPR001661 GO:0004555|GO:0005991
Cpe05g00799 600 PRINTS Glycosyl hydrolase family 37 signature 494 510 IPR001661 GO:0004555|GO:0005991
Cpe05g00799 600 PRINTS Glycosyl hydrolase family 37 signature 574 587 IPR001661 GO:0004555|GO:0005991
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe05g00799 K01194 - csv:101208719 1027.7