Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe05g00811 GTTGACTACATTAGAACTCCGGCCAGAGGTTCATTTGGGGAGATCTTTATGGCTTATGGTAGTTCTAGATCCGTAAGATTCCAAGATGATCTTGAATCATCCACCCTGCCTACTATCAATGGTGGTGGCGTGAAGAAGATCATATACAACCTTGATGGCACACATATACCAGAATCGACGGCTTCCAGGAAGTCTGGAAGATCCTTGCGAGCTAAAGTTCTGTCTAGAGTTTTCTCTGAGGATTATGAGAGAGTGCAAAGAAAAATATTGGATCCTAGAGGACAAGCCATAAGGAGATGGAATAAAATCTTTCTAGTAGCTTGTTTAATCTCTTTGTTTGTAGACCCACTTTTCTTTTACTTGCCTGTCGTCCGGGATAACGTCTGCATTGATATAGGAGTAGGTCTCGAAGTCGTCCTCACAATTATAAGAACAATAGCTGATGTTTTCTACACAGTTCATATTCTCATTAAGTTCCGTACAGCTTATGTCGCGCCCTCTTCTCGTGTATTTGGGAGAGGAGAGCTTGTTATAGACACTTGTAAGATAGCAGTAAGGTATCTACGGCATGGTTTCTGGATTGATTTCATTGCAGCAGTGCCAGTTCCTCAGGTACTGATATGGATTGTCATCCCCAACCTCAGTGGCTCAATAATGACAAACACCAAGAACTTTCTGCGGTTCTTTCTCATATTCCAGTACATCCCAAGGCTTTTTCTCATATTTCCTCTCTCAACACAAATTGTTAAGGCCACTGGACTTGTGACACAAACAGCATGGGCTGGAGCTGCTTATAACCTGATCCTGTATATGTTGGCAAGCCATGTTCTAGGAGCTTGCTGGTACCTTCTTTCAATTGAGCGACAAGAAGCATGCTGGAGAACACTTTGTAAGTTTGACAAATCTTGTAACAATGGATTCTTCGACTGTCATAAGATCGATGACCCTCAAAGGGGCTCGTGGTTTCGTACGAGCAACATCAAAAACACATGCAATCCAAATGATCCCTTTTATCAATTTGGTATATATGGTGATTCAATAACTTTCCATGTCACAACCTCACCGTTTTTCAACAAGTACTTCTACTGTCTTTGGTGGGGTCTGAAAAATCTCAGTTCCTTGGGACAAAATCTTGCCACAAGCACTTTTGTTGGGGAAATAGTTTTTGCCATAATTGTGGCAACTCTTGGACTGGTTCTGTTTGCATTGCTCATTGGCAATATGCAGAAATACCTCCAATCGACGACTGTCCGGTTAGAAGAGTGGAGAATAAGGAGAACTGATACAGAGCAATGGATGCATCACAGGCAGCTACCTCCAGAGCTCAGACAATCTGTCCGCAGATATGATCAGTATAAGTGGGTAGCAACTCGAGGAGTTGATGAAGAATCGCTGCTTAGAAGCCTTCCATTGGATCTCCGAAGAGACATAAAACGTCACCTCTGCCTCGATCTTGTTCGAAGGGTTCCATTGTTCGATCAAATGGATGAAAGAATGCTAGATGCAATATGCGAGAGACTTAAGCCTGCCTTGAGCACAGAAGGCACATTTCTGGTGCGAGAGGGAGATCCAGTCAATGAAATGCTATTCATAATCAGAGGACATCTCGATTCATACACCACTAATGGCGGCAGAACAGGATTCTTCAACTCCTGTTGTATCGGTCCAGGTGATTTCTGTGGTGAGGAGCTACTAACATGGGCACTCGATCCTCGTCCCAGCGTTGTACTTCCTTCTTCCACTCGCACGGTCAAAGCCATCTCAGAAGTAGAAGCATTCGCTCTCATAGCAGAGGATTTGAAATTCGTATCCTCCCAGTTCAGAAGACTCCACAGCAAACAACTCAGACACAAATTTCGATTCTACTCGCATCAATGGCGAACATGGGCTGCCTGCTTTGTTCAAGCAGCATGGCGGCGATATAAGAGACGCAAAGGAAGAGCCGAGCTCATGGCTAGAGAGAGGTATCCAGCTACCAACCTCGACTCGCCATTTTCACCACCAACTGCATCAAATTCGGATACATGTTCAGGAAACCCTAGAATAAGGATGAACAAGCGCTGTGTGTCGGATGCTGGGGTAGTAAGCTCACTGCAGAAGCCAGAAGAGCCCGACTTCTCCATTGTTGAGGAATGA 2136 44.38 VDYIRTPARGSFGEIFMAYGSSRSVRFQDDLESSTLPTINGGGVKKIIYNLDGTHIPESTASRKSGRSLRAKVLSRVFSEDYERVQRKILDPRGQAIRRWNKIFLVACLISLFVDPLFFYLPVVRDNVCIDIGVGLEVVLTIIRTIADVFYTVHILIKFRTAYVAPSSRVFGRGELVIDTCKIAVRYLRHGFWIDFIAAVPVPQVLIWIVIPNLSGSIMTNTKNFLRFFLIFQYIPRLFLIFPLSTQIVKATGLVTQTAWAGAAYNLILYMLASHVLGACWYLLSIERQEACWRTLCKFDKSCNNGFFDCHKIDDPQRGSWFRTSNIKNTCNPNDPFYQFGIYGDSITFHVTTSPFFNKYFYCLWWGLKNLSSLGQNLATSTFVGEIVFAIIVATLGLVLFALLIGNMQKYLQSTTVRLEEWRIRRTDTEQWMHHRQLPPELRQSVRRYDQYKWVATRGVDEESLLRSLPLDLRRDIKRHLCLDLVRRVPLFDQMDERMLDAICERLKPALSTEGTFLVREGDPVNEMLFIIRGHLDSYTTNGGRTGFFNSCCIGPGDFCGEELLTWALDPRPSVVLPSSTRTVKAISEVEAFALIAEDLKFVSSQFRRLHSKQLRHKFRFYSHQWRTWAACFVQAAWRRYKRRKGRAELMARERYPATNLDSPFSPPTASNSDTCSGNPRIRMNKRCVSDAGVVSSLQKPEEPDFSIVEE 711
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 5023238 5026529 + Cp4.1LG05g07980.1 Cpe05g00811 470016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe05g00811 711 Pfam Ion transport protein 100 418 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Cpe05g00811 711 Gene3D Helix hairpin bin 418 482 - -
Cpe05g00811 711 SUPERFAMILY Voltage-gated potassium channels 91 413 - -
Cpe05g00811 711 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 23 710 - -
Cpe05g00811 711 PRINTS EAG/ELK/ERG potassium channel family signature 272 282 IPR003938 GO:0005249|GO:0006813|GO:0016020
Cpe05g00811 711 PRINTS EAG/ELK/ERG potassium channel family signature 454 461 IPR003938 GO:0005249|GO:0006813|GO:0016020
Cpe05g00811 711 PRINTS EAG/ELK/ERG potassium channel family signature 386 397 IPR003938 GO:0005249|GO:0006813|GO:0016020
Cpe05g00811 711 PRINTS EAG/ELK/ERG potassium channel family signature 155 164 IPR003938 GO:0005249|GO:0006813|GO:0016020
Cpe05g00811 711 PRINTS EAG/ELK/ERG potassium channel family signature 404 413 IPR003938 GO:0005249|GO:0006813|GO:0016020
Cpe05g00811 711 PRINTS EAG/ELK/ERG potassium channel family signature 360 377 IPR003938 GO:0005249|GO:0006813|GO:0016020
Cpe05g00811 711 CDD CAP_ED 491 622 IPR000595 -
Cpe05g00811 711 PANTHER - 23 710 - -
Cpe05g00811 711 SUPERFAMILY cAMP-binding domain-like 421 616 IPR018490 -
Cpe05g00811 711 Gene3D - 93 415 - -
Cpe05g00811 711 Gene3D Jelly Rolls 489 609 IPR014710 -
Cpe05g00811 711 ProSiteProfiles cAMP/cGMP binding motif profile. 491 588 IPR000595 -
Cpe05g00811 711 SMART cnmp_10 491 622 IPR000595 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g00811 Cpe-Chr5:5023238 Cpe18g00596 Cpe-Chr18:6342951 0 dispersed
Cpe14g00704 Cpe-Chr14:4622628 Cpe05g00811 Cpe-Chr5:5023238 1.61E-77 dispersed
Cpe16g00526 Cpe-Chr16:6198876 Cpe05g00811 Cpe-Chr5:5023238 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe05g00811 K05391 - csv:101210775 1303.5