Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe05g00821 | ATGGGCAAGGACGTTGAGGCAGCCGAGCAAGGCCAATTCCAAGCCAAGGACTACCAAGACCCACCTCCCGCTCCTTTCATCGACCCAGACGAGCTCACCAAATGGTCACTTTACAGAGCCGCCATCGCCGAGTTCATCGCCACTCTCCTCTTCCTCTACGTCACCGTTTTGACTGTTATCGGCTACTCCCACCAAAGTGACCCTAATATCTCCAAAGACCCATGTAACGGCGTCGGAATCCTCGGCATCGCCTGGGCCTTTGGCGGCATGATCTTCATCCTCGTCTACTGCACCGCCGGGATCTCCGGTGGCCACATAAACCCAGCAGTGACCTTTGGGCTGTTCTTGGCAAGGAAGGTGTCGTTGGTTAGGGCCGTGTTGTACATGGTAGCTCAGTGTGCGGGTGCTATCTGTGGCTGTGGGTTGGTTAAGGCTTTCCAGTCGGCGTACTACGTGAGGTATAATGGCGGCGCCAACATGCTCAGTGATGGGTACAACAAAGGCACTGGCTTGGGAGCTGAAATCATCGGTACCTTTGTTCTTGTCTACACCGTCTTCTCCGCCACCGATCCCAAAAGAAGCGCCAGAGATTCCCATGTTCCGGTTTTGGCGCCACTCCCAATTGGATTTGCAGTGTTCATGGTTCACTTAGCCACAATCCCCATCACCGGAACTGGAATTAACCCTGCAAGAAGCTTCGGAGCTGCTGTCATCTTCAACCATGAAAAAGCCTGGGATGATCAATGGATTTTCTGGGTTGGTCCATTCATTGGAGCTGCAATTGCTGCAATTTACCACCAGTATGTACTCAGAGCTGGCGCCATTAAAGCTCTTGGATCCTTCAGGAGCAACGCTTAA | 858 | 52.91 | MGKDVEAAEQGQFQAKDYQDPPPAPFIDPDELTKWSLYRAAIAEFIATLLFLYVTVLTVIGYSHQSDPNISKDPCNGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRAVLYMVAQCAGAICGCGLVKAFQSAYYVRYNGGANMLSDGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNHEKAWDDQWIFWVGPFIGAAIAAIYHQYVLRAGAIKALGSFRSNA | 285 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 5093243 | 5094932 | + | Cp4.1LG05g08140.1 | Cpe05g00821 | 470026 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe05g00821 | 285 | TIGRFAM | MIP: MIP family channel proteins | 43 | 265 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe05g00821 | 285 | Pfam | Major intrinsic protein | 31 | 266 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe05g00821 | 285 | Gene3D | Glycerol uptake facilitator protein. | 24 | 285 | IPR023271 | - | |
Cpe05g00821 | 285 | PRINTS | Major intrinsic protein family signature | 39 | 58 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe05g00821 | 285 | PRINTS | Major intrinsic protein family signature | 87 | 111 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe05g00821 | 285 | PRINTS | Major intrinsic protein family signature | 124 | 143 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe05g00821 | 285 | PRINTS | Major intrinsic protein family signature | 173 | 191 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe05g00821 | 285 | PRINTS | Major intrinsic protein family signature | 209 | 231 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe05g00821 | 285 | PRINTS | Major intrinsic protein family signature | 249 | 269 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe05g00821 | 285 | SUPERFAMILY | Aquaporin-like | 31 | 271 | IPR023271 | - | |
Cpe05g00821 | 285 | CDD | MIP | 39 | 269 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe05g00821 | 285 | ProSitePatterns | MIP family signature. | 105 | 113 | IPR022357 | - | |
Cpe05g00821 | 285 | PANTHER | AQUAPORIN OR AQUAGLYCEROPORIN RELATED | 1 | 285 | IPR034294 | - | |
Cpe05g00821 | 285 | PANTHER | AQUAPORIN PIP2-4-RELATED | 1 | 285 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe01g02241 | Cpe-Chr1:19049402 | Cpe05g00821 | Cpe-Chr5:5093243 | 1.80E-168 | dispersed | |
Cpe05g00821 | Cpe-Chr5:5093243 | Cpe10g00216 | Cpe-Chr10:1223766 | 2.83E-151 | dispersed | |
Cpe13g00804 | Cpe-Chr13:7202436 | Cpe05g00821 | Cpe-Chr5:5093243 | 5.48E-20 | dispersed | |
Cpe16g00536 | Cpe-Chr16:6270595 | Cpe05g00821 | Cpe-Chr5:5093243 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe05g00821 | K09872 | - | csv:101215300 | 535.798 |