Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe05g00848 ATGGAAGATTCCTCCAACTCAGGTGATGATCGGAAGAATACCCGTTTCTACCACCCTTACCAAGACCTACACGTTCCGATCACAAAGCTCTACGAGCTTCCCACCGCCCCCGAGCATCTTTTCTTCGAAGAGGCCGCCAGGCCCCACCGTTCTTGGGGCGAAAATCTCCAGTACTATACTGGAATTGGCTACCTCTCTGGCGCCCTTCTCGGCGGCGCCAGAGGCTCTATTCAGGGTCTCAGAGCGGCAGAGCCTGGCGACTCTGTCAAGCTCCGTCTCAATCGAGTTCTCAATTCTGGGGGCCAGCTCGGTCGGAGGGCTGGGAACTCTCTTGGGATTCTTGGCTTGATTTTTGCTGGTTTGGAAAGTGGGGTTATTCATTTGAGAGGTACTGATGATGTTTTGAACAGTATTGTCGCCGGATTGGGGACTGGTGCACTTTACAAGGCGGCTTCCGGGCCGAGGTCAGCCGCTATCGCCGGTGCCATTGGAGGGATTGCTGCTGCAGCTGCAGTTGCGGGAAAGCAGGCAGTTAAGAGATATGTGCCGATATAG 555 54.77 MEDSSNSGDDRKNTRFYHPYQDLHVPITKLYELPTAPEHLFFEEAARPHRSWGENLQYYTGIGYLSGALLGGARGSIQGLRAAEPGDSVKLRLNRVLNSGGQLGRRAGNSLGILGLIFAGLESGVIHLRGTDDVLNSIVAGLGTGALYKAASGPRSAAIAGAIGGIAAAAAVAGKQAVKRYVPI 184
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 5525959 5526513 - Cp4.1LG05g08470.1 Cpe05g00848 470053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe05g00848 184 Pfam Tim17/Tim22/Tim23/Pmp24 family 58 166 - -
Cpe05g00848 184 PANTHER TIM23 6 184 IPR045238 GO:0022857
Cpe05g00848 184 PANTHER MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM23-3 6 184 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g00848 Cpe-Chr5:5525959 Cpe12g00606 Cpe-Chr12:6042466 1.86E-70 dispersed
Cpe04g00023 Cpe-Chr4:212033 Cpe05g00848 Cpe-Chr5:5525959 8.46E-107 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe05g00848 K17794 - csv:101211511 303.908