Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe05g00871 ATGGAAGACTTTTTAGACAATATACCGCCTATGGATCTGATGCGTTCTGAGAAGATGACTTTTGTTCAGCTTATCATCCCTGTCGAGTCCGCTCATCGAGCCATTTCTTACCTTGGCGAGCTTGGCATCCTTCAATTTAAAGATTTAAACGAGGCCAAAAGTCCTTTCCAGAGAACCTTTGTTAACCAGGTAAAGCGATGTGCAGAGATGTCAAGGAAGCTGAGATTTTTCAAAGATCAAATCAGTAAAGCTGGTGTACTGGCATCTACTCGACCAATCCTTCAAGAACACATTGAGCTAGAGGAGTTAGAGATACGACTAGCCGATCATGAGCATGAACTGATTGAAATGAATTCCAACAGTGAGAAACTTCGACAGTCATATAATGAACTCTTAGAATTCAAGATGGTATTGCAAAAGGCAAGTGTATTTCTGGTGTCCAGTAATAGCCATTCAGTCTCAGAAGAAAGGGAGTTGAATGAAAATGTTTTCATGAATGATAACTATGTTGATGATGGATTACCACTTGAGGAAATGAGACCTGGACCGTCCAGTCAATCTGGTTTGAGATTTATTTGTGGTATTATTTGTAAATCCAAAGTTCTTAGATTTGAAAGGATGCTGTTTCGTGCAACAAGGGGCAATATGCTTTTCAATCAGGCACCAGCAGATATACAGATCATGGATCCCATATCGACGGAAATGGTTGAGAAAACAGTATTTGTAGTGTTTTTCTCTGGGGAGCAAGCCAGAAATAAAGTTCTGAAGATCTGTGAGGCTTTTGGAGCAAATTGCTATCCTGTTCCTGAAGATATAACCAAACAGAGGAAGATAACTAGAGAAGTTTCATCTCGCCTCATTGAACTTGAAGCCACTTTAGATGCTGGGATCCGTCACCGAAATGAGGCTCTTGCATCGATGGGGTTTCACTTGATTAAATGGATGAATATGGTAAGAAGGGAAAAGGCTGTATATGATACACTGAACATGTTGAATTTTGATGTCACTAAAAAATGTCTTGTTGGAGAAGGCTGGTGCCCAATCTTTGCAAAATCTCAGATTCAAGAGGCACTTCAACGAGCAACATTTGATAGCAGTTCACAAGTGGGCATAATATTTCATGTGATGGATACGGTTGAATCCCCTCCTACATATTTTAGAACAAACCTGATGTTTGGGGATTGGGGTCATGGAATATGCTTGTTGCTTGGAGCTTTATTTCTTATAGCTCGTGAGAGTAAGCTCAATAATCAGAAAATGTTGACTGAAAATTGTAAATTAGGAAGCTTTATGGAGATGCTATTTGGTGGACGCTATGTTCTTCTTTTGATGTCCCTCTTTTCAATTTATTGTGGGTTGATCTACAATGAGTTCTTCTCTGTTCCGTATCATATATTTGGTGCATCTGCTTACAAGTGTCGAGATAATTCATGCAGTGATGCACACACTGTTGGGTTAGTTAAATACCGTGATGCCTACCCGTTTGGTGTTGACCCGAGTTGGCGTGGAAGTCGTTCAGAACTTCCTTTTCTGAACTCTCTTAAAATGAAGTTGTCTATCTTGTTGGGTATTGCCCAAATGAACTTAGGGATCATATTGAGTTATTTTAACGCACGTTTTATTGGAAGCTCAATTGATATCAGGTACCAGTTTGTACCACAAGTGATCTTTCTTAACAGCCTTTTTGGATATCTTTCTCTTCTCATTGTCATCAAGTGGTGCACTGGATCTCAAGCTGACCTCTACCATGTGATGATTTACATGTTTTTGAGCCCATTTGATGATCTTGGAGAGAACGAATTGTTTTGGGGCCAAAGACCACTTCAAGTTATCTTGTTGATATTGGCTATAGTTGCAGTGCCTTGGATGCTTTTTCCTAAGCCCTTTATCTTGAAAAAGATTCATACAGAGAGATTTCAAGGTCGTACTTATGGGGTGCTTGGATCCTCTGAGGTAGATCTTGAGATGGAACCTAATTCGGCAAAGGAACACCAAGAGGATTTCAATTTTAGCGAGATCTTTGTTCACCAAATGATTCACTCCATAGAATTTGTCTTGGGTGCAGTTTCAAATACAGCATCATATCTTCGACTTTGGGCTTTAAGCTTGGCGCACTCAGAACTGTCAACAGTTTTCTATGAGAAAGTTCTTCTCCTAGCTTGGGGGTATGACAGCTTTGTCATCCGGATGATTGGTTTAGCTGTTTTCTCCTTTGCCACTGCTTTCATACTTCTTATGATGGAGACCCTTAGTGCCTTCCTTCATGCCTTGCGTCTTCATTGGGTTGAGTTTCAAAATAAATTCTACCATGGTGATGGCCACAAGTTCAAACCATTTTCCTTCGCCTCCAACGAGGATGAAGATTAA 2367 40.18 MEDFLDNIPPMDLMRSEKMTFVQLIIPVESAHRAISYLGELGILQFKDLNEAKSPFQRTFVNQVKRCAEMSRKLRFFKDQISKAGVLASTRPILQEHIELEELEIRLADHEHELIEMNSNSEKLRQSYNELLEFKMVLQKASVFLVSSNSHSVSEERELNENVFMNDNYVDDGLPLEEMRPGPSSQSGLRFICGIICKSKVLRFERMLFRATRGNMLFNQAPADIQIMDPISTEMVEKTVFVVFFSGEQARNKVLKICEAFGANCYPVPEDITKQRKITREVSSRLIELEATLDAGIRHRNEALASMGFHLIKWMNMVRREKAVYDTLNMLNFDVTKKCLVGEGWCPIFAKSQIQEALQRATFDSSSQVGIIFHVMDTVESPPTYFRTNLMFGDWGHGICLLLGALFLIARESKLNNQKMLTENCKLGSFMEMLFGGRYVLLLMSLFSIYCGLIYNEFFSVPYHIFGASAYKCRDNSCSDAHTVGLVKYRDAYPFGVDPSWRGSRSELPFLNSLKMKLSILLGIAQMNLGIILSYFNARFIGSSIDIRYQFVPQVIFLNSLFGYLSLLIVIKWCTGSQADLYHVMIYMFLSPFDDLGENELFWGQRPLQVILLILAIVAVPWMLFPKPFILKKIHTERFQGRTYGVLGSSEVDLEMEPNSAKEHQEDFNFSEIFVHQMIHSIEFVLGAVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGYDSFVIRMIGLAVFSFATAFILLMMETLSAFLHALRLHWVEFQNKFYHGDGHKFKPFSFASNEDED 788
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 5717217 5726358 + Cp4.1LG05g08670.1 Cpe05g00871 470076
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe05g00871 788 PIRSF ATP6V0A1 9 390 IPR026028 GO:0000220|GO:0046961
Cpe05g00871 788 PIRSF ATP6V0A1 389 788 IPR026028 GO:0000220|GO:0046961
Cpe05g00871 788 Pfam V-type ATPase 116kDa subunit family 390 781 IPR002490 GO:0033179|GO:0046961|GO:1902600
Cpe05g00871 788 Pfam V-type ATPase 116kDa subunit family 37 389 IPR002490 GO:0033179|GO:0046961|GO:1902600
Cpe05g00871 788 PANTHER VACUOLAR PROTON ATPASES 5 390 IPR002490 GO:0033179|GO:0046961|GO:1902600
Cpe05g00871 788 PANTHER VACUOLAR PROTON ATPASES 390 787 IPR002490 GO:0033179|GO:0046961|GO:1902600
Cpe05g00871 788 PANTHER VACUOLAR PROTON ATPASE A1 5 390 - -
Cpe05g00871 788 PANTHER VACUOLAR PROTON ATPASE A1 390 787 - -
Cpe05g00871 788 Coils Coil 93 127 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g00871 Cpe-Chr5:5717217 Cpe15g00555 Cpe-Chr15:6387031 0 dispersed
Cpe16g00562 Cpe-Chr16:6414568 Cpe05g00871 Cpe-Chr5:5717217 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe05g00871 K02154 - csv:101216514 1447.95