Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe05g00873 ATGTTGTATAGCTACAAACGTAGCTTTTCTGGGTTCTCCGCGAAGCTTAATGCAAGCCAAGCAATGACGTTATCGAAGATGGAAGGAGTGATATCCATATTCAAGAGTAAAACTATGGAGCTCCACACAACAAGAAGTTGGGACTTCTTGGGGCTTCCCATTCCTTCGTATAGCGGTAGTAGGACGTTTGATACACCACGTTCGAGTAAGCTGGCCGATGGCGACGACGTTGTTGTTGGCATCTTCGATTCAGGCATATGGCCTGAATCGGAAAGTTTCGAGGATGATCGGTGGATGTCCCCGGTTCCATGCAGCTGGAAGGGCAAATGCGTGAAAGCGTATAGATTCAACCCTTCATTAGCTTGCAATCGCAAGCTAATTGGCGCTCGTTACTATCTCAAAGGTTTCGAGGCCGAATACGGAGGACTCAACACAAGCGGGAACCCTGAGTTTGAATCGCCTCGAGACTTTTTGGGGCACGGAACTCATACAGCTTCAACGGCCGTGGGTGGAATTGTAGAGGACGTGAGCTTCACGGGGTCGTCACTCGGCAAAGGCATTGCTCGAGGAGGAGCGCCAAGAGCTAGGCTGGCTGTGTACAAGGTGTGCTGGGGAAAGGACTACGAAGGGAAGTGCACGGACGCAGACGTGATGGCTGCGTTTGACGACGCTTTATGCGACGGAGTCGACGTTATCTCGGCGTCGTTCGGAGGGTCGCCGCCGTTGGCTCCATTTTTTGAGTCTAGTAGTGCGATTGGGTCGTTCCATGGCATGCAGAAGGGAGTGAGTGTTGTGTTCTCAGCTGGTAACGATGGACCTTATCGTTCACTCGTTCAAAATGTGTCTCCGTGGAGCATTTGTGTTGCTGCTTCAACTATGGATCGAACCTTTCCCACTCAAATACTCATCCAAAACAGGATCTCTATTATGGGTGAGAGCTTGATCACTACAAACATAATTAACGCAAAACTAGCGAATGCGATCAACTATTTTATAGACGGAGTTTGCGAGCGGCGAAGTATAAGGAAAGGTAGGAAATCGGGGGCAGGGAAAGTGGTGGTTTGTTTCTCCACGGTAGGCCCAGTTTCGATGGGGGATGCACAAGAAGCTCTGGACGCCATCAATGCCTCGGCTTTGATATTTGGTGCCCCGCCCACGCTGCAGCTCCCTGACCTTGATCTCCTCCCCACCGTTCGAATTGACATTACTCACGCAACTCAAATTAGAAACTTTCTTGCTGAACTGCCCAGGCTGCCAGTAGTAGAGATCAGGGCTGCAAGAAGCGTGATTGGGAAGTCGGTGGCTCCGAGTGTGGCATACTTCTCGTCTAGAGGACCGAGCTCACTTTCGCCTGACATTCTTAAGCCAGACATAAGTGCCCCAGGAGTGAACATATTGGCGGCATGGCCTCCAGAAACTGCTCCAACAGTGCGGCCAACATCGACAGAAGGAGAAAGCCAAAGGCAAGTCAAATGGAATTTCCAATCAGGGACTTCAATGTCATGCCCTCACATCTCTGGAGTCGTTGCCCTCATCAAATCTCTGCATCCAAGCTGGTCTCCTGCAGCCATTAGATCTGCCCTCATCACCACAGCCACCAAGAGAGACTCCACTCGCAACACCATCCTAGCAGGTGGATCCACGAAACCATCCGATCCATTCGACATTGGAGGTGGCCAAGTGAACCCATTGAAGGCAGTAAATCCAGGACTAGTGTACGACATGACAGCCAATGATTACATTATTTTTCTCTGCAATATTGGGTACACAGAGCAGCAAATCAGGATGATTGTGAACCCTTCTCCACAAACACTTGTTTGTTGTCCACCATTTCTATCCACCTCCATTGCCAATCTCAATTACCCTTCCATTACACTTGCAAACCTCAAATCCACAACCACAATCAAAAGGACTGTTCGTAATGTAGCAGAAAACAAAAATGCCATCTACTTTCTTAAGCTGAATCCTCCCAATGGAGTGCAAGTATTGGTATGGCCTCGGATTCTTCTTTTCTCTTGGTTTAGGCAGCACGTTTCTTACTACATCACCATAACCCCGCTCAAGAAAGCTCGTGGGAGGTATGATTTTGGGGAGATTGAATGGTCAGATGGGTTCCATAGGGTCACAAGTCCTCTGGTTGTTCGTGTTAGCAGCGCTAGCTAG 2163 49.28 MLYSYKRSFSGFSAKLNASQAMTLSKMEGVISIFKSKTMELHTTRSWDFLGLPIPSYSGSRTFDTPRSSKLADGDDVVVGIFDSGIWPESESFEDDRWMSPVPCSWKGKCVKAYRFNPSLACNRKLIGARYYLKGFEAEYGGLNTSGNPEFESPRDFLGHGTHTASTAVGGIVEDVSFTGSSLGKGIARGGAPRARLAVYKVCWGKDYEGKCTDADVMAAFDDALCDGVDVISASFGGSPPLAPFFESSSAIGSFHGMQKGVSVVFSAGNDGPYRSLVQNVSPWSICVAASTMDRTFPTQILIQNRISIMGESLITTNIINAKLANAINYFIDGVCERRSIRKGRKSGAGKVVVCFSTVGPVSMGDAQEALDAINASALIFGAPPTLQLPDLDLLPTVRIDITHATQIRNFLAELPRLPVVEIRAARSVIGKSVAPSVAYFSSRGPSSLSPDILKPDISAPGVNILAAWPPETAPTVRPTSTEGESQRQVKWNFQSGTSMSCPHISGVVALIKSLHPSWSPAAIRSALITTATKRDSTRNTILAGGSTKPSDPFDIGGGQVNPLKAVNPGLVYDMTANDYIIFLCNIGYTEQQIRMIVNPSPQTLVCCPPFLSTSIANLNYPSITLANLKSTTTIKRTVRNVAENKNAIYFLKLNPPNGVQVLVWPRILLFSWFRQHVSYYITITPLKKARGRYDFGEIEWSDGFHRVTSPLVVRVSSAS 720
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 5735179 5738761 - Cp4.1LG05g08730.1 Cpe05g00873 470078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe05g00873 720 PANTHER SUBTILISIN-LIKE PROTEASE SBT3.18 1 711 - -
Cpe05g00873 720 Gene3D Peptidase S8/S53 domain 76 580 IPR036852 GO:0004252|GO:0006508
Cpe05g00873 720 SUPERFAMILY Subtilisin-like 42 571 IPR036852 GO:0004252|GO:0006508
Cpe05g00873 720 PRINTS Subtilisin serine protease family (S8) signature 156 169 IPR015500 -
Cpe05g00873 720 PRINTS Subtilisin serine protease family (S8) signature 496 512 IPR015500 -
Cpe05g00873 720 PRINTS Subtilisin serine protease family (S8) signature 74 93 IPR015500 -
Cpe05g00873 720 Pfam Subtilase family 74 537 IPR000209 GO:0006508|GO:0008236
Cpe05g00873 720 Gene3D - 294 430 - -
Cpe05g00873 720 ProSiteProfiles Serine proteases, subtilase domain profile. 46 567 - -
Cpe05g00873 720 Pfam Peptidase inhibitor I9 1 42 IPR010259 -
Cpe05g00873 720 Gene3D - 584 717 - -
Cpe05g00873 720 Pfam Fibronectin type-III domain 618 714 IPR041469 -
Cpe05g00873 720 CDD Peptidases_S8_3 40 533 IPR034197 -
Cpe05g00873 720 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 42 IPR037045 -
Cpe05g00873 720 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 711 IPR045051 -
Cpe05g00873 720 ProSitePatterns Serine proteases, subtilase family, serine active site. 497 507 IPR023828 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g00873 Cpe-Chr5:5735179 Cpe14g00017 Cpe-Chr14:98846 2.14E-158 dispersed
Cpe05g00873 Cpe-Chr5:5735179 Cpe17g00453 Cpe-Chr17:3377017 6.91E-158 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe05g00873 - - bhj:120083115 1086.25