Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe05g00913 ATGGCTCATTCTTCTCTTCCAATCTTCGTCGATCTGCCGAATTGGCCACCGTCAAATCAGCCACAAGGAAATGATCAGCATCAACTTCCGGCGTTCATGCTGCCTCCTCAGCCAACGGCGGCTCGTGGCAGCGGAGCCCGACCGGGTTCTATGGCGTACCGAGCAAGGTTGGCGATGGTACCGCAGCCGGAGATGGCACTAAAATGCCCACGTTGTGATTCTACAAACACCAAATTCTGTTATTTCAATAATTACAGCCTTACTCAGCCGAGACACTTTTGTAAAACCTGCCGGCGGTACTGGACCCGTGGCGGCGCTCTTAGAAATGTGCCCGTCGGTGGAGGGTTTCGTAAGAACAACAAGAAGAAGAAGAAATCTAACCGATCTAAGTCTCCAATTGCTACTCAAATTGAAATGGGAAATTCAAGAACAATTGAGAGCCATTTCCCATCACAATCTTTTCAATTACCTTCAATTCCATCTCTCTCTCGCTTTGGAGCAAACAACTCAGCCCTAAACTTCGCCGGAATTCACATCGGAAACACAAATTCCGGCAGGGAATTGGAGCAATGGCAGCGTTCTCAGCAACAACTGCCGTTCATCATCGCCGGACTCGAACCACCGACTCCCGCCACTGCTTACCCACAAAACCTTCAAACCGAAGTCGACAACTTTGGTTGCCACCAACAAGTTCAGAATTCGACACCCTTTTTTAGGATTCCGATGAAAAACAAAGAACAAGAACAAGAACAAGAACAAGGAATTTTATCGAACTTCTTACGACCAGCGGATCAAAACAGCCACTTTTGGGGATGTGATCATCAAAATTCATGGACGGATTTATCAGCTATCAGTTCATCTTCAAGCAGCCATCTTTTGTAA 882 47.05 MAHSSLPIFVDLPNWPPSNQPQGNDQHQLPAFMLPPQPTAARGSGARPGSMAYRARLAMVPQPEMALKCPRCDSTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGFRKNNKKKKKSNRSKSPIATQIEMGNSRTIESHFPSQSFQLPSIPSLSRFGANNSALNFAGIHIGNTNSGRELEQWQRSQQQLPFIIAGLEPPTPATAYPQNLQTEVDNFGCHQQVQNSTPFFRIPMKNKEQEQEQEQGILSNFLRPADQNSHFWGCDHQNSWTDLSAISSSSSSHLL 293
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 6006866 6008272 + Cp4.1LG05g09090.1 Cpe05g00913 470118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe05g00913 293 ProSitePatterns Zinc finger Dof-type signature. 69 105 IPR003851 GO:0003677|GO:0006355
Cpe05g00913 293 Pfam Dof domain, zinc finger 66 121 IPR003851 GO:0003677|GO:0006355
Cpe05g00913 293 ProSiteProfiles Zinc finger Dof-type profile. 67 121 IPR003851 GO:0003677|GO:0006355
Cpe05g00913 293 MobiDBLite consensus disorder prediction 112 131 - -
Cpe05g00913 293 PANTHER DOF DOMAIN ZINC FINGER PROTEIN 27 289 - -
Cpe05g00913 293 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 27 289 IPR045174 GO:0003700|GO:0006355
Cpe05g00913 293 MobiDBLite consensus disorder prediction 12 48 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe05g00913 Cpe20g00813 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g02293 Cpe-Chr1:19379956 Cpe05g00913 Cpe-Chr5:6006866 4.93E-50 wgd
Cpe01g01095 Cpe-Chr1:6475077 Cpe05g00913 Cpe-Chr5:6006866 8.01E-46 wgd
Cpe01g00186 Cpe-Chr1:1055284 Cpe05g00913 Cpe-Chr5:6006866 7.85E-40 wgd
Cpe10g00881 Cpe-Chr10:4961166 Cpe05g00913 Cpe-Chr5:6006866 1.31E-45 wgd
Cpe13g00850 Cpe-Chr13:7470504 Cpe05g00913 Cpe-Chr5:6006866 9.93E-48 wgd
Cpe16g00602 Cpe-Chr16:6669904 Cpe05g00913 Cpe-Chr5:6006866 7.61E-120 wgd
Cpe02g01240 Cpe-Chr2:11148513 Cpe05g00913 Cpe-Chr5:6006866 1.43E-47 wgd
Cpe20g00813 Cpe-Chr20:7378828 Cpe05g00913 Cpe-Chr5:6006866 5.40E-46 wgd
Cpe03g00124 Cpe-Chr3:627920 Cpe05g00913 Cpe-Chr5:6006866 7.46E-38 wgd
Cpe05g00913 Cpe-Chr5:6006866 Cpe08g01160 Cpe-Chr8:8615889 1.64E-43 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
49548 PF02701 zf-Dof 4.30E-32 No_clan Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe05g00913 - - cpep:111794468 585.104