Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe05g00928 ATGGATCCAAACCTCAACGGTTTTCCAGATCATGAAGCAGATTATAACTCTGATTATCAGGCCCTCTTAATCCAATTACATGATCTCCCCAATCGTTCGATTGATGGGTTTAGACTAAATGATTGGCCTTCTTTACCCACTTCATATCCATACCCTGAATTCAATAACCCATCTCCAGATCATGTTCCCTTCATCCAGAATTCCCTTTTCCCGAGCGACCCAGACCCTAATCAGTTTTCTTCGCCGTCAAGTGAGAGGGCGAAAGGGGAGCCACGTTCTGGGTCGGTGGGGTTGAACTCAGATGGAGGTGCAAAAGGGGTGGCTTTGGGGTTAAGCCCTGGTGGTGACTCTTCCTCAGATGAGAGTGACTTCAAGGAAACCGTTCTCAAGTACATAAGCCAAATGCTTATGGAAGAGAATTTGGAGGAGATGCCCTGCATGTTTTATGATCCTATGGGACTTAAAGTTACTGAGAAATCGTTCTATGACGCTCTTAGTCAGAACTACCCTCCTTCACCTAACCAACCTCCTCTGGATTGCGAGAGCTCTGAGGATCAATGGGCTGTTGATCCTGTAGAACATACGCCCCCTGTACTTCGAAGACCTTTTCCCAGTAATGAGTATCAGTCGAATTTTGAGGTTACTTCTGGCAATCAAAGCAACCTGATTACTAATAGTCATGAGTTCGTCACTGAGCTGTTGGCTCAGAATATCTTTAGTGATAGCACATCCATCTTGCAATATCAAAAAGGGTTGGAGGAGGCAAGGAAGTTTCTTCCAGGAGGTGAACAGCTGAATATTGAACTTGGCAGCAAGATATTGACAGGAGTAGCTTCTAAGGTAATGGATACAACAGAGAAGGTGAAAAGGGAAAATTCACCGAATGGATCGAAGGGACGGAAGAATCGGGAACGTGAAGATGTAGACTTAGATTCAGAAGAAGGGAGGAGAAACAAGCATGCCACCATTTATGGGGATGAGGAAGAATTATCTGAGATGTTTGATAAGGTTTTACTTCATGATTATGGAGGAAATGAGACCTCTGCAAATGGGAAATTGCAGTATAATGGACAACTTCATGGATCTATTGCTGGGAAAGCTCGGGAAAAGAAACAGGAGAAGAGAAAAGACTCAGTGGATTTGAGAAATCTTCTGATATTATGTGCACAAGCTGTGTCTTCTGATGATCGTAGGATTGCTAATGAACTACTTAAGCAGATTAGGCAGCATTCTACAACCAATGGGGATGGTTTCCAAAGAATGGCTCATTTTTTTGCCAACGCTCTTGAGGCTCGCATGGTTGGCACTGGTACAGGAAGCAGAATCCACTATGAATCACTAATTCAAAGCAAGATTTCAGCAGCTGATATGTTAAAAGCTTACCAAGCACACTTATCATCCTGCCCTTTTAAGAAACTCTCGCTTTTTTTCATGGTTAAAATGATTTTGAAGGTTGCTGATAAGGCCAAAAGTCTTCATATTATTGATTTTGGCATTTGCTATGGCTTCCTCTGGCCAATGTTAATTCAGTTTCTTCCACAATTACCTGATGGTCCACCTAAACTACGCATTACTGGTATTGATCACCCTCTACCAGGATTTCGTCCAGCCGAAAAGATTGATGAGTCAGGACGTCGTTTGGCAAAATACTGCAAACGCTTTAACGTTCCTTTTCAATATCAAGCCATAGCATCAGATAACTGGGAAACTATCCGAATCGAGGACTTCAAGCTCGATAGCAGTGATGTGCTAGTTGTGAACTGTTTCTACAGGTTTAACAACCTACTCGACGAAACTGTCGAAGAAACTAGTCCAAGGGATATTGTTCTACGTCTAGTAAGGGAGATGAATCCAAACCTATTTGTACATTCTATCACTAATGGATCCTATCATGCACCGTTCTTCATAACGCGCTTTCGAGAGGCACTCTTCCACTTCTCTGCACTGTATGATTCCTTAGACGTTAATTTACCTCGTGAAAGTGAAGAGAGGATGATGATAGAAAGAGAGTCTCTCGGGCGCCAAATCATGAACGTAGTAGCATGTGAGGGGGCTCAGAGGGTTGAGAGGCCTGAAACCTATAAGCAATGGCAGGTTCGGTGTATTAGGGCGGGTTTCAGGCAGCTTCCTTTGGACAAGGAGATGATGAACAAGTTTAGGAGCAAGTTAACAACCCATTACCACAAAGATTTTGTACTGGATGAAGACAATGGCTGGATACTTCAAGGGTGGAAAGGCCGTATTGTCTATGCTTCTTGTTGTTGGGTGCCAGCATCATAG 2280 43.29 MDPNLNGFPDHEADYNSDYQALLIQLHDLPNRSIDGFRLNDWPSLPTSYPYPEFNNPSPDHVPFIQNSLFPSDPDPNQFSSPSSERAKGEPRSGSVGLNSDGGAKGVALGLSPGGDSSSDESDFKETVLKYISQMLMEENLEEMPCMFYDPMGLKVTEKSFYDALSQNYPPSPNQPPLDCESSEDQWAVDPVEHTPPVLRRPFPSNEYQSNFEVTSGNQSNLITNSHEFVTELLAQNIFSDSTSILQYQKGLEEARKFLPGGEQLNIELGSKILTGVASKVMDTTEKVKRENSPNGSKGRKNREREDVDLDSEEGRRNKHATIYGDEEELSEMFDKVLLHDYGGNETSANGKLQYNGQLHGSIAGKAREKKQEKRKDSVDLRNLLILCAQAVSSDDRRIANELLKQIRQHSTTNGDGFQRMAHFFANALEARMVGTGTGSRIHYESLIQSKISAADMLKAYQAHLSSCPFKKLSLFFMVKMILKVADKAKSLHIIDFGICYGFLWPMLIQFLPQLPDGPPKLRITGIDHPLPGFRPAEKIDESGRRLAKYCKRFNVPFQYQAIASDNWETIRIEDFKLDSSDVLVVNCFYRFNNLLDETVEETSPRDIVLRLVREMNPNLFVHSITNGSYHAPFFITRFREALFHFSALYDSLDVNLPRESEERMMIERESLGRQIMNVVACEGAQRVERPETYKQWQVRCIRAGFRQLPLDKEMMNKFRSKLTTHYHKDFVLDEDNGWILQGWKGRIVYASCCWVPAS 759
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 6099157 6101436 + Cp4.1LG05g09270.1 Cpe05g00928 470133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe05g00928 759 PANTHER SCARECROW-LIKE PROTEIN 34 91 757 - -
Cpe05g00928 759 Pfam GRAS domain family 381 755 IPR005202 -
Cpe05g00928 759 MobiDBLite consensus disorder prediction 60 88 - -
Cpe05g00928 759 MobiDBLite consensus disorder prediction 284 318 - -
Cpe05g00928 759 ProSiteProfiles GRAS family profile. 372 756 IPR005202 -
Cpe05g00928 759 MobiDBLite consensus disorder prediction 50 123 - -
Cpe05g00928 759 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 91 757 IPR005202 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe05g00928 Cpe20g00829 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g00928 Cpe-Chr5:6099157 Cpe02g00884 Cpe-Chr2:6289824 3.19E-65 dispersed
Cpe16g00623 Cpe-Chr16:6751531 Cpe05g00928 Cpe-Chr5:6099157 0 wgd
Cpe02g01222 Cpe-Chr2:11052449 Cpe05g00928 Cpe-Chr5:6099157 0 wgd
Cpe20g00829 Cpe-Chr20:7491328 Cpe05g00928 Cpe-Chr5:6099157 2.80E-121 wgd
Cpe03g00113 Cpe-Chr3:570245 Cpe05g00928 Cpe-Chr5:6099157 0 wgd
Cpe05g00928 Cpe-Chr5:6099157 Cpe08g01167 Cpe-Chr8:8658812 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
49549 PF03514 GRAS 6.60E-104 CL0063 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe05g00928 - - mcha:111017073 1184.47