Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe05g00949 ATGAATCTGTATTTCCGTTTAACCTATTCGTCGGGAAGCTTCGGGAGGAACTCGTCGCCTTTGAAGTCTTATGGATCGTATGCTTCGTACGGTTCGTCGTCTACCTTTCCCAGCGATTTTTTCGCATCTGCAGGATTCTCGATTGACGTAATTTACAAGGCGACGGATAATTTCTCTGCTGCGAATGTAGTTGGAGCTGGAGCATTTGGAACGGTGTATAAAGGGAAGCTCAAAGACGGATCTCTTGTTGCCGTAAAGCGAGCCAGAAGGAATGCGCACGAGAAGCGTTTGCTGGCAGAGTTCAGGAATGAGATACAAACTTTGTCAAGGATCGAACATTTGAATTTGGTTCGTTTGTATGGCTATCTGGAGCAAGGAGATGAGAGGATTATTATTTTTGAATTTGTTGGTAATGGAAATCTGCGGGAGCATCTCGATGGCAAGCGAGGAGTCGTGCTCGAGATTGCAGAGCGTCTGGACATTGCCATTGATGTTGCTCATGCTATCACCTATCTTCACATGTACAACGATGCGCCAATAATCCATAGAGATATAAAGGCTACAAACATCCTAATCACCGAGAAACTACGAGCAAAAGTGGCCGATTTCGGGTTTGCACGCCTTGTTGCAGAAGATTCTAATGCTACGCATGTCTCGACCCAAGTTAAAGGAACAGCTGGATACTTGGATCCTGCATATTTAAGGACTTATCAGCTCACTGAGAAGAGTGATGTATACTCCTTCGGTGTGTTGCTGGTAGAGCTCATGACAGGAAGACGCCCAATTGAATCAAAAAGGGATGTCAAACAAAGAGTAACCATAAGATGGGCAATGCAGAAGCTGAATGAAGGAGAAGCTGTGGTTGCCATGGATCCCAGGCTGAGAAGGACTTCTGCATCCACACGGACCACAGAGAATATGCTCAAATTGGCTCGCCGATGCCTCGATCCATCGAGACCGTCACGACCATCCATGAAAACTATTGGAGAGGAGTTATGGGGAATCCGAAAGGAATATCGAGATAGGTTACTATCGTCTTCTTGCTCGGAGTCTGTTCGTTCAGCAGAATTTCCCGTTCGAAATGCAAGAGATAACCTTTATGTTTCTTTAGGCATTAAAGATGACAAAGATTTGTACAGCAAATTTGTTTCTGCATAA 1158 44.91 MNLYFRLTYSSGSFGRNSSPLKSYGSYASYGSSSTFPSDFFASAGFSIDVIYKATDNFSAANVVGAGAFGTVYKGKLKDGSLVAVKRARRNAHEKRLLAEFRNEIQTLSRIEHLNLVRLYGYLEQGDERIIIFEFVGNGNLREHLDGKRGVVLEIAERLDIAIDVAHAITYLHMYNDAPIIHRDIKATNILITEKLRAKVADFGFARLVAEDSNATHVSTQVKGTAGYLDPAYLRTYQLTEKSDVYSFGVLLVELMTGRRPIESKRDVKQRVTIRWAMQKLNEGEAVVAMDPRLRRTSASTRTTENMLKLARRCLDPSRPSRPSMKTIGEELWGIRKEYRDRLLSSSCSESVRSAEFPVRNARDNLYVSLGIKDDKDLYSKFVSA 385
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 6209029 6211871 - Cp4.1LG05g09620.1 Cpe05g00949 470154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe05g00949 385 Gene3D Phosphorylase Kinase; domain 1 31 135 - -
Cpe05g00949 385 ProSiteProfiles Protein kinase domain profile. 58 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe05g00949 385 PANTHER RECEPTOR-LIKE PROTEIN 55 21 357 - -
Cpe05g00949 385 SMART serkin_6 58 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe05g00949 385 SUPERFAMILY Protein kinase-like (PK-like) 33 335 IPR011009 -
Cpe05g00949 385 Pfam Protein kinase domain 61 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe05g00949 385 ProSitePatterns Serine/Threonine protein kinases active-site signature. 180 192 IPR008271 GO:0004672|GO:0006468
Cpe05g00949 385 PANTHER CALMODULIN-BINDING RECEPTOR-LIKE CYTOPLASMIC KINASE 1 21 357 - -
Cpe05g00949 385 ProSitePatterns Protein kinases ATP-binding region signature. 64 86 IPR017441 GO:0005524
Cpe05g00949 385 CDD STKc_IRAK 64 332 - -
Cpe05g00949 385 Gene3D Transferase(Phosphotransferase) domain 1 136 353 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe05g00949 Cpe11g00973 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g01739 Cpe-Chr3:13178290 Cpe05g00949 Cpe-Chr5:6209029 3.57E-11 dispersed
Cpe04g01207 Cpe-Chr4:10222366 Cpe05g00949 Cpe-Chr5:6209029 8.20E-100 dispersed
Cpe05g00949 Cpe-Chr5:6209029 Cpe08g00542 Cpe-Chr8:3538313 9.93E-12 dispersed
Cpe16g00644 Cpe-Chr16:6859228 Cpe05g00949 Cpe-Chr5:6209029 0 wgd
Cpe19g00335 Cpe-Chr19:2960450 Cpe05g00949 Cpe-Chr5:6209029 6.03E-65 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62426 PF00069 Pkinase 3.00E-52 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe05g00949 - - bhj:120088467 618.231