Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe05g00976 ATGGCCGTCGCCGCCTGCTCCACCGACTTCACCCGCGACTCCGCCTGTCGCAACGGCCACGCCGCCGCCCACCTCAAGTTCATTTCCATCTTCCTCATCTTCTTCACCAGCGTCATCGGCGTCTCCTTACCAGTCCTCCTCACCCGTTTCTTCCACGGAAAACCCCTTTACGACAAAGCGATTCTAATCATCAAGTGCTTCGCCGCCGGTGTGATTCTCTCCACCTCACTCGTCCACGTCCTCCCCGACGCCTTCGACGCTCTCTCCGACTGCCAAGTGGCTTCCCAACACCCATGGCGGGATTTCCCCTTCTGCGGTTTGGTCACCATGATCGGCGCACTGCTGGCGCTTCTCGTCGACGTCACCGCCACGTCGCACGTCGAGCACAGCCACTACAATCCGGTGGAGACAGAGGAGAAACCGAGAACCGACTCTGCAGGGGATATTGGGTTGCTGGTGTCGGTGGATTCGAAATCGGAGATGGGGAATTTAGGGGGAGGGAGTTGTCACCGGCGGCGAGAAGGGGAAGAGGAATTGGTGAAATTGAAGCAGAAACTTGTGTCTCAAGTTCTTGAAATTGGGATTATTTTCCACTCTGTAATCATCGGAGTTACAATGGGAATGTCCCAAAATCAGTGCACAATCAAGCCTCTGGTTGCTGCTCTTTCATTTCATCAAATCTTTGAAGGAATGGGCCTCGGCGGCTGTATTGCTCAGGCAGGATTCAGCTTCACAACGACATCGTATATGTGTTTCATGTTCTCAGTAACAACGCCAATGGGGATAGTATTAGGGATGGTGCTGTTTTCAATAACAGGGTACGACGACAGCAGCCCCAAGGCGTTGATCATGGAGGGATTATTGGGTTCATTTTCGTCGGGGATTCTGATATACATGGCTCTGGTTGATCTAATAGCAGTTGATTTTTTCCACAACAAGATGATGAGCTCAAATCAAGGGCTGAAGAGGGGTTGTTTTGTGGCGTTGTTGCTGGGGTCGGCGTCCATGTCGGTGTTAGCTTTGTGGGCGTGA 1032 52.71 MAVAACSTDFTRDSACRNGHAAAHLKFISIFLIFFTSVIGVSLPVLLTRFFHGKPLYDKAILIIKCFAAGVILSTSLVHVLPDAFDALSDCQVASQHPWRDFPFCGLVTMIGALLALLVDVTATSHVEHSHYNPVETEEKPRTDSAGDIGLLVSVDSKSEMGNLGGGSCHRRREGEEELVKLKQKLVSQVLEIGIIFHSVIIGVTMGMSQNQCTIKPLVAALSFHQIFEGMGLGGCIAQAGFSFTTTSYMCFMFSVTTPMGIVLGMVLFSITGYDDSSPKALIMEGLLGSFSSGILIYMALVDLIAVDFFHNKMMSSNQGLKRGCFVALLLGSASMSVLALWA 343
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 6364201 6365980 - Cp4.1LG05g09730.1 Cpe05g00976 470181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe05g00976 343 PANTHER ZINC/IRON TRANSPORTER 5 343 - -
Cpe05g00976 343 TIGRFAM zip: ZIP zinc/iron transport family 12 343 IPR004698 GO:0005385|GO:0016021|GO:0071577
Cpe05g00976 343 Pfam ZIP Zinc transporter 24 340 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Cpe05g00976 343 PANTHER ZINC TRANSPORTER 6, CHLOROPLASTIC 5 343 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g00976 Cpe-Chr5:6364201 Cpe06g00552 Cpe-Chr6:3318109 1.73E-80 dispersed
Cpe05g00976 Cpe-Chr5:6364201 Cpe09g00693 Cpe-Chr9:6137273 1.21E-81 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe05g00976 K14709 - csv:101214729 538.11