Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe05g00998 ATGCCGGAGATCGAACCCTACTCCGCCGGCAATAATGCCCTGTTTGGCAAGTACGAGCTCGGCAAGCTCCTCGGCTGCGGCGCCTTTGCCAAGGTCTACCATGCCCGCGACCTTCGCTCCGGCCAGAGCGTCGCCGTCAAAGTCATCAATAAGAAGAAGATCTATGGCACAACGCTAATGTCTAACATCAAGCGGGAGATCGACATCATGCGCCGTCTCCGCCATCCACACATCGTCAAACTCCATGAGGTTCTCGCTACCAAATCCAAGATCTACTTTGTTATGGAATTCGTCAAAGGAGGCGAGCTCTTTGCCAAGGTTGCTAAGGGCCGATTCAGCGAGGATTTGAGCAGGAAATTCTTCCAGCAATTGATTTCTGCTGTCGGATTTTGTCACGCGCGTGGGATCTACCACCGCGATCTGAAGCCGGAGAATCTCCTCGTCGACGAGAATGGAAATCTCAAGGTCTCGGACTTCGGTCTCAGTGCGTTAACGGACCAGATCCGTTCCGATGGCCTTTTGCACACACTCTGTGGAACTCCGGCGTATGTCGCGCCGGAGATCTTGTCGAAGAAAGGCTACGACGGTGCGAAAGTCGATGTGTGGTCCTGTGGTGTGATTCTTTTCGTGTTGAGTGCTGGTTACCTTCCGTTCAATGATCCGAATCTTATGGCCATGTACAAGAAGATTTACAAGGGGGAATATCGGTGCCCTAAATGGATGTCGCCGGACCTCAAGAGATTTCTATCGCGACTTCTGGATACAAATCCTCAAACGAGAATCACCGTCGATGAGATTCTCAGCGATCCGTGGTTCAAAAAAGGACCAATTAAGGAGATCAATTTCTACGATGATTACGAGGTGAAATATGAAGAGAAAGACGAATCTGAATCGATGAATTTGAACGCATTCGACCTAATATCATTCTCATCTGGATTAGATCTATCCGGTTTGTTCGACAATTCGCACAACATAGAGGCGGACAGTGAGCGATTCGTATCAGCAGAGTCTCCAGAGAAGATCGTGGAGAAAATCGAAGAACTCGCTAGGGCAGAGAATTTGAAGGTGAAGAAACAAAAGGAATTTGGAGTTGAATTGGATGGGCAGAATCGTAATTTATCAATCGGAATCGAAATTTTCCGGTTAACCGACGGATTGGTAGTGGTGGAGGCGAGAAGAAGAAGTGGAGATGCAGAATCGTGTAAGGAATTGTTGAAGAAGAAGCTCAAATGTCACCTCACCGGCAACGAAGCGTCGACGTCAACATCACAACAAGATTCCGGCGACCAAAACCAGTGA 1299 48.65 MPEIEPYSAGNNALFGKYELGKLLGCGAFAKVYHARDLRSGQSVAVKVINKKKIYGTTLMSNIKREIDIMRRLRHPHIVKLHEVLATKSKIYFVMEFVKGGELFAKVAKGRFSEDLSRKFFQQLISAVGFCHARGIYHRDLKPENLLVDENGNLKVSDFGLSALTDQIRSDGLLHTLCGTPAYVAPEILSKKGYDGAKVDVWSCGVILFVLSAGYLPFNDPNLMAMYKKIYKGEYRCPKWMSPDLKRFLSRLLDTNPQTRITVDEILSDPWFKKGPIKEINFYDDYEVKYEEKDESESMNLNAFDLISFSSGLDLSGLFDNSHNIEADSERFVSAESPEKIVEKIEELARAENLKVKKQKEFGVELDGQNRNLSIGIEIFRLTDGLVVVEARRRSGDAESCKELLKKKLKCHLTGNEASTSTSQQDSGDQNQ 432
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 6530352 6531650 - Cp4.1LG05g10010.1 Cpe05g00998 470203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe05g00998 432 Gene3D Phosphorylase Kinase; domain 1 15 99 - -
Cpe05g00998 432 SMART serkin_6 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe05g00998 432 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 14 8 422 - -
Cpe05g00998 432 SUPERFAMILY Protein kinase-like (PK-like) 15 281 IPR011009 -
Cpe05g00998 432 ProSiteProfiles Protein kinase domain profile. 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe05g00998 432 PANTHER - 8 422 - -
Cpe05g00998 432 ProSiteProfiles NAF domain profile. 296 320 IPR018451 GO:0007165
Cpe05g00998 432 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Cpe05g00998 432 Gene3D Kinase associated domain 1, KA1 297 415 - -
Cpe05g00998 432 Gene3D Transferase(Phosphotransferase) domain 1 100 276 - -
Cpe05g00998 432 Pfam Protein kinase domain 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe05g00998 432 Coils Coil 341 361 - -
Cpe05g00998 432 CDD CIPK_C 302 399 - -
Cpe05g00998 432 Pfam NAF domain 300 358 IPR004041 GO:0007165
Cpe05g00998 432 ProSitePatterns Protein kinases ATP-binding region signature. 24 47 IPR017441 GO:0005524
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe05g00998 Cpe16g00684 CCT
Cpe05g00998 Cpe16g00684 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g00092 Cpe-Chr3:476230 Cpe05g00998 Cpe-Chr5:6530352 2.24E-48 dispersed
Cpe03g01482 Cpe-Chr3:11725168 Cpe05g00998 Cpe-Chr5:6530352 2.82E-124 dispersed
Cpe05g00998 Cpe-Chr5:6530352 Cpe19g00148 Cpe-Chr19:1180440 0 dispersed
Cpe06g00982 Cpe-Chr6:9841838 Cpe05g00998 Cpe-Chr5:6530352 4.90E-12 dispersed
Cpe10g00995 Cpe-Chr10:5660936 Cpe05g00998 Cpe-Chr5:6530352 0 wgd
Cpe16g00684 Cpe-Chr16:7092122 Cpe05g00998 Cpe-Chr5:6530352 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62430 PF00069 Pkinase 1.90E-72 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe05g00998 - K12761 csv:101204001 701.049