Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe05g01001 | ATGTTCAAGAATTCCAAATCGGAATATGGGTATGTTGAGACCGATCCGACTAGTCGTTACGGCCGTTTTGAAGAAGTGTTGGGAAAAGGGGCCATGAAGACAGTGTATAAAGCCATTGATGAGTTTCTAGGGATAGAGGTGGCGTGGAGTCGGGTGAAACTCAACGAGGTTCTCCGATCACCGGAGGATTTGCAGCGGTTGTATTCCGAGGTTCACTTACTTAGCACGCTTAAGCATGAATCCATCATGCAGTTCTACACTTCATGGATTGATGTTGATCACAAAACCTTTAACTTTATTACCGAACTCTTTACTTCTGGAACGCTTAGAGAATATGGGAAGAGATATAGCCAAGTTGATATTAGAGCTATTAAGAGCTGGGCGCGCCAGATCCTGTTGGGGCTCGTTTATTTGCACGAGCACGATCCTCCGATAATACACCGAGATTTGAAGTGTGACAATATCTTTGTCAATGGTCATCTTGGGCAAGTCAAGATTGATGACACCCTTGATGATAGCAGTTCACAATGCTCGTCGACATCGGGAACGTACTCCAACTTCAATTACATCAGCAACGACGAGTACGAAACCAGTTCGATTCGAACAGATCAACATAAGATTCACAACTCCTCGAGATTTTGTCCCATTGAGAACCGGAAAAACAAGGATTTCATGGGTGGAGTTTTGTACAAAACGAGCCAATGTGCGGTCGGGGCGTCTCAAGGAGCAGCGTCTGGTCGGAAGGACAAGAGAGGAGGAACGGATGGGCGTAGATTAACAAGAAACAGGTCACTAGTTGATGTACACAGCCAATTGTTGCATCTTTCGTTGGTCGAGGAAGTGAATAGAAGACGGTTATTCAAGACGGTCGGAGCGGTTGAAAGCATCGGTTTTCAAGCGCCTTGTGAGGTTTCTTCGAGCAGCAAAAGGGTGTCGAGTAGGCAAGCGATCGGGAACCGAAGTAGCAATGTAACGAGAACGAGAAGAAATGGTGATACTAGGCAAGATGTTTGGAAGAGAACATGA | 1026 | 45.71 | MFKNSKSEYGYVETDPTSRYGRFEEVLGKGAMKTVYKAIDEFLGIEVAWSRVKLNEVLRSPEDLQRLYSEVHLLSTLKHESIMQFYTSWIDVDHKTFNFITELFTSGTLREYGKRYSQVDIRAIKSWARQILLGLVYLHEHDPPIIHRDLKCDNIFVNGHLGQVKIDDTLDDSSSQCSSTSGTYSNFNYISNDEYETSSIRTDQHKIHNSSRFCPIENRKNKDFMGGVLYKTSQCAVGASQGAASGRKDKRGGTDGRRLTRNRSLVDVHSQLLHLSLVEEVNRRRLFKTVGAVESIGFQAPCEVSSSSKRVSSRQAIGNRSSNVTRTRRNGDTRQDVWKRT | 341 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 6540824 | 6544731 | - | Cp4.1LG05g10000.1 | Cpe05g01001 | 470206 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe05g01001 | 341 | PANTHER | SERINE/THREONINE-PROTEIN KINASE WNK4-RELATED | 167 | 328 | - | - | |
Cpe05g01001 | 341 | PANTHER | SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED | 4 | 168 | - | - | |
Cpe05g01001 | 341 | MobiDBLite | consensus disorder prediction | 327 | 341 | - | - | |
Cpe05g01001 | 341 | SMART | serkin_6 | 21 | 296 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe05g01001 | 341 | ProSiteProfiles | Protein kinase domain profile. | 21 | 341 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe05g01001 | 341 | Pfam | Protein kinase domain | 24 | 168 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe05g01001 | 341 | Gene3D | Phosphorylase Kinase; domain 1 | 5 | 102 | - | - | |
Cpe05g01001 | 341 | Gene3D | Transferase(Phosphotransferase) domain 1 | 104 | 205 | - | - | |
Cpe05g01001 | 341 | PANTHER | SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED | 167 | 328 | - | - | |
Cpe05g01001 | 341 | SUPERFAMILY | Protein kinase-like (PK-like) | 15 | 168 | IPR011009 | - | |
Cpe05g01001 | 341 | MobiDBLite | consensus disorder prediction | 309 | 326 | - | - | |
Cpe05g01001 | 341 | MobiDBLite | consensus disorder prediction | 309 | 341 | - | - | |
Cpe05g01001 | 341 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 145 | 157 | IPR008271 | GO:0004672|GO:0006468 | |
Cpe05g01001 | 341 | PANTHER | SERINE/THREONINE-PROTEIN KINASE WNK4-RELATED | 4 | 168 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe05g01001 | Cpe16g00685 | CCT | |
Cpe05g01001 | Cpe16g00685 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe05g01001 | Cpe-Chr5:6540824 | Cpe09g01001 | Cpe-Chr9:8877785 | 1.91E-77 | dispersed | |
Cpe10g00999 | Cpe-Chr10:5691363 | Cpe05g01001 | Cpe-Chr5:6540824 | 7.99E-09 | wgd | |
Cpe16g00685 | Cpe-Chr16:7098204 | Cpe05g01001 | Cpe-Chr5:6540824 | 7.59E-161 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
62431 | PF00069 | Pkinase | 2.70E-24 | CL0016 | Cpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe05g01001 | K08867 | - | csv:101203757 | 313.538 |