Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe05g01003 ATGCAAGATCCAGCGTCTTCAAACCCTATCCACACTCCCAATTCCAATCAAATTCCTCCCTTCGATGTTGCACCGCCGCCGAAGACTCATAAACCGCCGCCGGTGGTGAACGCGACGGCTTCCTCATCCATGTTTGCCAATGCGAATGCTGGAAATGCCTCGTTTGTGCCTAGAGGTGGTTCACATCATCGGAGGGCTCATTCGGAAGTTAGCTTCCGATTGACGGAGGACATTATGGATCTCTCCGGTTCGGATCCGTTCAACGGCGGTTCGTCAACGGCTAGTCTGGAGGAGATCGGATCGGAGGATGATCTGTTTTCGACCTACATTGATGTGAAGAAGCTTGGAGGTAATGGAGGAGGGAATTTCGTGGATCAAAATGCCAATGGCGGAAGTGAAGGCGCCGGTGGTAGTGAGGGGGAGAAGACTCCGAAGCCAAGGCATCGACATAGCTTATCGGTGGATGGAACGACGTCGTCATCGAGTATGTTTGGGGAGGTTATGGAAGCGAAGAAAGCTATGCCTCCGGATAAATTGGCTGAGCTTTGGAGCAGTGACCCCAAACGCGCCAAGAGGATATTAGCAAATCGACAGTCTGCTGCTCGCTCAAAAGAGAGGAAGGCACGGTATATACAAGAGTTGGAGCGCAAGGTGCAGACCCTTCAAACAGAAGCAACTACTCTATCAGCCCAATTGACTTTGTTCCAGCGAGATACAAGGGGTCTCAGTAACGAGAATACAGAGCTTAAGCTTCGGTTACAAGCTATGGAGCAACAAGCACAATTGCGTGATGCTCTAAACGATGCATTAAAGAAGGAAGTCGAGAGGCTTAAATTCGCTACCGGGGAAATGATGAGCCCTTCCGAGTCTTTTAACTTGGGAATGCATCACATGGCATATGCCCCATCGTCTTTTGTTCAACTTTCACAGCAACCAGCAGGTCCTCAGAATATGCAAATGCCACCATATAGCCATTCCCCATCTAACATGTCTAGCCACCCTATGCATCCATCAGATTCTCATTCTCTATCGGAGGTTCTGCAGAGCGACCCTCTCGGCCGATTACAGGGTCTAGACATCAGTAGTAAAGGATCGTCGCTAGTGAAATCTGAGGTCCCCTCAATCTCTGCAAGTGAGAGCAGTACAACTTTTTGA 1155 49.61 MQDPASSNPIHTPNSNQIPPFDVAPPPKTHKPPPVVNATASSSMFANANAGNASFVPRGGSHHRRAHSEVSFRLTEDIMDLSGSDPFNGGSSTASLEEIGSEDDLFSTYIDVKKLGGNGGGNFVDQNANGGSEGAGGSEGEKTPKPRHRHSLSVDGTTSSSSMFGEVMEAKKAMPPDKLAELWSSDPKRAKRILANRQSAARSKERKARYIQELERKVQTLQTEATTLSAQLTLFQRDTRGLSNENTELKLRLQAMEQQAQLRDALNDALKKEVERLKFATGEMMSPSESFNLGMHHMAYAPSSFVQLSQQPAGPQNMQMPPYSHSPSNMSSHPMHPSDSHSLSEVLQSDPLGRLQGLDISSKGSSLVKSEVPSISASESSTTF 384
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 6554341 6557153 - Cp4.1LG05g09970.1 Cpe05g01003 470208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe05g01003 384 SUPERFAMILY Leucine zipper domain 188 239 IPR046347 GO:0003700|GO:0006355
Cpe05g01003 384 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 186 249 IPR004827 GO:0003700|GO:0006355
Cpe05g01003 384 CDD bZIP_plant_RF2 189 238 IPR044759 GO:0003700|GO:0006355
Cpe05g01003 384 Coils Coil 239 259 - -
Cpe05g01003 384 MobiDBLite consensus disorder prediction 308 384 - -
Cpe05g01003 384 MobiDBLite consensus disorder prediction 117 161 - -
Cpe05g01003 384 MobiDBLite consensus disorder prediction 1 18 - -
Cpe05g01003 384 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 4 381 - -
Cpe05g01003 384 MobiDBLite consensus disorder prediction 1 41 - -
Cpe05g01003 384 MobiDBLite consensus disorder prediction 308 349 - -
Cpe05g01003 384 MobiDBLite consensus disorder prediction 19 33 - -
Cpe05g01003 384 MobiDBLite consensus disorder prediction 359 384 - -
Cpe05g01003 384 SMART brlzneu 184 248 IPR004827 GO:0003700|GO:0006355
Cpe05g01003 384 Pfam bZIP transcription factor 188 236 IPR004827 GO:0003700|GO:0006355
Cpe05g01003 384 Gene3D - 187 239 - -
Cpe05g01003 384 PANTHER ATBZIP TRANSCRIPTION FACTOR 4 381 - -
Cpe05g01003 384 Coils Coil 204 231 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe02g01122 Cpe05g01003 CCT
Cpe05g01003 Cpe16g00688 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g00094 Cpe-Chr4:857097 Cpe05g01003 Cpe-Chr5:6554341 9.47E-49 dispersed
Cpe05g01003 Cpe-Chr5:6554341 Cpe15g00569 Cpe-Chr15:6498133 5.79E-50 dispersed
Cpe08g00112 Cpe-Chr8:722843 Cpe05g01003 Cpe-Chr5:6554341 1.34E-45 dispersed
Cpe01g02113 Cpe-Chr1:17875949 Cpe05g01003 Cpe-Chr5:6554341 4.88E-47 transposed
Cpe02g00891 Cpe-Chr2:6348025 Cpe05g01003 Cpe-Chr5:6554341 2.99E-54 transposed
Cpe02g01122 Cpe-Chr2:10238148 Cpe05g01003 Cpe-Chr5:6554341 3.54E-153 transposed
Cpe06g00883 Cpe-Chr6:5855265 Cpe05g01003 Cpe-Chr5:6554341 5.30E-58 transposed
Cpe01g00086 Cpe-Chr1:517656 Cpe05g01003 Cpe-Chr5:6554341 1.19E-64 wgd
Cpe16g00688 Cpe-Chr16:7121247 Cpe05g01003 Cpe-Chr5:6554341 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
49558 PF00170 bZIP_1 3.60E-08 CL0018 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe05g01003 - - csv:101205663 583.948