Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe05g01008 ATGGATCTCCTCCTCCTGGAGAAGACTCTAGTCGGTCTCTTCGTCGCGGTGGTTCTCGCCATCGCCATTTCCAAACTTCGAGGCAAGCGGTTCAAGCTTCCGCCAGGGCCATTGCCGGTGCCGATCTTTGGTAACTGGCTCCAGGTCGGCGATGACTTGAATCACCGAAATCTGACGGATCTCGCCAAGAAATTTGGAGATATCTTCTTGCTTCGGATGGGACAGAGGAACCTCGTGGTGGTCTCCTCGCCGGAACTGGCTAAGGAGGTGCTCCATACTCAGGGAGTCGAATTTGGATCTAGAACCAGAAACGTTGTCTTCGATATCTTCACTGGAAAAGGTCAGGATATGGTTTTCACTGTCTATGGTGAGCACTGGAGGAAAATGAGACGGATAATGACGGTTCCGTTTTTCACTAACAAAGTGGTACAACAATACCGTTACGGATGGGAGTACGAGGCCGCAAGCGTTGTGGAGGACGTGAAGAAGAATCCAGAATCGGCGACGAGTGGAATCGTTCTCCGGAGGCGGTTACAGCTAATGATGTACAACAATATGTACAGGATTATGTTCGATAGAAGATTTGAGAGTGAGGACGATCCTCTGTTTCAGAAACTTAGGGCTCTGAACGGAGAGAGGAGCCGATTGGCGCAGAGCTTCGATTACAACTATGGCGATTTCATCCCGATTTTGAGGCCATTCTTGAGAGGTTATCTCAAAATCTGCAAGGAAGTTAAGGAAACAAGGCTCAAACTATTCAAGGACTATTTCGTCGAGGAGAGGAAGAAATTGGCGAACACAAAGAGCACATCAAACGAGGGATTGAAATGTGCAATTGATCACATATTGGATGCTCAACAGAAAGGAGAAATCAACGAAGACAATGTCCTTTACATTGTTGAGAACATCAATGTTGCAGCTATCGAAACAACATTATGGTCCATTGAATGGGGCATTGCGGAGTTGGTAAACCACCCTGAAATTCAAAGGAAGTTGAGGAATGAGCTTGACACTGTACTTGGAGTTGATGTCCCGATCACTGAGCCCGACACCCACAAGCTGCCTTACCTGCAGGCTGTGATCAAGGAAACTCTCCGCCTTCGGATGGCCATCCCATTGCTTGTGCCGCATATGAACCTCCATGATGCGAAGCTTGGGGGTTACGACATTCCAGCTGAGAGCAAGATCTTAGTGAATGCCTGGTGGCTAGCCAACAACCCCGCCAACTGGAAGGACCCTGAAGTGTTCCGCCCTGAGAGGTTCTTGGAGGAGGAGTCGAAGGTTGAGGCCAACGGCAACGACTTCCGATACCTTCCCTTTGGCGTTGGTAGAAGAAGTTGCCCTGGCATCATCTTGGCTCTGCCTATCCTTGGCATTACAATTGGACGTTTGATTCAAAACTTCGAGCTGCTTCCTCCTCCTGGACACTCCAAGTTGGACACCTCAGAGAAAGGCGGCCAATTCAGCTTGCACATTTTGAAGCACTCCACCATTGTTGCCAAGCCAAGAGTGTTCTAG 1518 49.01 MDLLLLEKTLVGLFVAVVLAIAISKLRGKRFKLPPGPLPVPIFGNWLQVGDDLNHRNLTDLAKKFGDIFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRYGWEYEAASVVEDVKKNPESATSGIVLRRRLQLMMYNNMYRIMFDRRFESEDDPLFQKLRALNGERSRLAQSFDYNYGDFIPILRPFLRGYLKICKEVKETRLKLFKDYFVEERKKLANTKSTSNEGLKCAIDHILDAQQKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQRKLRNELDTVLGVDVPITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWWLANNPANWKDPEVFRPERFLEEESKVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLIQNFELLPPPGHSKLDTSEKGGQFSLHILKHSTIVAKPRVF 505
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 6583295 6586263 - Cp4.1LG05g10140.1 Cpe05g01008 470213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe05g01008 505 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe05g01008 505 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe05g01008 505 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe05g01008 505 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe05g01008 505 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe05g01008 505 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe05g01008 505 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe05g01008 505 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe05g01008 505 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe05g01008 505 Gene3D Cytochrome P450 21 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe05g01008 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Cpe05g01008 505 Pfam Cytochrome P450 34 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe05g01008 505 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 1 505 - -
Cpe05g01008 505 SUPERFAMILY Cytochrome P450 34 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe05g01008 505 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe05g01008 505 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe05g01008 505 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe05g01008 505 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 1 505 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe05g01008 Cpe16g00690 CCT
Cpe02g01119 Cpe05g01008 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g01008 Cpe-Chr5:6583295 Cpe11g00652 Cpe-Chr11:4321028 0 dispersed
Cpe02g01119 Cpe-Chr2:10217737 Cpe05g01008 Cpe-Chr5:6583295 0 transposed
Cpe16g00690 Cpe-Chr16:7138988 Cpe05g01008 Cpe-Chr5:6583295 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe05g01008 K00487 - csv:101221846 964.526