Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cpe05g01020 | ATGTCACTGCCATGGTGGTCCTCCGCCACTGCCCTTCCCTCTCCCCCTCATACTCGGCTGATTAATCACCATTGCAATCGTCTCCTCCACTCTTACATTCGTCTCGTAAAATCAAAATCAAGCCCTTCTACTTTGAAATCCACCGCTCCGAGAGCTTTATTGCTTGACGAATTCATTCAACTCAGCCACAACAAGGTTTTAGTTGCCGCCGGCGTGTCCGCTGCGATTGGGCAACTCGCGAAGCCTTTCACTTCTGTTCTTTTTTATGGCAGAGAGTTCAACTTTAGAACTGCCTTTGGAGCTGGAGGCTTCCCTTCTACTCACTCCTCTGCGGTGGTCGCCGCTGCCACTATTCTCGGCGTTGAGAGGGGTCTTGCAGATTCAATTTTTGGCATAACTGGAGTCAGAAGAGAAGTTGGAAAACATGCTAAAGCAATCAACACGCTATTGCAAACAAACACACCTGTGAACTCATCCTTTTCCTATAAAGATCAGGATCGTCGACTCAACTCGCAACTCGAGAGCAGCAGTCCCCTGTTATCTGAGGAAGGAACCAGGGCCTTGACGGTACTGAGTCCATTAAAGGAGGAGGATATCGCATCGTCGAGCTCGGAAACTGATGTGGAAGAAGGGTCAAGAAGGGAGGGCAGTGAATGGAAGTCATTCAAAGAAGCAATAGGCCACACTGAGATTGAAGTTGCAGCTGGTGCTTTCTTGGGTTTCACGGTTAGTCTGATAACTAATACATTATTGTGA | 756 | 48.15 | MSLPWWSSATALPSPPHTRLINHHCNRLLHSYIRLVKSKSSPSTLKSTAPRALLLDEFIQLSHNKVLVAAGVSAAIGQLAKPFTSVLFYGREFNFRTAFGAGGFPSTHSSAVVAAATILGVERGLADSIFGITGVRREVGKHAKAINTLLQTNTPVNSSFSYKDQDRRLNSQLESSSPLLSEEGTRALTVLSPLKEEDIASSSSETDVEEGSRREGSEWKSFKEAIGHTEIEVAAGAFLGFTVSLITNTLL | 251 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 6653297 | 6657937 | - | Cp4.1LG05g10180.1 | Cpe05g01020 | 470225 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cpe05g01020 | 251 | Pfam | Divergent PAP2 family | 63 | 243 | IPR003832 | - | |
| Cpe05g01020 | 251 | PANTHER | ACID PHOSPHATASE/VANADIUM-DEPENDENT HALOPEROXIDASE-RELATED PROTEIN | 27 | 250 | IPR003832 | - | |
| Cpe05g01020 | 251 | MobiDBLite | consensus disorder prediction | 198 | 218 | - | - | |
| Cpe05g01020 | 251 | PANTHER | ACID PHOSPHATASE/VANADIUM-DEPENDENT HALOPEROXIDASE-RELATED PROTEIN | 27 | 250 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cpe05g01005 | Cpe-Chr5:6569576 | Cpe05g01020 | Cpe-Chr5:6653297 | 1.05E-93 | dispersed | |
| Cpe05g01006 | Cpe-Chr5:6570751 | Cpe05g01020 | Cpe-Chr5:6653297 | 4.31E-73 | dispersed | |
| Cpe05g01020 | Cpe-Chr5:6653297 | Cpe03g01789 | Cpe-Chr3:13460779 | 7.36E-07 | dispersed | |
| Cpe05g01020 | Cpe-Chr5:6653297 | Cpe09g00573 | Cpe-Chr9:3961304 | 3.28E-09 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cpe05g01020 | - | - | csv:101219161 | 315.849 |