Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe05g01021 CAAGAAATCGTGAGGCTGGATCTGATACACCGCCACCATCCGGAAGTGGTTAAGAGGCTTCATGATGAAATTAAGGTGGATAAAATGGAGGATCGCATCAAGGATATTCGCTATCACGATCAATCTCGCCTGCGAGCCATCTCCGCCCACCTGAATTGGACCAAAGTTGTGGAGAATGCGGAGGAGAAGGAGAAGAAGGAGGCGTCGGGTTCGAATCTTCCTCCACAGTCGCAGTCGCCAATAGCATTGAAAACATACCCCGGCGCTGATTACGGTAGCAGTGAGTTTTTCGTGCAATTGAAATTGGGAACGCCGCCGCAGAAGTTCACGATGATTGCAGATACCGGAAGTGACCTATTGTGGACGAGATGCAGATACCGGCGGTGCAGGGGAGATTGCAGCAACCCCTCTCCGATCCATAAAATGCGTAACAGAATGAGAGATAGATTCATTTACGCGCTTTATGCGAATCAATCATCTTCTTTCTCCCCAATTCCTTGTTCCTCCGAGCAGTGTATCCAGGATTTCTCTGAGCTCGGCGGCCAACCCGATTGTCCAACCCCTAACTCCCCTTGTTCCTATACCTACAGCTACTTAAGTGGGGACTGCGCGATGGGAATATTCGCAACTGAGACGGTAACGGTAAGACTAACAAACGGAAAAGAAAAGCAACTGAAGGACATTCTATACGGCTGCACCGAAGAAATAACTGACAGCAAATTCTTGGACGGAGCCGATGGCCTCATTGGCTTAGGCTCTAGCATCTACTCCTTCGTCTACAAAGCCGCCGAAAACAACATCGGCGGCGGCTTCTCCTACTGCCTCGCCGACCACATCCGCAGTATAACCGCCATTAGCTACTTCGTCTTCGGCACCCCCTCCCCTAAGACCTTCGCCGCCTCCACATCCACTCCCATCGGCCCCCCCGCCACCACTAAACTCATCACCGGCGGGCGATACAGCTGCTACTACGGCGTCCAACTGGCCGGAATCTCCGTCGACGGACAGATCCTGAACATCCCCCCTCACGTCTGGAACATCAATTCCGGTTGCGGCACCATCTTGGACACGGGCACCAGCCTGACGATGCTGACGGCGCCGGCTCACGATGCGGTGATAGAAGCGATGGCTCCGAAGATCGAAAAATTCGGAAGAATGGAAAGGGATGTAAAGGGTGAAAGGGAGAAGAACTTCAAACTTTGCTTCAATGACACTGAGTGGAGATTTGGTATGACGCCGAAGCTTGGATTCCATTTCGAAGGCGGGGTGGTGTTCGAACCGCCGGATAGGAGCTACGTCGTTCCGGCGTCAGAACAATGTAGCTGTATTGCCATAACTTCTCTGCCCTTTCCATCAATCAATATCTTAGGGAATATTATTCAGCAAACTTACCTTTGGCAATTTGATTTACACAAGGGATCCGTCACTTTTGCTCCCTCCGACTGCGCCTAG 1452 51.58 QEIVRLDLIHRHHPEVVKRLHDEIKVDKMEDRIKDIRYHDQSRLRAISAHLNWTKVVENAEEKEKKEASGSNLPPQSQSPIALKTYPGADYGSSEFFVQLKLGTPPQKFTMIADTGSDLLWTRCRYRRCRGDCSNPSPIHKMRNRMRDRFIYALYANQSSSFSPIPCSSEQCIQDFSELGGQPDCPTPNSPCSYTYSYLSGDCAMGIFATETVTVRLTNGKEKQLKDILYGCTEEITDSKFLDGADGLIGLGSSIYSFVYKAAENNIGGGFSYCLADHIRSITAISYFVFGTPSPKTFAASTSTPIGPPATTKLITGGRYSCYYGVQLAGISVDGQILNIPPHVWNINSGCGTILDTGTSLTMLTAPAHDAVIEAMAPKIEKFGRMERDVKGEREKNFKLCFNDTEWRFGMTPKLGFHFEGGVVFEPPDRSYVVPASEQCSCIAITSLPFPSINILGNIIQQTYLWQFDLHKGSVTFAPSDCA 483
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 6657366 6658920 + Cp4.1LG05g10090.1 Cpe05g01021 470226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe05g01021 483 Gene3D Acid Proteases 77 291 IPR021109 -
Cpe05g01021 483 Gene3D Acid Proteases 308 483 IPR021109 -
Cpe05g01021 483 ProSiteProfiles Peptidase family A1 domain profile. 96 478 IPR033121 -
Cpe05g01021 483 MobiDBLite consensus disorder prediction 62 84 - -
Cpe05g01021 483 PRINTS Pepsin (A1) aspartic protease family signature 102 122 IPR001461 GO:0004190|GO:0006508
Cpe05g01021 483 PRINTS Pepsin (A1) aspartic protease family signature 353 364 IPR001461 GO:0004190|GO:0006508
Cpe05g01021 483 PRINTS Pepsin (A1) aspartic protease family signature 454 469 IPR001461 GO:0004190|GO:0006508
Cpe05g01021 483 Pfam Xylanase inhibitor C-terminal 324 478 IPR032799 -
Cpe05g01021 483 CDD pepsin_A_like_plant 95 482 IPR034161 -
Cpe05g01021 483 SUPERFAMILY Acid proteases 88 482 IPR021109 -
Cpe05g01021 483 PANTHER ASPARTIC PROTEINASE NANA, CHLOROPLAST 4 482 - -
Cpe05g01021 483 PANTHER OS07G0603500 PROTEIN-RELATED 4 482 - -
Cpe05g01021 483 Pfam Xylanase inhibitor N-terminal 96 291 IPR032861 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe05g01021 Cpe16g00700 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g01021 Cpe-Chr5:6657366 Cpe13g00033 Cpe-Chr13:270438 1.77E-53 dispersed
Cpe05g01007 Cpe-Chr5:6577056 Cpe05g01021 Cpe-Chr5:6657366 0 transposed
Cpe16g00700 Cpe-Chr16:7204525 Cpe05g01021 Cpe-Chr5:6657366 2.76E-107 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe05g01021 - - csv:101204452 494.967