Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe05g01029 ATGACTATGACGGTCGCCGCAAGAGCAATCGCAACGGCTCGATCAGTGGTGCGAGCGAGCAGGCTCCGTAATGTGTTTACTGCGCAGAAATCTCAGTCTCACGCTCTTCTCATTCGTCAGATGAGCTCGGAGGCGCAGAGTATGCGCTCCGAGGAGCAGAGCATGAGCTCGGAGGTGCAGAGCATCGCCGCTCGTCTTCGTAATTCTGGATTGTTACGAAGCCAAGGCCTCATTGGCGGCCAGTGGATTGATGCTTACGATGGGAGGACCATTAAGGTTCATAATCCAGCAAATGGTGAAGTTATAGCCAATGTCCCTCTCATGAGCAAAAGGGAGACAGATGATGCTATTACTTCAGCTTATGATGCTTTTAAGTCTTGGAGCAAGCTCACTGCAGCTGATCGGAGTAATCGCTTACGTAAATGGTACGAGCTTCTAACTACCCACAAAGAAGAGATTGGACAATTGATAACCTTAGAGCAAGGCAAACCATTAAAGGAATCAGTGGGTGAGCCAGTTGGAGTTGTTGGTGTTATTACCCCTTGGAACTTTCCGTTGGCTATGATTACACGGAAGGTTGCACCTGCTCTTGCATGTGGTTGTACGGTGGTCATAAAACCCTCTGAACTTACTCCCTTGACAGCTTTAGCAGCAGCTGAGCTCTCACTGCAAGCTGGAATTCCCCCAGGTGTAGTGAATGTGGTTATGGGAGATGCTCCTGCTATTGGGGATGCTATACTTGCAAGTACACAGGTTAGAAAAATCACGTTTACTGGCTCAACAACAGTTGGAAAAAAATTGATGGCTGGAGCTGCTGGGACTGTTAAAAAGGTGTCCTTAGAACTTGGGGGTAATGCACCTCACATAGTCTTTGATGATGCAGATGTGGATGTTGCAGTAAAAGGAGTTATTGCATCGAAGTTTCGGAATAGTGGACAGACTTGTGTTTCTGCCAATAGGATTCTTGTTCAAGAAGGCATATACGAGAAATTTTGTAATGCTTTCTCAAAAGCTGCGCAAGATCTGCAAGTTGGTGATGGGTTTGGTGAAGGTGTTGCTCAGGGTCCTTTGATTAATGAAGCTGCCGTGCAGAAGGTTTGTTTTGTTTTCATCACGTTGAGAAATTTCTTCAAGATGCCATCACAAAGAACAGAGGAGGAAGCAATTGGTCTCGCTAATGACGCCAATGCAGGATTAGCTGCTTGCGTATACACAAATAATATTCAACGTTCATGGAGAATGACTGAAGCTCTTGAATATGGAATGGTTGGTGTTAATGAAAGCCTAATTGCTACAGAGGTGGCTCCATTTGGTGGCATTAAACAGTCAGGCCTTGGTCGGGAAGGATCCAAATATGGGATGGACGATTATCTTGAGCTGAAATACGTTTGTTTGGGGAATATGGACGGCAACTGA 1416 45.9 MTMTVAARAIATARSVVRASRLRNVFTAQKSQSHALLIRQMSSEAQSMRSEEQSMSSEVQSIAARLRNSGLLRSQGLIGGQWIDAYDGRTIKVHNPANGEVIANVPLMSKRETDDAITSAYDAFKSWSKLTAADRSNRLRKWYELLTTHKEEIGQLITLEQGKPLKESVGEPVGVVGVITPWNFPLAMITRKVAPALACGCTVVIKPSELTPLTALAAAELSLQAGIPPGVVNVVMGDAPAIGDAILASTQVRKITFTGSTTVGKKLMAGAAGTVKKVSLELGGNAPHIVFDDADVDVAVKGVIASKFRNSGQTCVSANRILVQEGIYEKFCNAFSKAAQDLQVGDGFGEGVAQGPLINEAAVQKVCFVFITLRNFFKMPSQRTEEEAIGLANDANAGLAACVYTNNIQRSWRMTEALEYGMVGVNESLIATEVAPFGGIKQSGLGREGSKYGMDDYLELKYVCLGNMDGN 471
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 6743169 6759278 - Cp4.1LG05g10320.1 Cpe05g01029 470234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe05g01029 471 Pfam Aldehyde dehydrogenase family 383 463 IPR015590 GO:0016491
Cpe05g01029 471 Pfam Aldehyde dehydrogenase family 171 366 IPR015590 GO:0016491
Cpe05g01029 471 Pfam Aldehyde dehydrogenase family 82 170 IPR015590 GO:0016491
Cpe05g01029 471 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 280 287 IPR029510 GO:0016491
Cpe05g01029 471 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 376 439 IPR016163 GO:0016620
Cpe05g01029 471 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 170 469 IPR016162 GO:0016491
Cpe05g01029 471 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 170 366 - -
Cpe05g01029 471 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 69 171 - -
Cpe05g01029 471 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 65 169 IPR016162 GO:0016491
Cpe05g01029 471 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 170 366 - -
Cpe05g01029 471 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 383 468 - -
Cpe05g01029 471 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 69 171 - -
Cpe05g01029 471 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 383 468 - -
Cpe05g01029 471 SUPERFAMILY ALDH-like 71 467 IPR016161 GO:0016491
Cpe05g01029 471 CDD ALDH_F5_SSADH_GabD 93 465 - -
Cpe05g01029 471 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 285 370 IPR016163 GO:0016620
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe05g01029 Cpe16g00704 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g01029 Cpe-Chr5:6743169 Cpe07g00001 Cpe-Chr7:393 1.64E-79 dispersed
Cpe16g00704 Cpe-Chr16:7228718 Cpe05g01029 Cpe-Chr5:6743169 1.52E-73 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe05g01029 K17761 - csv:101217352 647.121